RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 DMGDHQ9UI17 866 aaKnown RBP3.81□□□□□ -1.8
CALD1-216ENST00000473714 PHLPP1O60346 1717 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 BIVM-ERCC5R4GMW8 1640 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 MED14O60244 1454 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 EP400Q96L91 3159 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 BLMP54132 1417 aaPredicted RBP3.8□□□□□ -1.8
CALD1-216ENST00000473714 ZMYM3Q14202 1370 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 M0R2N6 131 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 PRRG2O14669 202 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 INPP5BP32019 993 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 IDH3AP50213 366 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 ARSDP51689 593 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 CPSF6Q16630 551 aaKnown RBP eCLIP3.8□□□□□ -1.8
CALD1-216ENST00000473714 LILRA6Q6PI73 481 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 DEFB132Q7Z7B7 95 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 ANKLE2Q86XL3 938 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 FBXL6Q8N531 539 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 TSEN2Q8NCE0 465 aaKnown RBP3.8□□□□□ -1.8
CALD1-216ENST00000473714 GAS2L2Q8NHY3 880 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 ADAMTS19Q8TE59 1207 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 SLC38A3Q99624 504 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 C2orf49Q9BVC5 232 aaPredicted RBP3.8□□□□□ -1.8
CALD1-216ENST00000473714 GZF1Q9H116 711 aaPredicted RBP3.8□□□□□ -1.8
CALD1-216ENST00000473714 ALG2Q9H553 416 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 BSDC1Q9NW68 430 aaPredicted RBP3.8□□□□□ -1.8
CALD1-216ENST00000473714 KCNK4Q9NYG8 393 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 TRIM33Q9UPN9 1127 aa3.8□□□□□ -1.8
CALD1-216ENST00000473714 RBM19Q9Y4C8 960 aaKnown RBP3.8□□□□□ -1.8
CALD1-216ENST00000473714 NCANO14594 1321 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 POM121CA8CG34 1229 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 COL19A1Q14993 1142 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 ANKRD34AQ69YU3 496 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 FAM117BQ6P1L5 589 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.79□□□□□ -1.8
CALD1-216ENST00000473714 NFATC2IPQ8NCF5 419 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 FLCNQ8NFG4 579 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 UCN2Q96RP3 112 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 BCS1LQ9Y276 419 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 HIF3AQ9Y2N7 669 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 REREQ9P2R6 1566 aa3.79□□□□□ -1.8
CALD1-216ENST00000473714 NPHP4O75161 1426 aaPredicted RBP3.78□□□□□ -1.8
CALD1-216ENST00000473714 MROH2AA6NES4 1674 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 DNMT1P26358 1616 aaKnown RBP3.78□□□□□ -1.8
CALD1-216ENST00000473714 KDM5CP41229 1560 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 CFAP74Q9C0B2 1584 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 USP17L3A6NCW0 530 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 USP17L4A6NCW7 530 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 B8ZZF3 427 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 GAS2O43903 313 aaKnown RBP3.78□□□□□ -1.8
CALD1-216ENST00000473714 LGR5O75473 907 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 PAPLNO95428 1278 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 F13BP05160 661 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 HSPA6P17066 643 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 USP17L2Q6R6M4 530 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 USP17L1Q7RTZ2 530 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 KLHL23Q8NBE8 558 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 SCG3Q8WXD2 468 aaKnown RBP3.78□□□□□ -1.8
CALD1-216ENST00000473714 PBXIP1Q96AQ6 731 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 ZNF594Q96JF6 807 aaPredicted RBP3.78□□□□□ -1.8
CALD1-216ENST00000473714 NSUN5Q96P11 429 aaKnown RBP3.78□□□□□ -1.8
CALD1-216ENST00000473714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.78□□□□□ -1.8
CALD1-216ENST00000473714 A2ML1A8K2U0 1454 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 LRRC9Q6ZRR7 1453 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 SCAF11Q99590 1463 aaKnown RBP3.78□□□□□ -1.8
CALD1-216ENST00000473714 RTEL1-TNFRSF6BF6WH68 1400 aa3.78□□□□□ -1.8
CALD1-216ENST00000473714 COL16A1Q07092 1604 aaPredicted RBP3.77□□□□□ -1.81
CALD1-216ENST00000473714 NINLQ9Y2I6 1382 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 KDM5DQ9BY66 1539 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 UGGT2Q9NYU1 1516 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 FSCN2O14926 492 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 CYP26A1O43174 497 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 DKK1O94907 266 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 LMOD1P29536 600 aaPredicted RBP3.77□□□□□ -1.81
CALD1-216ENST00000473714 CDC27P30260 824 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 PREPP48147 710 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 SF3B2Q13435 895 aaKnown RBP3.77□□□□□ -1.81
CALD1-216ENST00000473714 FDX2Q6P4F2 183 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 TXNDC11Q6PKC3 985 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 NFXL1Q6ZNB6 911 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 OGFOD1Q8N543 542 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 METTL22Q9BUU2 404 aaPredicted RBP3.77□□□□□ -1.81
CALD1-216ENST00000473714 ATP10BO94823 1461 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 CHD4Q14839 1912 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 SHPRHQ149N8 1683 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 CAMTA1Q9Y6Y1 1673 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 SCAPERQ9BY12 1400 aa3.77□□□□□ -1.81
CALD1-216ENST00000473714 IQGAP1P46940 1657 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.76□□□□□ -1.81
CALD1-216ENST00000473714 PALM3A6NDB9 673 aaPredicted RBP3.76□□□□□ -1.81
CALD1-216ENST00000473714 MMP20O60882 483 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 XYLBO75191 536 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 MICAL2O94851 1124 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 EGFRP00533 1210 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 MAP4P27816 1152 aaKnown RBP3.76□□□□□ -1.81
CALD1-216ENST00000473714 CDC25BP30305 580 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 SOX18P35713 384 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 CDCA8Q53HL2 280 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 LARGE2Q8N3Y3 721 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 CARD10Q9BWT7 1032 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 LACRTQ9GZZ8 138 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms