RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 MAST3O60307 1309 aa17.66■□□□□ 0.42
LMNA-213ENST00000473598 GRIN3BO60391 1043 aa17.66■□□□□ 0.42
LMNA-213ENST00000473598 UBE3CQ15386 1083 aa17.66■□□□□ 0.42
LMNA-213ENST00000473598 CCDC129Q6ZRS4 1044 aa17.66■□□□□ 0.42
LMNA-213ENST00000473598 SNED1Q8TER0 1413 aa17.66■□□□□ 0.42
LMNA-213ENST00000473598 OSBP2Q969R2 916 aa17.66■□□□□ 0.42
LMNA-213ENST00000473598 PDE6AP16499 860 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
LMNA-213ENST00000473598 HSPA4P34932 840 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 PRELPP51888 382 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 MAP4K1Q92918 833 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 SLKQ9H2G2 1235 aaPredicted RBP17.65■□□□□ 0.42
LMNA-213ENST00000473598 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 CHD4Q14839 1912 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 M0R2C6 588 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 CCDC93Q567U6 631 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 CD209Q9NNX6 404 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
LMNA-213ENST00000473598 FER1L6Q2WGJ9 1857 aa17.64■□□□□ 0.42
LMNA-213ENST00000473598 MAST2Q6P0Q8 1798 aa17.64■□□□□ 0.41
LMNA-213ENST00000473598 ZNF532Q9HCE3 1301 aa17.64■□□□□ 0.41
LMNA-213ENST00000473598 IL1R1P14778 569 aa17.64■□□□□ 0.41
LMNA-213ENST00000473598 ANAPC15P60006 121 aa17.64■□□□□ 0.41
LMNA-213ENST00000473598 CC2D2BQ6DHV5 1058 aa17.64■□□□□ 0.41
LMNA-213ENST00000473598 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
LMNA-213ENST00000473598 MAGEB6Q8N7X4 407 aa17.64■□□□□ 0.41
LMNA-213ENST00000473598 PUS7LQ9H0K6 701 aaKnown RBP17.64■□□□□ 0.41
LMNA-213ENST00000473598 CHAF1AQ13111 956 aaPredicted RBP17.63■□□□□ 0.41
LMNA-213ENST00000473598 ZC3H12CQ9C0D7 883 aaKnown RBP17.63■□□□□ 0.41
LMNA-213ENST00000473598 PALD1Q9ULE6 856 aa17.63■□□□□ 0.41
LMNA-213ENST00000473598 SALL1Q9NSC2 1324 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 NECTIN1Q15223 517 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 IL17RAQ96F46 866 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 EYA3Q99504 573 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 RBM8AQ9Y5S9 174 aaKnown RBP17.62■□□□□ 0.41
LMNA-213ENST00000473598 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 SOGA3Q5TF21 947 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 WDR66Q8TBY9 1149 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 RTFDC1Q9BY42 306 aaPredicted RBP17.62■□□□□ 0.41
LMNA-213ENST00000473598 COA1Q9GZY4 146 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 RAI14Q9P0K7 980 aa17.62■□□□□ 0.41
LMNA-213ENST00000473598 MTERF4Q7Z6M4 381 aaKnown RBP17.61■□□□□ 0.41
LMNA-213ENST00000473598 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
LMNA-213ENST00000473598 DSCC1Q9BVC3 393 aa17.61■□□□□ 0.41
LMNA-213ENST00000473598 TAOK3Q9H2K8 898 aa17.61■□□□□ 0.41
LMNA-213ENST00000473598 ZNF277Q9NRM2 450 aaPredicted RBP17.61■□□□□ 0.41
LMNA-213ENST00000473598 GPAA1O43292 621 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 RABEP1Q15276 862 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 UTP14CQ5TAP6 766 aaKnown RBP17.6■□□□□ 0.41
LMNA-213ENST00000473598 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 PANK2Q9BZ23 570 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 HSPD1P10809 573 aaKnown RBP17.6■□□□□ 0.41
LMNA-213ENST00000473598 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 KCNB2Q92953 911 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 JAG2Q9Y219 1238 aa17.6■□□□□ 0.41
LMNA-213ENST00000473598 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
LMNA-213ENST00000473598 IGSF3O75054 1194 aa17.59■□□□□ 0.41
LMNA-213ENST00000473598 SPTY2D1Q68D10 685 aaPredicted RBP17.59■□□□□ 0.41
LMNA-213ENST00000473598 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
LMNA-213ENST00000473598 SBF1O95248 1867 aa17.59■□□□□ 0.41
LMNA-213ENST00000473598 PRDX5P30044 214 aa17.59■□□□□ 0.41
LMNA-213ENST00000473598 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
LMNA-213ENST00000473598 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
LMNA-213ENST00000473598 NSUN4Q96CB9 384 aaKnown RBP17.59■□□□□ 0.41
LMNA-213ENST00000473598 CYP7A1P22680 504 aa17.58■□□□□ 0.4
LMNA-213ENST00000473598 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.4
LMNA-213ENST00000473598 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.4
LMNA-213ENST00000473598 SUPT20HQ8NEM7 779 aa17.58■□□□□ 0.4
LMNA-213ENST00000473598 ZNF384Q8TF68 577 aa17.58■□□□□ 0.4
LMNA-213ENST00000473598 AIDAQ96BJ3 306 aa17.58■□□□□ 0.4
LMNA-213ENST00000473598 PSMD1Q99460 953 aa17.58■□□□□ 0.4
LMNA-213ENST00000473598 FAM205AQ6ZU69 1335 aa17.58■□□□□ 0.4
LMNA-213ENST00000473598 MYH2Q9UKX2 1941 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 SLC27A2O14975 620 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 MECOMQ03112 1051 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 C9orf131Q5VYM1 1079 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 NAA16Q6N069 864 aaPredicted RBP17.57■□□□□ 0.4
LMNA-213ENST00000473598 LTBP3Q9NS15 1303 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 FOXP2O15409 715 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 ZKSCAN1P17029 563 aaPredicted RBP17.57■□□□□ 0.4
LMNA-213ENST00000473598 DOK7Q18PE1 504 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 ADGRA1Q86SQ6 560 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 STRBPQ96SI9 672 aaKnown RBP17.57■□□□□ 0.4
LMNA-213ENST00000473598 RNF181Q9P0P0 153 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 COL4A5P29400 1685 aa17.57■□□□□ 0.4
LMNA-213ENST00000473598 G3V3G9 751 aa17.56■□□□□ 0.4
LMNA-213ENST00000473598 CD2BP2O95400 341 aaKnown RBP17.56■□□□□ 0.4
LMNA-213ENST00000473598 LDHBP07195 334 aaKnown RBP17.56■□□□□ 0.4
LMNA-213ENST00000473598 AOC3Q16853 763 aa17.56■□□□□ 0.4
LMNA-213ENST00000473598 DCAF8Q5TAQ9 597 aa17.56■□□□□ 0.4
LMNA-213ENST00000473598 TBC1D22AQ8WUA7 517 aa17.56■□□□□ 0.4
LMNA-213ENST00000473598 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
LMNA-213ENST00000473598 MBD4O95243 580 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 LMNB1P20700 586 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 PODNQ7Z5L7 613 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 TRIM44Q96DX7 344 aaPredicted RBP17.55■□□□□ 0.4
LMNA-213ENST00000473598 SCN9AQ15858 1988 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms