RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 TXNRD3Q86VQ6 643 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 TSPYL6Q8N831 410 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 SLC10A4Q96EP9 437 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 MS4A4AQ96JQ5 239 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 DEFB129Q9H1M3 183 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 MYH16Q9H6N6 1097 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 PRKRIP1Q9H875 184 aaPredicted RBP8.83□□□□□ -1
CKS1B-205ENST00000473344 HTTP42858 3142 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 MANSC4A6NHS7 340 aaPredicted RBP8.82□□□□□ -1
CKS1B-205ENST00000473344 H7C1W4 665 aa8.82□□□□□ -1
CKS1B-205ENST00000473344 TWISTNBQ3B726 338 aaPredicted RBP8.82□□□□□ -1
CKS1B-205ENST00000473344 SPRYD7Q5W111 196 aa8.82□□□□□ -1
CKS1B-205ENST00000473344 GPR153Q6NV75 609 aa8.82□□□□□ -1
CKS1B-205ENST00000473344 TMEM92Q6UXU6 159 aa8.82□□□□□ -1
CKS1B-205ENST00000473344 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
CKS1B-205ENST00000473344 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
CKS1B-205ENST00000473344 POLR2AP24928 1970 aaKnown RBP8.81□□□□□ -1
CKS1B-205ENST00000473344 ANKRD18BA2A2Z9 1011 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 F8W031 263 aaPredicted RBP8.81□□□□□ -1
CKS1B-205ENST00000473344 ZBTB48P10074 688 aaPredicted RBP8.81□□□□□ -1
CKS1B-205ENST00000473344 KLRK1P26718 216 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 RBM5P52756 815 aaKnown RBP eCLIP8.81□□□□□ -1
CKS1B-205ENST00000473344 CHRNDQ07001 517 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
CKS1B-205ENST00000473344 GCKRQ14397 625 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 SUPT20HL1Q3ZLR7 823 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 LDLRAD1Q5T700 205 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 INTS3Q68E01 1043 aaKnown RBP8.81□□□□□ -1
CKS1B-205ENST00000473344 OTUD7BQ6GQQ9 843 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 GCC1Q96CN9 775 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 CD209Q9NNX6 404 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 FZD1Q9UP38 647 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 CHMP3Q9Y3E7 222 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 TRIM17Q9Y577 477 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 PPP2R3BQ9Y5P8 575 aa8.81□□□□□ -1
CKS1B-205ENST00000473344 COL1A1P02452 1464 aaPredicted RBP8.81□□□□□ -1
CKS1B-205ENST00000473344 PSME4Q14997 1843 aa8.8□□□□□ -1
CKS1B-205ENST00000473344 FLIIQ13045 1269 aa8.8□□□□□ -1
CKS1B-205ENST00000473344 IFIT5Q13325 482 aaKnown RBP8.8□□□□□ -1
CKS1B-205ENST00000473344 ZNF804AQ7Z570 1209 aa8.8□□□□□ -1
CKS1B-205ENST00000473344 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
CKS1B-205ENST00000473344 PLA2G12BQ9BX93 195 aa8.8□□□□□ -1
CKS1B-205ENST00000473344 VEZTQ9HBM0 779 aa8.8□□□□□ -1
CKS1B-205ENST00000473344 CLRN2A0PK11 232 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 UNCXA6NJT0 531 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 TAF5LO75529 589 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 CSF1RP07333 972 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 IREB2P48200 963 aaKnown RBP8.79□□□□□ -1
CKS1B-205ENST00000473344 MAP3K11Q16584 847 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 CFAP100Q494V2 611 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 TAF7LQ5H9L4 462 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 G2E3Q7L622 706 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 LINS1Q8NG48 757 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 ERO1AQ96HE7 468 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 WNK4Q96J92 1243 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 R3HDMLQ9H3Y0 253 aa8.79□□□□□ -1
CKS1B-205ENST00000473344 PLIN1O60240 522 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 TNFAIP1Q13829 316 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 CCDC27Q2M243 656 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 CCDC57Q2TAC2 916 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 OTOP1Q7RTM1 612 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 ANKRD13AQ8IZ07 590 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 CERS5Q8N5B7 392 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
CKS1B-205ENST00000473344 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
CKS1B-205ENST00000473344 CLMNQ96JQ2 1002 aa8.78□□□□□ -1
CKS1B-205ENST00000473344 SPEF2Q9C093 1822 aa8.77□□□□□ -1
CKS1B-205ENST00000473344 ZNF316A6NFI3 1004 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-205ENST00000473344 SNAP23O00161 211 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 IGF2BP3O00425 579 aaKnown RBP eCLIP8.77□□□□□ -1.01
CKS1B-205ENST00000473344 IL1R1P14778 569 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 CASP7P55210 303 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 FKBP1AP62942 108 aaKnown RBP8.77□□□□□ -1.01
CKS1B-205ENST00000473344 RASA3Q14644 834 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 ARHGEF6Q15052 776 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 NBPF12Q5TAG4 269 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-205ENST00000473344 LDHAL6AQ6ZMR3 332 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 C15orf52Q6ZUT6 534 aaKnown RBP8.77□□□□□ -1.01
CKS1B-205ENST00000473344 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 PRMT6Q96LA8 375 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-205ENST00000473344 EFCC1Q9HA90 598 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 CNNM1Q9NRU3 951 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 JAG2Q9Y219 1238 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 PTPN22Q9Y2R2 807 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 PCDHAC2Q9Y5I4 1007 aa8.77□□□□□ -1.01
CKS1B-205ENST00000473344 WDHD1O75717 1129 aaPredicted RBP8.76□□□□□ -1.01
CKS1B-205ENST00000473344 TNNI2P48788 182 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 SP3Q02447 781 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 CRHR2Q13324 411 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 LMBR1LQ6UX01 489 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 CD99L2Q8TCZ2 262 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 OPTNQ96CV9 577 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 ELP3Q9H9T3 547 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 IL16Q14005 1332 aa8.76□□□□□ -1.01
CKS1B-205ENST00000473344 SSC5DA1L4H1 1573 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 USP2O75604 605 aaPredicted RBP8.75□□□□□ -1.01
CKS1B-205ENST00000473344 FOXO4P98177 505 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms