RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 C17orf99Q6UX52 265 aa7.66□□□□□ -1.18
SIK3-208ENST00000472648 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.66□□□□□ -1.18
SIK3-208ENST00000472648 ANKLE1Q8NAG6 615 aa7.66□□□□□ -1.18
SIK3-208ENST00000472648 PLBD2Q8NHP8 589 aa7.66□□□□□ -1.18
SIK3-208ENST00000472648 ISCA1Q9BUE6 129 aa7.66□□□□□ -1.18
SIK3-208ENST00000472648 DOCK2Q92608 1830 aa7.66□□□□□ -1.18
SIK3-208ENST00000472648 SPDYE2BA6NHP3 402 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 SPDYE5A6NIY4 337 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 F8W031 263 aaPredicted RBP7.65□□□□□ -1.18
SIK3-208ENST00000472648 NCOR1O75376 2440 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 SPDYE6P0CI01 402 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 ELNP15502 786 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 CCT4P50991 539 aaKnown RBP7.65□□□□□ -1.18
SIK3-208ENST00000472648 RBM5P52756 815 aaKnown RBP eCLIP7.65□□□□□ -1.18
SIK3-208ENST00000472648 MAP3K9P80192 1104 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 CFAP100Q494V2 611 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 CCDC85AQ96PX6 553 aaPredicted RBP7.65□□□□□ -1.18
SIK3-208ENST00000472648 CDC5LQ99459 802 aaKnown RBP7.65□□□□□ -1.18
SIK3-208ENST00000472648 CDX2Q99626 313 aaPredicted RBP7.65□□□□□ -1.18
SIK3-208ENST00000472648 NBPF3Q9H094 633 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 CRISPLD2Q9H0B8 497 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 PAK6Q9NQU5 681 aaPredicted RBP7.65□□□□□ -1.18
SIK3-208ENST00000472648 PCDHAC2Q9Y5I4 1007 aa7.65□□□□□ -1.18
SIK3-208ENST00000472648 PLXNB2O15031 1838 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 PDE8AO60658 829 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 FOSL2P15408 326 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 MDM2Q00987 491 aaPredicted RBP7.64□□□□□ -1.19
SIK3-208ENST00000472648 ERO1BQ86YB8 467 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 ZBTB38Q8NAP3 1195 aaPredicted RBP7.64□□□□□ -1.19
SIK3-208ENST00000472648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.64□□□□□ -1.19
SIK3-208ENST00000472648 MYLIPQ8WY64 445 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 C11orf49Q9H6J7 331 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 GABRQQ9UN88 632 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 PHIPQ8WWQ0 1821 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 BDP1A6H8Y1 2624 aa7.64□□□□□ -1.19
SIK3-208ENST00000472648 PDHXO00330 501 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 IRF6O14896 467 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 TNNI2P48788 182 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 FLT3LGP49771 235 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 PPIL2Q13356 520 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 TXNRD3Q86VQ6 643 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 PXYLP1Q8TE99 480 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 PRMT6Q96LA8 375 aaPredicted RBP7.63□□□□□ -1.19
SIK3-208ENST00000472648 LBHD1Q9BQE6 289 aaPredicted RBP7.63□□□□□ -1.19
SIK3-208ENST00000472648 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.63□□□□□ -1.19
SIK3-208ENST00000472648 CHPF2Q9P2E5 772 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 TAOK2Q9UL54 1235 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 SNCAIPQ9Y6H5 919 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 DOCK1Q14185 1865 aa7.63□□□□□ -1.19
SIK3-208ENST00000472648 ATAD5Q96QE3 1844 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 AOX1Q06278 1338 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 SYNGAP1Q96PV0 1343 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 TNPO2O14787 897 aaKnown RBP7.62□□□□□ -1.19
SIK3-208ENST00000472648 KCNJ4P48050 445 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 TRIM28Q13263 835 aaKnown RBP7.62□□□□□ -1.19
SIK3-208ENST00000472648 SPDYE2Q495Y8 402 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 ANKRD23Q86SG2 305 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 CDAN1Q8IWY9 1227 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 CERS5Q8N5B7 392 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 WRNIP1Q96S55 665 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 PARK7Q99497 189 aaKnown RBP7.62□□□□□ -1.19
SIK3-208ENST00000472648 BSDC1Q9NW68 430 aaPredicted RBP7.62□□□□□ -1.19
SIK3-208ENST00000472648 MINPP1Q9UNW1 487 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 LEMD3Q9Y2U8 911 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 HCN4Q9Y3Q4 1203 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 RLFQ13129 1914 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 GBF1Q92538 1859 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 PLXNA1Q9UIW2 1896 aa7.62□□□□□ -1.19
SIK3-208ENST00000472648 MYO9BQ13459 2157 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 PER1O15534 1290 aaPredicted RBP7.61□□□□□ -1.19
SIK3-208ENST00000472648 BCRP11274 1271 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 KLRK1P26718 216 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 IRF5Q13568 498 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 NFE2L2Q16236 605 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.61□□□□□ -1.19
SIK3-208ENST00000472648 SNX27Q96L92 541 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 TEPSINQ96N21 525 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 TMEM39BQ9GZU3 492 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 SEMA6BQ9H3T3 888 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 ZNF70Q9UC06 446 aaPredicted RBP7.61□□□□□ -1.19
SIK3-208ENST00000472648 REV3LO60673 3130 aa7.61□□□□□ -1.19
SIK3-208ENST00000472648 MAPK8IP3Q9UPT6 1336 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 TCP10L2B9ZVM9 353 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 PCCAP05165 728 aaPredicted RBP7.6□□□□□ -1.19
SIK3-208ENST00000472648 CTSWP56202 376 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 FKBP1AP62942 108 aaKnown RBP7.6□□□□□ -1.19
SIK3-208ENST00000472648 PPATQ06203 517 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 RIC3Q7Z5B4 369 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 ZKSCAN4Q969J2 545 aaPredicted RBP7.6□□□□□ -1.19
SIK3-208ENST00000472648 HOOK2Q96ED9 719 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 ANKRD2Q9GZV1 360 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 TDRD3Q9H7E2 651 aaKnown RBP7.6□□□□□ -1.19
SIK3-208ENST00000472648 CD209Q9NNX6 404 aa7.6□□□□□ -1.19
SIK3-208ENST00000472648 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 PFASO15067 1338 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 HMGCRP04035 888 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 IGHMBP2P38935 993 aaKnown RBP7.59□□□□□ -1.19
SIK3-208ENST00000472648 GOLGA2Q08379 1002 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 HDGFL1Q5TGJ6 251 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 ZNF804AQ7Z570 1209 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms