RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 A0A0D9SFI3 127 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 ERVV-1B6SEH8 477 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 STX6O43752 255 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 TAF5LO75529 589 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 LETM1O95202 739 aaPredicted RBP9.07□□□□□ -0.96
CCDC171-205ENST00000472806 IFIT1P09914 478 aaKnown RBP9.07□□□□□ -0.96
CCDC171-205ENST00000472806 RPS6KB1P23443 525 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 IFIT5Q13325 482 aaKnown RBP9.07□□□□□ -0.96
CCDC171-205ENST00000472806 PKP1Q13835 747 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 HIC1Q14526 733 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 PKDCCQ504Y2 493 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 GORABQ5T7V8 394 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 CAVIN1Q6NZI2 390 aaKnown RBP9.07□□□□□ -0.96
CCDC171-205ENST00000472806 ATG9AQ7Z3C6 839 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 DNAJC10Q8IXB1 793 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 TMEM87AQ8NBN3 555 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 AK7Q96M32 723 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 DNAJC2Q99543 621 aaKnown RBP9.07□□□□□ -0.96
CCDC171-205ENST00000472806 DSCC1Q9BVC3 393 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 PAG1Q9NWQ8 432 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 CSF1RP07333 972 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 IL6STP40189 918 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-205ENST00000472806 PRR20EP86478 221 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 PRR20CP86479 221 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 PRR20DP86480 221 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 PRR20BP86481 221 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 PRR20AP86496 221 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 CCDC173Q0VFZ6 552 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 TTC39AQ5SRH9 613 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 ZSCAN25Q6NSZ9 544 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-205ENST00000472806 TRIM44Q96DX7 344 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-205ENST00000472806 SPSB2Q99619 263 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 PKD2L1Q9P0L9 805 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 CTNNA3Q9UI47 895 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 KIF3AQ9Y496 699 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 ROBO1Q9Y6N7 1651 aa9.06□□□□□ -0.96
CCDC171-205ENST00000472806 WNK3Q9BYP7 1800 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 A0A1B0GUL7 405 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 ANKRD18BA2A2Z9 1011 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 RNF113AO15541 343 aaKnown RBP9.05□□□□□ -0.96
CCDC171-205ENST00000472806 F13A1P00488 732 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 GJB2P29033 226 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 NASPP49321 788 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-205ENST00000472806 FUT2Q10981 343 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 ZSCAN23Q3MJ62 389 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 CCDC83Q8IWF9 413 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 ASAP1Q9ULH1 1129 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-205ENST00000472806 ITGB4P16144 1822 aa9.05□□□□□ -0.96
CCDC171-205ENST00000472806 GOLIM4O00461 696 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 GNPATO15228 680 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 CYP19A1P11511 503 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-205ENST00000472806 SYT1P21579 422 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 UBE2HP62256 183 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 FOXC1Q12948 553 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 TTF1Q15361 905 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-205ENST00000472806 ADCK5Q3MIX3 580 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 ZMYM1Q5SVZ6 1142 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 MORN1Q5T089 497 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 LRSAM1Q6UWE0 723 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 DDX46Q7L014 1031 aaKnown RBP9.04□□□□□ -0.96
CCDC171-205ENST00000472806 NLRP10Q86W26 655 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 FAM160A2Q8N612 972 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-205ENST00000472806 RDH13Q8NBN7 331 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 THAP11Q96EK4 314 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 ARXQ96QS3 562 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCDC171-205ENST00000472806 PRDM9Q9NQV7 894 aa9.04□□□□□ -0.96
CCDC171-205ENST00000472806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-205ENST00000472806 COL16A1Q07092 1604 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-205ENST00000472806 PDE8AO60658 829 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 DGAT1O75907 488 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 UQCRFS1P1P0C7P4 283 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 CTSWP56202 376 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 FGD1P98174 961 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 LRRC24Q50LG9 513 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-205ENST00000472806 ZNF589Q86UQ0 364 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-205ENST00000472806 GPT2Q8TD30 523 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-205ENST00000472806 SMARCC1Q92922 1105 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-205ENST00000472806 ZNF512BQ96KM6 892 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-205ENST00000472806 LLPHQ9BRT6 129 aaKnown RBP9.03□□□□□ -0.96
CCDC171-205ENST00000472806 ANKRD36CQ5JPF3 1778 aa9.03□□□□□ -0.96
CCDC171-205ENST00000472806 TIMM10P62072 90 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 KRT85P78386 507 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 DDB1Q16531 1140 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 ATP2B3Q16720 1220 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 ME3Q16798 604 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 PARP10Q53GL7 1025 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 METTL24Q5JXM2 366 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 CCDC183Q5T5S1 534 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 LARP1BQ659C4 914 aaKnown RBP9.02□□□□□ -0.97
CCDC171-205ENST00000472806 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
CCDC171-205ENST00000472806 DZIP3Q86Y13 1208 aaKnown RBP9.02□□□□□ -0.97
CCDC171-205ENST00000472806 FAM184AQ8NB25 1140 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms