RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 RECKO95980 971 aa9.62□□□□□ -0.87
CLK1-209ENST00000472679 CELA3AP09093 270 aa9.62□□□□□ -0.87
CLK1-209ENST00000472679 RASSF7Q02833 373 aa9.62□□□□□ -0.87
CLK1-209ENST00000472679 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
CLK1-209ENST00000472679 STK35Q8TDR2 534 aa9.62□□□□□ -0.87
CLK1-209ENST00000472679 UBASH3BQ8TF42 649 aa9.62□□□□□ -0.87
CLK1-209ENST00000472679 ECEL1O95672 775 aa9.61□□□□□ -0.87
CLK1-209ENST00000472679 VAMP1P23763 118 aa9.61□□□□□ -0.87
CLK1-209ENST00000472679 TSNAXIP1Q2TAA8 658 aa9.61□□□□□ -0.87
CLK1-209ENST00000472679 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
CLK1-209ENST00000472679 DLGAP3O95886 979 aa9.6□□□□□ -0.87
CLK1-209ENST00000472679 CTSBP07858 339 aa9.6□□□□□ -0.87
CLK1-209ENST00000472679 CCDC85BQ15834 202 aaPredicted RBP9.6□□□□□ -0.87
CLK1-209ENST00000472679 USP26Q9BXU7 913 aa9.6□□□□□ -0.87
CLK1-209ENST00000472679 CEP44Q9C0F1 390 aa9.6□□□□□ -0.87
CLK1-209ENST00000472679 BCL11AQ9H165 835 aa9.6□□□□□ -0.87
CLK1-209ENST00000472679 MAOBP27338 520 aa9.59□□□□□ -0.87
CLK1-209ENST00000472679 ITGAEP38570 1179 aa9.59□□□□□ -0.87
CLK1-209ENST00000472679 ST13P50502 369 aaKnown RBP9.59□□□□□ -0.87
CLK1-209ENST00000472679 PPP2R3AQ06190 1150 aa9.59□□□□□ -0.87
CLK1-209ENST00000472679 SV2BQ7L1I2 683 aa9.59□□□□□ -0.87
CLK1-209ENST00000472679 ALYREFQ86V81 257 aaKnown RBP9.59□□□□□ -0.87
CLK1-209ENST00000472679 TMEM87AQ8NBN3 555 aa9.59□□□□□ -0.87
CLK1-209ENST00000472679 LENG1Q96BZ8 264 aaPredicted RBP9.59□□□□□ -0.87
CLK1-209ENST00000472679 LOC100289279A0A1B0GTE1 492 aa9.58□□□□□ -0.88
CLK1-209ENST00000472679 APBA3O96018 575 aa9.58□□□□□ -0.88
CLK1-209ENST00000472679 DUOXA2Q1HG44 320 aa9.58□□□□□ -0.88
CLK1-209ENST00000472679 RASIP1Q5U651 963 aa9.58□□□□□ -0.88
CLK1-209ENST00000472679 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
CLK1-209ENST00000472679 ALX3O95076 343 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 BMP6P22004 513 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 CHRNA4P43681 627 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 POU4F3Q15319 338 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 MAP3K11Q16584 847 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 SULF2Q8IWU5 870 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 DDX54Q8TDD1 881 aaKnown RBP9.57□□□□□ -0.88
CLK1-209ENST00000472679 DCAF11Q8TEB1 546 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 ZC3H12CQ9C0D7 883 aaKnown RBP9.57□□□□□ -0.88
CLK1-209ENST00000472679 MRPL18Q9H0U6 180 aaKnown RBP9.57□□□□□ -0.88
CLK1-209ENST00000472679 USP21Q9UK80 565 aa9.57□□□□□ -0.88
CLK1-209ENST00000472679 CYP11A1P05108 521 aa9.56□□□□□ -0.88
CLK1-209ENST00000472679 NME2P22392 152 aa9.56□□□□□ -0.88
CLK1-209ENST00000472679 AP3B2Q13367 1082 aa9.56□□□□□ -0.88
CLK1-209ENST00000472679 ACAD11Q709F0 780 aa9.56□□□□□ -0.88
CLK1-209ENST00000472679 PDZD3Q86UT5 571 aa9.56□□□□□ -0.88
CLK1-209ENST00000472679 CD163Q86VB7 1156 aa9.56□□□□□ -0.88
CLK1-209ENST00000472679 AGGF1Q8N302 714 aaeCLIP9.56□□□□□ -0.88
CLK1-209ENST00000472679 C1QTNF9BB2RNN3 333 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 F6X3S4 739 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 F8W735 103 aaPredicted RBP9.55□□□□□ -0.88
CLK1-209ENST00000472679 GDF11O95390 407 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 ITGB2P05107 769 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 ARNTP27540 789 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 PCNX4Q63HM2 1172 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.55□□□□□ -0.88
CLK1-209ENST00000472679 GRIN3AQ8TCU5 1115 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 NACC1Q96RE7 527 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 CORO1BQ9BR76 489 aa9.55□□□□□ -0.88
CLK1-209ENST00000472679 NOC4LQ9BVI4 516 aaKnown RBP9.55□□□□□ -0.88
CLK1-209ENST00000472679 C9orf172C9J069 976 aa9.54□□□□□ -0.88
CLK1-209ENST00000472679 GSTP1P09211 210 aaKnown RBP9.54□□□□□ -0.88
CLK1-209ENST00000472679 MBTPS1Q14703 1052 aa9.54□□□□□ -0.88
CLK1-209ENST00000472679 TMEM130Q8N3G9 435 aa9.54□□□□□ -0.88
CLK1-209ENST00000472679 FANCCQ00597 558 aa9.53□□□□□ -0.88
CLK1-209ENST00000472679 ZNF252P-AS1Q0IIN9 211 aa9.53□□□□□ -0.88
CLK1-209ENST00000472679 ADGRE1Q14246 886 aa9.53□□□□□ -0.88
CLK1-209ENST00000472679 TTBK2Q6IQ55 1244 aa9.53□□□□□ -0.88
CLK1-209ENST00000472679 TMEM151AQ8N4L1 468 aa9.53□□□□□ -0.88
CLK1-209ENST00000472679 CCDC86Q9H6F5 360 aaKnown RBP9.53□□□□□ -0.88
CLK1-209ENST00000472679 CBX8Q9HC52 389 aa9.53□□□□□ -0.88
CLK1-209ENST00000472679 EIF4EBP3O60516 100 aaPredicted RBP9.52□□□□□ -0.89
CLK1-209ENST00000472679 NOS3P29474 1203 aa9.52□□□□□ -0.89
CLK1-209ENST00000472679 IREB2P48200 963 aaKnown RBP9.52□□□□□ -0.89
CLK1-209ENST00000472679 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
CLK1-209ENST00000472679 WDR89Q96FK6 387 aaPredicted RBP9.52□□□□□ -0.89
CLK1-209ENST00000472679 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
CLK1-209ENST00000472679 AKTIPQ9H8T0 292 aa9.52□□□□□ -0.89
CLK1-209ENST00000472679 COPRSQ9NQ92 184 aa9.52□□□□□ -0.89
CLK1-209ENST00000472679 LIG3P49916 1009 aa9.51□□□□□ -0.89
CLK1-209ENST00000472679 NRG1Q02297 640 aaPredicted RBP9.51□□□□□ -0.89
CLK1-209ENST00000472679 MAP1SQ66K74 1059 aaPredicted RBP9.51□□□□□ -0.89
CLK1-209ENST00000472679 KCNB2Q92953 911 aa9.51□□□□□ -0.89
CLK1-209ENST00000472679 TMPRSS13Q9BYE2 586 aa9.51□□□□□ -0.89
CLK1-209ENST00000472679 TLR6Q9Y2C9 796 aa9.51□□□□□ -0.89
CLK1-209ENST00000472679 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
CLK1-209ENST00000472679 E9PSI1 815 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 SCAMP3O14828 347 aaKnown RBP9.5□□□□□ -0.89
CLK1-209ENST00000472679 ZNF862O60290 1169 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 LIG1P18858 919 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 ZNF76P36508 570 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 PDE3AQ14432 1141 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 PLA2G4EQ3MJ16 856 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 ERMP1Q7Z2K6 904 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 EMILIN2Q9BXX0 1053 aa9.5□□□□□ -0.89
CLK1-209ENST00000472679 MEGF11A6BM72 1044 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 PTPN11Q06124 597 aaPredicted RBP9.49□□□□□ -0.89
CLK1-209ENST00000472679 EXOSC6Q5RKV6 272 aaKnown RBP9.49□□□□□ -0.89
CLK1-209ENST00000472679 C9orf131Q5VYM1 1079 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 LLGL2Q6P1M3 1020 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms