RNA–Protein interactions for RNA: ENST00000472958.5

EXD3-204, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 4

Gene EXD3, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-204ENST00000472958 NBPF12Q5TAG4 269 aaPredicted RBP23.96■■□□□ 1.43
EXD3-204ENST00000472958 SPRYD7Q5W111 196 aa23.96■■□□□ 1.43
EXD3-204ENST00000472958 ATG9AQ7Z3C6 839 aa23.96■■□□□ 1.43
EXD3-204ENST00000472958 LPIN2Q92539 896 aa23.96■■□□□ 1.43
EXD3-204ENST00000472958 ARHGAP45Q92619 1136 aa23.96■■□□□ 1.43
EXD3-204ENST00000472958 FZD1Q9UP38 647 aa23.96■■□□□ 1.43
EXD3-204ENST00000472958 MKRN3Q13064 507 aaKnown RBP23.95■■□□□ 1.42
EXD3-204ENST00000472958 TDRD3Q9H7E2 651 aaKnown RBP23.95■■□□□ 1.42
EXD3-204ENST00000472958 SUGT1Q9Y2Z0 365 aa23.95■■□□□ 1.42
EXD3-204ENST00000472958 MAST3O60307 1309 aa23.94■■□□□ 1.42
EXD3-204ENST00000472958 CCDC85CA6NKD9 419 aa23.94■■□□□ 1.42
EXD3-204ENST00000472958 LRRFIP2Q9Y608 721 aaKnown RBP23.94■■□□□ 1.42
EXD3-204ENST00000472958 ZBTB48P10074 688 aaPredicted RBP23.93■■□□□ 1.42
EXD3-204ENST00000472958 IREB2P48200 963 aaKnown RBP23.93■■□□□ 1.42
EXD3-204ENST00000472958 INTS3Q68E01 1043 aaKnown RBP23.93■■□□□ 1.42
EXD3-204ENST00000472958 TEKT1Q969V4 418 aa23.93■■□□□ 1.42
EXD3-204ENST00000472958 SLC10A4Q96EP9 437 aa23.93■■□□□ 1.42
EXD3-204ENST00000472958 MEIS3Q99687 375 aa23.93■■□□□ 1.42
EXD3-204ENST00000472958 TNNI2P48788 182 aa23.92■■□□□ 1.42
EXD3-204ENST00000472958 NOM1Q5C9Z4 860 aaKnown RBP23.92■■□□□ 1.42
EXD3-204ENST00000472958 WNK4Q96J92 1243 aa23.92■■□□□ 1.42
EXD3-204ENST00000472958 CLMNQ96JQ2 1002 aa23.92■■□□□ 1.42
EXD3-204ENST00000472958 MRIQ9BWK5 157 aa23.92■■□□□ 1.42
EXD3-204ENST00000472958 CFHR5Q9BXR6 569 aa23.92■■□□□ 1.42
EXD3-204ENST00000472958 SIL1Q9H173 461 aa23.92■■□□□ 1.42
EXD3-204ENST00000472958 MANSC4A6NHS7 340 aaPredicted RBP23.91■■□□□ 1.42
EXD3-204ENST00000472958 ATP2B3Q16720 1220 aa23.91■■□□□ 1.42
EXD3-204ENST00000472958 CTU1Q7Z7A3 348 aaKnown RBP23.91■■□□□ 1.42
EXD3-204ENST00000472958 TEPSINQ96N21 525 aa23.91■■□□□ 1.42
EXD3-204ENST00000472958 USP2O75604 605 aaPredicted RBP23.9■■□□□ 1.42
EXD3-204ENST00000472958 TBC1D8O95759 1140 aa23.9■■□□□ 1.42
EXD3-204ENST00000472958 IL15P40933 162 aaPredicted RBP23.9■■□□□ 1.42
EXD3-204ENST00000472958 ANKRD13AQ8IZ07 590 aa23.9■■□□□ 1.42
EXD3-204ENST00000472958 WDR66Q8TBY9 1149 aa23.9■■□□□ 1.42
EXD3-204ENST00000472958 ZDHHC15Q96MV8 337 aa23.9■■□□□ 1.42
EXD3-204ENST00000472958 COPRSQ9NQ92 184 aa23.9■■□□□ 1.42
EXD3-204ENST00000472958 CEP126Q9P2H0 1117 aa23.9■■□□□ 1.42
EXD3-204ENST00000472958 TCP10L2B9ZVM9 353 aa23.89■■□□□ 1.41
EXD3-204ENST00000472958 GNAI3P08754 354 aa23.89■■□□□ 1.41
EXD3-204ENST00000472958 INHBEP58166 350 aa23.89■■□□□ 1.41
EXD3-204ENST00000472958 IPO8O15397 1037 aaKnown RBP23.88■■□□□ 1.41
EXD3-204ENST00000472958 ALDH1A1P00352 501 aa23.88■■□□□ 1.41
EXD3-204ENST00000472958 CDAN1Q8IWY9 1227 aa23.88■■□□□ 1.41
EXD3-204ENST00000472958 ZNF296Q8WUU4 475 aaPredicted RBP23.88■■□□□ 1.41
EXD3-204ENST00000472958 TMEM39BQ9GZU3 492 aa23.88■■□□□ 1.41
EXD3-204ENST00000472958 FKBP1CQ5VVH2 108 aa23.87■■□□□ 1.41
EXD3-204ENST00000472958 HHIPL2Q6UWX4 724 aa23.87■■□□□ 1.41
EXD3-204ENST00000472958 TMOD2Q9NZR1 351 aa23.87■■□□□ 1.41
EXD3-204ENST00000472958 PA2G4Q9UQ80 394 aaKnown RBP23.87■■□□□ 1.41
EXD3-204ENST00000472958 GPR25O00155 361 aa23.86■■□□□ 1.41
EXD3-204ENST00000472958 ZBTB22O15209 634 aa23.86■■□□□ 1.41
EXD3-204ENST00000472958 TRIM27P14373 513 aa23.86■■□□□ 1.41
EXD3-204ENST00000472958 RGS19P49795 217 aa23.86■■□□□ 1.41
EXD3-204ENST00000472958 MTX1Q13505 466 aa23.86■■□□□ 1.41
EXD3-204ENST00000472958 APOBEC3HQ6NTF7 200 aaKnown RBP23.86■■□□□ 1.41
EXD3-204ENST00000472958 GNL3LQ9NVN8 582 aaKnown RBP23.86■■□□□ 1.41
EXD3-204ENST00000472958 SEMA3EO15041 775 aa23.85■■□□□ 1.41
EXD3-204ENST00000472958 ATF7IPQ6VMQ6 1270 aa23.85■■□□□ 1.41
EXD3-204ENST00000472958 FAM83AQ86UY5 434 aa23.85■■□□□ 1.41
EXD3-204ENST00000472958 IFNL1Q8IU54 200 aa23.85■■□□□ 1.41
EXD3-204ENST00000472958 RPAP1Q9BWH6 1393 aaPredicted RBP23.85■■□□□ 1.41
EXD3-204ENST00000472958 GJA5P36382 358 aa23.84■■□□□ 1.41
EXD3-204ENST00000472958 CACNB3P54284 484 aa23.84■■□□□ 1.41
EXD3-204ENST00000472958 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.84■■□□□ 1.41
EXD3-204ENST00000472958 SALL1Q9NSC2 1324 aa23.84■■□□□ 1.41
EXD3-204ENST00000472958 SRGAP3O43295 1099 aa23.83■■□□□ 1.41
EXD3-204ENST00000472958 PKN2Q16513 984 aaKnown RBP23.83■■□□□ 1.41
EXD3-204ENST00000472958 ELP3Q9H9T3 547 aa23.83■■□□□ 1.41
EXD3-204ENST00000472958 DENND2AQ9ULE3 1009 aa23.83■■□□□ 1.41
EXD3-204ENST00000472958 IGF2BP3O00425 579 aaKnown RBP eCLIP23.82■■□□□ 1.4
EXD3-204ENST00000472958 BCAR3O75815 825 aa23.82■■□□□ 1.4
EXD3-204ENST00000472958 PHKA1P46020 1223 aa23.82■■□□□ 1.4
EXD3-204ENST00000472958 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.82■■□□□ 1.4
EXD3-204ENST00000472958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.82■■□□□ 1.4
EXD3-204ENST00000472958 HOOK2Q96ED9 719 aa23.82■■□□□ 1.4
EXD3-204ENST00000472958 FKTNO75072 461 aa23.81■■□□□ 1.4
EXD3-204ENST00000472958 FRAT1Q92837 279 aaPredicted RBP23.81■■□□□ 1.4
EXD3-204ENST00000472958 OPTNQ96CV9 577 aa23.81■■□□□ 1.4
EXD3-204ENST00000472958 R3HDMLQ9H3Y0 253 aa23.81■■□□□ 1.4
EXD3-204ENST00000472958 TNNQ9UQP3 1299 aa23.81■■□□□ 1.4
EXD3-204ENST00000472958 TESPA1A2RU30 521 aaPredicted RBP23.8■■□□□ 1.4
EXD3-204ENST00000472958 LDHBP07195 334 aaKnown RBP23.8■■□□□ 1.4
EXD3-204ENST00000472958 PRDX5P30044 214 aa23.8■■□□□ 1.4
EXD3-204ENST00000472958 MAP3K9P80192 1104 aa23.8■■□□□ 1.4
EXD3-204ENST00000472958 VGLL4Q14135 290 aa23.8■■□□□ 1.4
EXD3-204ENST00000472958 DAGLAQ9Y4D2 1042 aa23.8■■□□□ 1.4
EXD3-204ENST00000472958 CSADQ9Y600 493 aa23.8■■□□□ 1.4
EXD3-204ENST00000472958 PDS5AQ29RF7 1337 aaKnown RBP23.8■■□□□ 1.4
EXD3-204ENST00000472958 GNAI2P04899 355 aa23.79■■□□□ 1.4
EXD3-204ENST00000472958 ADORA1P30542 326 aa23.79■■□□□ 1.4
EXD3-204ENST00000472958 HNRNPUQ00839 825 aaKnown RBP eCLIP23.79■■□□□ 1.4
EXD3-204ENST00000472958 MLLT1Q03111 559 aaPredicted RBP23.79■■□□□ 1.4
EXD3-204ENST00000472958 DIXDC1Q155Q3 683 aa23.79■■□□□ 1.4
EXD3-204ENST00000472958 CCDC102BQ68D86 513 aa23.79■■□□□ 1.4
EXD3-204ENST00000472958 OTUD7BQ6GQQ9 843 aa23.79■■□□□ 1.4
EXD3-204ENST00000472958 MIER1Q8N108 512 aa23.79■■□□□ 1.4
EXD3-204ENST00000472958 ZGPATQ8N5A5 531 aaKnown RBP23.78■■□□□ 1.4
EXD3-204ENST00000472958 AKAP2Q9Y2D5 859 aa23.78■■□□□ 1.4
EXD3-204ENST00000472958 ZKSCAN2Q63HK3 967 aa23.77■■□□□ 1.4
EXD3-204ENST00000472958 DCAF15Q66K64 600 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms