RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TIAM1Q13009 1591 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 ERICH4A6NGS2 130 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 SPATA31C2B4DYI2 1134 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 USP5P45974 858 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 PLA2G4AP47712 749 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 DNM1Q05193 864 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 TRDNQ13061 729 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 TREML1Q86YW5 311 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 KIF18AQ8NI77 898 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 FAM53CQ9NYF3 392 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 RTEL1-TNFRSF6BF6WH68 1400 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 MRPL58Q14197 206 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 ZSCAN23Q3MJ62 389 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 RPAINQ86UA6 219 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 GPATCH11Q8N954 259 aa6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 MYBBP1AQ9BQG0 1328 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-206ENST00000473684 NEURL4Q96JN8 1562 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 PPP1R12AO14974 1030 aaPredicted RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 LDHBP07195 334 aaKnown RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 CTSOP43234 321 aaPredicted RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 MAPK8P45983 427 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 OTUD6BQ8N6M0 293 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 CXorf56Q9H5V9 222 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 ZDHHC3Q9NYG2 299 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 JRKLQ9Y4A0 524 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 KIF15Q9NS87 1388 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 PRPF40AO75400 957 aaKnown RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 GSCP56915 257 aaPredicted RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 NCBP1Q09161 790 aaKnown RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 TXLNBQ8N3L3 684 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 NIF3L1Q9GZT8 377 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 DEF6Q9H4E7 631 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 A0A1B0GUL7 405 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 RHPN1Q8TCX5 695 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 C22orf23Q9BZE7 217 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 POLMQ9NP87 494 aaPredicted RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 CWC15Q9P013 229 aaKnown RBP6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 SUFUQ9UMX1 484 aa6.12□□□□□ -1.43
TMEM39A-206ENST00000473684 HFM1A2PYH4 1435 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 YEATS2Q9ULM3 1422 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 ATP2B1P20020 1258 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 KLRG1Q96E93 195 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 GPC6Q9Y625 555 aaPredicted RBP6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 VWDEQ8N2E2 1590 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 CEP170BQ9Y4F5 1589 aaPredicted RBP6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 CCDC189A1A4V9 331 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 CAPN5O15484 640 aaPredicted RBP6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 MICAL2O94851 1124 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 PHKA2P46019 1235 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 ANAPC15P60006 121 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 ENOX2Q16206 610 aaKnown RBP6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 LRCH2Q5VUJ6 765 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 LRSAM1Q6UWE0 723 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 PARP2Q9UGN5 583 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 DMGDHQ9UI17 866 aaKnown RBP6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 WWC3Q9ULE0 1092 aa6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 BLMP54132 1417 aaPredicted RBP6.11□□□□□ -1.43
TMEM39A-206ENST00000473684 ALKQ9UM73 1620 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 SAMD9LQ8IVG5 1584 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 TGFBR3LH3BV60 316 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 MAFGO15525 162 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 TPM3P06753 285 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 HIF1AQ16665 826 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 CASC1Q6TDU7 716 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 GPR152Q8TDT2 470 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 AIDAQ96BJ3 306 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 SUSD3Q96L08 255 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 TRERF1Q96PN7 1200 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 SETDB2Q96T68 719 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 LRRC9Q6ZRR7 1453 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 MYO1CO00159 1063 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 SUGP1Q8IWZ8 645 aaKnown RBP6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 JMYQ8N9B5 988 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 ZNF397Q8NF99 534 aaPredicted RBP6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 ITFG2Q969R8 447 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 NUDT16Q96DE0 195 aaKnown RBP6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 DUSP9Q99956 384 aaKnown RBP6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 NOL10Q9BSC4 688 aaKnown RBP6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 GGNBP2Q9H3C7 697 aa6.1□□□□□ -1.43
TMEM39A-206ENST00000473684 DNMT1P26358 1616 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 KLHL33A6NCF5 533 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 FAM177BA6PVY3 158 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 UPP2O95045 317 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 WDR44Q5JSH3 913 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 LDLRAD1Q5T700 205 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 IER5Q5VY09 327 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 ZNF280CQ8ND82 737 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 FAM210AQ96ND0 272 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 RNF19AQ9NV58 838 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 STK26Q9P289 416 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 POLKQ9UBT6 870 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 CGNL1Q0VF96 1302 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 UGGT1Q9NYU2 1555 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 CCDC196A0A1B0GTZ2 297 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 OPLAHO14841 1288 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms