RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542		A6NHS1	94 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	YBX3	P16989	372 aa	Known RBP eCLIP	7.78	□□□□□ -1.16
BBX-223	ENST00000473542	ITGAE	P38570	1179 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	PIP4K2B	P78356	416 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	ANKRD34A	Q69YU3	496 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	XKR5	Q6UX68	686 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	SHISA5	Q8N114	240 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	TTC16	Q8NEE8	873 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	MRRF	Q96E11	262 aa	Known RBP	7.78	□□□□□ -1.16
BBX-223	ENST00000473542	RUSC1	Q9BVN2	902 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	SALL4	Q9UJQ4	1053 aa		7.78	□□□□□ -1.16
BBX-223	ENST00000473542	SGO2	Q562F6	1265 aa		7.77	□□□□□ -1.17
BBX-223	ENST00000473542	PDE12	Q6L8Q7	609 aa	Known RBP	7.77	□□□□□ -1.17
BBX-223	ENST00000473542	ZNF438	Q7Z4V0	828 aa		7.77	□□□□□ -1.17
BBX-223	ENST00000473542	RNF208	Q9H0X6	261 aa		7.77	□□□□□ -1.17
BBX-223	ENST00000473542	DZANK1	Q9NVP4	752 aa		7.77	□□□□□ -1.17
BBX-223	ENST00000473542	PRPF40A	O75400	957 aa	Known RBP	7.76	□□□□□ -1.17
BBX-223	ENST00000473542	ENOX2	Q16206	610 aa	Known RBP	7.76	□□□□□ -1.17
BBX-223	ENST00000473542	ABI1	Q8IZP0	508 aa		7.76	□□□□□ -1.17
BBX-223	ENST00000473542	DNAJC25	Q9H1X3	360 aa		7.76	□□□□□ -1.17
BBX-223	ENST00000473542	OSGEP	Q9NPF4	335 aa		7.76	□□□□□ -1.17
BBX-223	ENST00000473542	KIAA1522	Q9P206	1035 aa	Predicted RBP	7.76	□□□□□ -1.17
BBX-223	ENST00000473542	CABP4	P57796	275 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	ATP2B2	Q01814	1243 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	ALG1L	Q6GMV1	187 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	FDX2	Q6P4F2	183 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	FBF1	Q8TES7	1133 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	WNT8B	Q93098	351 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	GGNBP2	Q9H3C7	697 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	SOX13	Q9UN79	622 aa		7.75	□□□□□ -1.17
BBX-223	ENST00000473542	FAM177B	A6PVY3	158 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	PDE2A	O00408	941 aa	Predicted RBP	7.74	□□□□□ -1.17
BBX-223	ENST00000473542	F13B	P05160	661 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	LDHB	P07195	334 aa	Known RBP	7.74	□□□□□ -1.17
BBX-223	ENST00000473542	CES1	P23141	567 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	MAP4	P27816	1152 aa	Known RBP	7.74	□□□□□ -1.17
BBX-223	ENST00000473542	FBXL6	Q8N531	539 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	NIF3L1	Q9GZT8	377 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	CHRD	Q9H2X0	955 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	IGSF5	Q9NSI5	407 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	PIM2	Q9P1W9	311 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	HIF3A	Q9Y2N7	669 aa		7.74	□□□□□ -1.17
BBX-223	ENST00000473542	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.73	□□□□□ -1.17
BBX-223	ENST00000473542	SOX1	O00570	391 aa	Predicted RBP	7.73	□□□□□ -1.17
BBX-223	ENST00000473542	GAS2	O43903	313 aa	Known RBP	7.73	□□□□□ -1.17
BBX-223	ENST00000473542	DLGAP3	O95886	979 aa		7.73	□□□□□ -1.17
BBX-223	ENST00000473542	MAPK8	P45983	427 aa		7.73	□□□□□ -1.17
BBX-223	ENST00000473542	C8orf34	Q49A92	452 aa		7.73	□□□□□ -1.17
BBX-223	ENST00000473542	NFXL1	Q6ZNB6	911 aa		7.73	□□□□□ -1.17
BBX-223	ENST00000473542	FRMD6	Q96NE9	622 aa		7.73	□□□□□ -1.17
BBX-223	ENST00000473542	CSRNP1	Q96S65	589 aa		7.73	□□□□□ -1.17
BBX-223	ENST00000473542	MEGF11	A6BM72	1044 aa		7.72	□□□□□ -1.17
BBX-223	ENST00000473542	C19orf57	Q0VDD7	668 aa		7.72	□□□□□ -1.17
BBX-223	ENST00000473542	MSMP	Q1L6U9	139 aa		7.72	□□□□□ -1.17
BBX-223	ENST00000473542	RXRB	P28702	533 aa		7.71	□□□□□ -1.18
BBX-223	ENST00000473542	TAGLN	Q01995	201 aa	Known RBP	7.71	□□□□□ -1.18
BBX-223	ENST00000473542	MRPL58	Q14197	206 aa	Known RBP	7.71	□□□□□ -1.18
BBX-223	ENST00000473542	TMC4	Q7Z404	712 aa		7.71	□□□□□ -1.18
BBX-223	ENST00000473542	VN1R5	Q7Z5H4	357 aa		7.71	□□□□□ -1.18
BBX-223	ENST00000473542	SNX29	Q8TEQ0	813 aa		7.71	□□□□□ -1.18
BBX-223	ENST00000473542	TMPRSS13	Q9BYE2	586 aa		7.71	□□□□□ -1.18
BBX-223	ENST00000473542	PNMA6F	A0A0J9YX94	578 aa		7.7	□□□□□ -1.18
BBX-223	ENST00000473542	EIF1AY	O14602	144 aa	Known RBP	7.7	□□□□□ -1.18
BBX-223	ENST00000473542	CPNE3	O75131	537 aa	Known RBP	7.7	□□□□□ -1.18
BBX-223	ENST00000473542	TNFRSF21	O75509	655 aa		7.7	□□□□□ -1.18
BBX-223	ENST00000473542	TIAF1	O95411	115 aa		7.7	□□□□□ -1.18
BBX-223	ENST00000473542	DRD2	P14416	443 aa		7.7	□□□□□ -1.18
BBX-223	ENST00000473542	LCE1D	Q5T752	114 aa		7.7	□□□□□ -1.18
BBX-223	ENST00000473542	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.7	□□□□□ -1.18
BBX-223	ENST00000473542	C12orf50	Q8NA57	414 aa	Predicted RBP	7.7	□□□□□ -1.18
BBX-223	ENST00000473542	NXPE3	Q969Y0	559 aa		7.7	□□□□□ -1.18
BBX-223	ENST00000473542	USP26	Q9BXU7	913 aa		7.7	□□□□□ -1.18
BBX-223	ENST00000473542	LOC100289279	A0A1B0GTE1	492 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	DAB2	P98082	770 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	XPC	Q01831	940 aa	Predicted RBP	7.69	□□□□□ -1.18
BBX-223	ENST00000473542	CDPF1	Q6NVV7	123 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	OSMR	Q99650	979 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	ZKSCAN3	Q9BRR0	538 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	ATG3	Q9NT62	314 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	CCDC39	Q9UFE4	941 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	PARP2	Q9UGN5	583 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	LEMD3	Q9Y2U8	911 aa		7.69	□□□□□ -1.18
BBX-223	ENST00000473542	EREG	O14944	169 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	FOSL1	P15407	271 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	ADM	P35318	185 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	ORC1	Q13415	861 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	FZD5	Q13467	585 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	IKBKE	Q14164	716 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	NFKBIB	Q15653	356 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	NUTM2G	Q5VZR2	741 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	FBLIM1	Q8WUP2	373 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	PMEPA1	Q969W9	287 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	DUSP9	Q99956	384 aa	Known RBP	7.68	□□□□□ -1.18
BBX-223	ENST00000473542	OSBPL1A	Q9BXW6	950 aa		7.68	□□□□□ -1.18
BBX-223	ENST00000473542	GIPC1	O14908	333 aa		7.67	□□□□□ -1.18
BBX-223	ENST00000473542	GNA15	P30679	374 aa		7.67	□□□□□ -1.18
BBX-223	ENST00000473542	ARL4D	P49703	201 aa		7.67	□□□□□ -1.18
BBX-223	ENST00000473542	SMG8	Q8ND04	991 aa	Known RBP	7.67	□□□□□ -1.18
BBX-223	ENST00000473542	BSND	Q8WZ55	320 aa		7.67	□□□□□ -1.18
BBX-223	ENST00000473542	KRTAP4-7	Q9BYR0	210 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms