RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 NEFLP07196 543 aa25.38■■□□□ 1.65
TOP3A-204ENST00000472959 PRDX5P30044 214 aa25.38■■□□□ 1.65
TOP3A-204ENST00000472959 CRKP46108 304 aa25.38■■□□□ 1.65
TOP3A-204ENST00000472959 RBM5P52756 815 aaKnown RBP eCLIP25.38■■□□□ 1.65
TOP3A-204ENST00000472959 MAP1SQ66K74 1059 aaPredicted RBP25.38■■□□□ 1.65
TOP3A-204ENST00000472959 CNTROBQ8N137 903 aa25.38■■□□□ 1.65
TOP3A-204ENST00000472959 SNRKQ9NRH2 765 aa25.38■■□□□ 1.65
TOP3A-204ENST00000472959 ADAMTSL1Q8N6G6 1762 aa25.38■■□□□ 1.65
TOP3A-204ENST00000472959 SPDYE2BA6NHP3 402 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 IGSF3O75054 1194 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 SPDYE6P0CI01 402 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 ATP5JP18859 108 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 NBPF9Q3BBW0 867 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 HHIPL2Q6UWX4 724 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 ERICH6Q7L0X2 663 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 DCPSQ96C86 337 aaKnown RBP25.37■■□□□ 1.65
TOP3A-204ENST00000472959 GPATCH3Q96I76 525 aa25.37■■□□□ 1.65
TOP3A-204ENST00000472959 ZAP70P43403 619 aa25.36■■□□□ 1.65
TOP3A-204ENST00000472959 ECHDC1Q9NTX5 307 aa25.36■■□□□ 1.65
TOP3A-204ENST00000472959 PITPNM2Q9BZ72 1349 aa25.36■■□□□ 1.65
TOP3A-204ENST00000472959 MYO1BO43795 1136 aa25.35■■□□□ 1.65
TOP3A-204ENST00000472959 ITGBL1O95965 494 aaPredicted RBP25.35■■□□□ 1.65
TOP3A-204ENST00000472959 CYP2E1P05181 493 aaPredicted RBP25.35■■□□□ 1.65
TOP3A-204ENST00000472959 TBC1D9Q6ZT07 1266 aa25.35■■□□□ 1.65
TOP3A-204ENST00000472959 CDC37L1Q7L3B6 337 aa25.35■■□□□ 1.65
TOP3A-204ENST00000472959 DZIP1Q86YF9 867 aaKnown RBP25.35■■□□□ 1.65
TOP3A-204ENST00000472959 SLF2Q8IX21 1173 aa25.35■■□□□ 1.65
TOP3A-204ENST00000472959 ZDHHC15Q96MV8 337 aa25.35■■□□□ 1.65
TOP3A-204ENST00000472959 GGA3Q9NZ52 723 aa25.35■■□□□ 1.65
TOP3A-204ENST00000472959 LRP2BPQ9P2M1 347 aa25.35■■□□□ 1.65
TOP3A-204ENST00000472959 ANGEL2Q5VTE6 544 aaKnown RBP25.34■■□□□ 1.65
TOP3A-204ENST00000472959 PRMT6Q96LA8 375 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-204ENST00000472959 SULF1Q8IWU6 871 aa25.33■■□□□ 1.65
TOP3A-204ENST00000472959 MYH13Q9UKX3 1938 aa25.33■■□□□ 1.65
TOP3A-204ENST00000472959 ASTN2O75129 1339 aaPredicted RBP25.33■■□□□ 1.64
TOP3A-204ENST00000472959 GSTO1P78417 241 aa25.32■■□□□ 1.64
TOP3A-204ENST00000472959 NUCB1Q02818 461 aa25.32■■□□□ 1.64
TOP3A-204ENST00000472959 MECOMQ03112 1051 aa25.32■■□□□ 1.64
TOP3A-204ENST00000472959 TTF1Q15361 905 aaPredicted RBP25.32■■□□□ 1.64
TOP3A-204ENST00000472959 KRT26Q7Z3Y9 468 aa25.32■■□□□ 1.64
TOP3A-204ENST00000472959 RAI14Q9P0K7 980 aa25.32■■□□□ 1.64
TOP3A-204ENST00000472959 PCDHAC2Q9Y5I4 1007 aa25.32■■□□□ 1.64
TOP3A-204ENST00000472959 DIXDC1Q155Q3 683 aa25.31■■□□□ 1.64
TOP3A-204ENST00000472959 B4GALNT3Q6L9W6 998 aa25.31■■□□□ 1.64
TOP3A-204ENST00000472959 APOBEC3FQ8IUX4 373 aaKnown RBP25.31■■□□□ 1.64
TOP3A-204ENST00000472959 FAM163AQ96GL9 167 aaPredicted RBP25.31■■□□□ 1.64
TOP3A-204ENST00000472959 HAUS7Q99871 368 aa25.31■■□□□ 1.64
TOP3A-204ENST00000472959 TTC41PQ6P2S7 1318 aa25.31■■□□□ 1.64
TOP3A-204ENST00000472959 LDHCP07864 332 aa25.3■■□□□ 1.64
TOP3A-204ENST00000472959 APOBEC3HQ6NTF7 200 aaKnown RBP25.3■■□□□ 1.64
TOP3A-204ENST00000472959 USP48Q86UV5 1035 aa25.3■■□□□ 1.64
TOP3A-204ENST00000472959 CHD1LQ86WJ1 897 aa25.3■■□□□ 1.64
TOP3A-204ENST00000472959 NSUN4Q96CB9 384 aaKnown RBP25.3■■□□□ 1.64
TOP3A-204ENST00000472959 GLIS2Q9BZE0 524 aaPredicted RBP25.3■■□□□ 1.64
TOP3A-204ENST00000472959 BOLA2Q9H3K6 86 aa25.3■■□□□ 1.64
TOP3A-204ENST00000472959 PIH1D3Q9NQM4 214 aaKnown RBP25.3■■□□□ 1.64
TOP3A-204ENST00000472959 DAGLAQ9Y4D2 1042 aa25.3■■□□□ 1.64
TOP3A-204ENST00000472959 PASKQ96RG2 1323 aa25.3■■□□□ 1.64
TOP3A-204ENST00000472959 SPDYE2Q495Y8 402 aa25.29■■□□□ 1.64
TOP3A-204ENST00000472959 TMED8Q6PL24 325 aaPredicted RBP25.29■■□□□ 1.64
TOP3A-204ENST00000472959 DNAJC2Q99543 621 aaKnown RBP25.29■■□□□ 1.64
TOP3A-204ENST00000472959 GAKO14976 1311 aa25.29■■□□□ 1.64
TOP3A-204ENST00000472959 ERC2O15083 957 aa25.28■■□□□ 1.64
TOP3A-204ENST00000472959 MX1P20591 662 aa25.28■■□□□ 1.64
TOP3A-204ENST00000472959 OTUD7AQ8TE49 926 aaPredicted RBP25.28■■□□□ 1.64
TOP3A-204ENST00000472959 LNPKQ9C0E8 428 aa25.28■■□□□ 1.64
TOP3A-204ENST00000472959 TDRD3Q9H7E2 651 aaKnown RBP25.28■■□□□ 1.64
TOP3A-204ENST00000472959 ZNF70Q9UC06 446 aaPredicted RBP25.28■■□□□ 1.64
TOP3A-204ENST00000472959 NDUFB9Q9Y6M9 179 aa25.28■■□□□ 1.64
TOP3A-204ENST00000472959 AKAP11Q9UKA4 1901 aa25.27■■□□□ 1.64
TOP3A-204ENST00000472959 GOLIM4O00461 696 aa25.27■■□□□ 1.64
TOP3A-204ENST00000472959 MAP3K12Q12852 859 aa25.27■■□□□ 1.64
TOP3A-204ENST00000472959 ANTXR1Q9H6X2 564 aa25.27■■□□□ 1.64
TOP3A-204ENST00000472959 PAG1Q9NWQ8 432 aa25.27■■□□□ 1.64
TOP3A-204ENST00000472959 SALL3Q9BXA9 1300 aa25.27■■□□□ 1.64
TOP3A-204ENST00000472959 CLRN2A0PK11 232 aa25.26■■□□□ 1.63
TOP3A-204ENST00000472959 TRAF5O00463 557 aa25.26■■□□□ 1.63
TOP3A-204ENST00000472959 IDH1O75874 414 aaKnown RBP25.26■■□□□ 1.63
TOP3A-204ENST00000472959 GLRX3O76003 335 aaKnown RBP25.26■■□□□ 1.63
TOP3A-204ENST00000472959 NAA16Q6N069 864 aaPredicted RBP25.26■■□□□ 1.63
TOP3A-204ENST00000472959 ZNF384Q8TF68 577 aa25.26■■□□□ 1.63
TOP3A-204ENST00000472959 STAP2Q9UGK3 403 aa25.26■■□□□ 1.63
TOP3A-204ENST00000472959 MROH7-TTC4A0A0A0MT08 1334 aa25.26■■□□□ 1.63
TOP3A-204ENST00000472959 ADM5C9JUS6 153 aa25.25■■□□□ 1.63
TOP3A-204ENST00000472959 APLP1P51693 650 aa25.25■■□□□ 1.63
TOP3A-204ENST00000472959 TNFAIP1Q13829 316 aa25.25■■□□□ 1.63
TOP3A-204ENST00000472959 VEZTQ9HBM0 779 aa25.25■■□□□ 1.63
TOP3A-204ENST00000472959 TMOD2Q9NZR1 351 aa25.25■■□□□ 1.63
TOP3A-204ENST00000472959 AOX1Q06278 1338 aa25.25■■□□□ 1.63
TOP3A-204ENST00000472959 GPR75-ASB3A0A0A6YYF3 556 aa25.24■■□□□ 1.63
TOP3A-204ENST00000472959 HSPA6P17066 643 aa25.24■■□□□ 1.63
TOP3A-204ENST00000472959 FKBP1CQ5VVH2 108 aa25.24■■□□□ 1.63
TOP3A-204ENST00000472959 ERICH6BQ5W0A0 696 aa25.24■■□□□ 1.63
TOP3A-204ENST00000472959 TSHZ3Q63HK5 1081 aa25.24■■□□□ 1.63
TOP3A-204ENST00000472959 PPP2R3BQ9Y5P8 575 aa25.24■■□□□ 1.63
TOP3A-204ENST00000472959 PDE1AP54750 535 aa25.23■■□□□ 1.63
TOP3A-204ENST00000472959 CDC42EP5Q6NZY7 148 aa25.23■■□□□ 1.63
TOP3A-204ENST00000472959 PI4K2BQ8TCG2 481 aa25.23■■□□□ 1.63
TOP3A-204ENST00000472959 DEFB129Q9H1M3 183 aa25.23■■□□□ 1.63
TOP3A-204ENST00000472959 MAP4K4O95819 1239 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms