RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 SSH1Q8WYL5 1049 aa23.86■■□□□ 1.41
RHBDF1-207ENST00000472390 PTPN18Q99952 460 aa23.86■■□□□ 1.41
RHBDF1-207ENST00000472390 MYH13Q9UKX3 1938 aa23.86■■□□□ 1.41
RHBDF1-207ENST00000472390 ZBTB48P10074 688 aaPredicted RBP23.85■■□□□ 1.41
RHBDF1-207ENST00000472390 IREB2P48200 963 aaKnown RBP23.85■■□□□ 1.41
RHBDF1-207ENST00000472390 CRHR2Q13324 411 aa23.85■■□□□ 1.41
RHBDF1-207ENST00000472390 SUPT20HL1Q3ZLR7 823 aa23.85■■□□□ 1.41
RHBDF1-207ENST00000472390 FBXO33Q7Z6M2 555 aa23.85■■□□□ 1.41
RHBDF1-207ENST00000472390 MROH5Q6ZUA9 1318 aa23.84■■□□□ 1.41
RHBDF1-207ENST00000472390 BCAMP50895 628 aa23.84■■□□□ 1.41
RHBDF1-207ENST00000472390 NOM1Q5C9Z4 860 aaKnown RBP23.84■■□□□ 1.41
RHBDF1-207ENST00000472390 CD99L2Q8TCZ2 262 aa23.84■■□□□ 1.41
RHBDF1-207ENST00000472390 SERPINA10Q9UK55 444 aa23.84■■□□□ 1.41
RHBDF1-207ENST00000472390 TRIM17Q9Y577 477 aa23.84■■□□□ 1.41
RHBDF1-207ENST00000472390 PKN2Q16513 984 aaKnown RBP23.83■■□□□ 1.41
RHBDF1-207ENST00000472390 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.83■■□□□ 1.41
RHBDF1-207ENST00000472390 OPTNQ96CV9 577 aa23.83■■□□□ 1.41
RHBDF1-207ENST00000472390 OTOP1Q7RTM1 612 aa23.82■■□□□ 1.4
RHBDF1-207ENST00000472390 ANKRD13AQ8IZ07 590 aa23.82■■□□□ 1.4
RHBDF1-207ENST00000472390 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
RHBDF1-207ENST00000472390 USP44Q9H0E7 712 aa23.82■■□□□ 1.4
RHBDF1-207ENST00000472390 VGLL4Q14135 290 aa23.81■■□□□ 1.4
RHBDF1-207ENST00000472390 VPS37DQ86XT2 251 aa23.81■■□□□ 1.4
RHBDF1-207ENST00000472390 ALDH1A1P00352 501 aa23.8■■□□□ 1.4
RHBDF1-207ENST00000472390 BRI3BPQ8WY22 251 aa23.8■■□□□ 1.4
RHBDF1-207ENST00000472390 FRAT2O75474 233 aaPredicted RBP23.79■■□□□ 1.4
RHBDF1-207ENST00000472390 PDE8BO95263 885 aa23.79■■□□□ 1.4
RHBDF1-207ENST00000472390 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
RHBDF1-207ENST00000472390 RFX5P48382 616 aaPredicted RBP23.79■■□□□ 1.4
RHBDF1-207ENST00000472390 TNFAIP1Q13829 316 aa23.79■■□□□ 1.4
RHBDF1-207ENST00000472390 MS4A4AQ96JQ5 239 aa23.79■■□□□ 1.4
RHBDF1-207ENST00000472390 CENPFP49454 3210 aa23.78■■□□□ 1.4
RHBDF1-207ENST00000472390 POTEFA5A3E0 1075 aa23.78■■□□□ 1.4
RHBDF1-207ENST00000472390 PTPRCP08575 1304 aa23.78■■□□□ 1.4
RHBDF1-207ENST00000472390 FGFR2P21802 821 aa23.77■■□□□ 1.4
RHBDF1-207ENST00000472390 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.77■■□□□ 1.4
RHBDF1-207ENST00000472390 OTUD5Q96G74 571 aa23.77■■□□□ 1.4
RHBDF1-207ENST00000472390 INHBEP58166 350 aa23.76■■□□□ 1.39
RHBDF1-207ENST00000472390 SLFN5Q08AF3 891 aa23.76■■□□□ 1.39
RHBDF1-207ENST00000472390 FAM43AQ8N2R8 423 aa23.76■■□□□ 1.39
RHBDF1-207ENST00000472390 KIAA0100Q14667 2235 aaKnown RBP23.76■■□□□ 1.39
RHBDF1-207ENST00000472390 CCL15-CCL14A0A0B4J2E2 113 aa23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 TESPA1A2RU30 521 aaPredicted RBP23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 CCL15Q16663 113 aa23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 CAVIN4Q5BKX8 364 aa23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 APOBEC3HQ6NTF7 200 aaKnown RBP23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 TEKT1Q969V4 418 aa23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 SIL1Q9H173 461 aa23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 SNCAIPQ9Y6H5 919 aa23.75■■□□□ 1.39
RHBDF1-207ENST00000472390 E9PSI1 815 aa23.74■■□□□ 1.39
RHBDF1-207ENST00000472390 MAP3K9P80192 1104 aa23.74■■□□□ 1.39
RHBDF1-207ENST00000472390 EYA2O00167 538 aa23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 ECM2O94769 699 aaPredicted RBP23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 PUM3Q15397 648 aaKnown RBP23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 DIXDC1Q155Q3 683 aa23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 ATG9AQ7Z3C6 839 aa23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 ZKSCAN4Q969J2 545 aaPredicted RBP23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 SMC4Q9NTJ3 1288 aa23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 PTPN22Q9Y2R2 807 aa23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 RBBP6Q7Z6E9 1792 aaKnown RBP23.73■■□□□ 1.39
RHBDF1-207ENST00000472390 MKI67P46013 3256 aaKnown RBP23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 UNCXA6NJT0 531 aa23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 TNNI2P48788 182 aa23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 TAF1CQ15572 869 aaPredicted RBP23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 PRPF38BQ5VTL8 546 aaKnown RBP23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 TBC1D22AQ8WUA7 517 aa23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 ERO1AQ96HE7 468 aa23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 ZDHHC15Q96MV8 337 aa23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 WRNIP1Q96S55 665 aa23.72■■□□□ 1.39
RHBDF1-207ENST00000472390 SP3Q02447 781 aa23.71■■□□□ 1.39
RHBDF1-207ENST00000472390 EFCC1Q9HA90 598 aa23.71■■□□□ 1.39
RHBDF1-207ENST00000472390 PA2G4Q9UQ80 394 aaKnown RBP23.71■■□□□ 1.39
RHBDF1-207ENST00000472390 BRCA2P51587 3418 aa23.71■■□□□ 1.39
RHBDF1-207ENST00000472390 IFIT1P09914 478 aaKnown RBP23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 PRDX5P30044 214 aa23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 HDLBPQ00341 1268 aaKnown RBP23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 OTUD7BQ6GQQ9 843 aa23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 MIGA2Q7L4E1 593 aa23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 ARHGAP39Q9C0H5 1083 aa23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 CSADQ9Y600 493 aa23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 AK9Q5TCS8 1911 aa23.7■■□□□ 1.38
RHBDF1-207ENST00000472390 SPDYE5A6NIY4 337 aa23.69■■□□□ 1.38
RHBDF1-207ENST00000472390 SLC5A1P13866 664 aa23.69■■□□□ 1.38
RHBDF1-207ENST00000472390 INPP5BP32019 993 aa23.69■■□□□ 1.38
RHBDF1-207ENST00000472390 NFIAQ12857 509 aa23.69■■□□□ 1.38
RHBDF1-207ENST00000472390 DAGLAQ9Y4D2 1042 aa23.69■■□□□ 1.38
RHBDF1-207ENST00000472390 MYCP01106 439 aaPredicted RBP23.68■■□□□ 1.38
RHBDF1-207ENST00000472390 TCP10Q12799 353 aa23.68■■□□□ 1.38
RHBDF1-207ENST00000472390 TMOD2Q9NZR1 351 aa23.68■■□□□ 1.38
RHBDF1-207ENST00000472390 PTCH2Q9Y6C5 1203 aa23.68■■□□□ 1.38
RHBDF1-207ENST00000472390 IRF6O14896 467 aa23.67■■□□□ 1.38
RHBDF1-207ENST00000472390 ADORA1P30542 326 aa23.67■■□□□ 1.38
RHBDF1-207ENST00000472390 GTF2A2P52657 109 aa23.67■■□□□ 1.38
RHBDF1-207ENST00000472390 LPIN2Q92539 896 aa23.67■■□□□ 1.38
RHBDF1-207ENST00000472390 NOB1Q9ULX3 412 aaKnown RBP23.67■■□□□ 1.38
RHBDF1-207ENST00000472390 LRRFIP2Q9Y608 721 aaKnown RBP23.67■■□□□ 1.38
RHBDF1-207ENST00000472390 KIF16BQ96L93 1317 aa23.66■■□□□ 1.38
RHBDF1-207ENST00000472390 SLURP2P0DP57 97 aa23.66■■□□□ 1.38
RHBDF1-207ENST00000472390 EN2P19622 333 aaPredicted RBP23.66■■□□□ 1.38
RHBDF1-207ENST00000472390 PHKA1P46020 1223 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms