RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 MTX1Q13505 466 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 KIF4BQ2VIQ3 1234 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 DACT2Q5SW24 774 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 C20orf194Q5TEA3 1177 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 STRIP1Q5VSL9 837 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
CLRN1-205ENST00000472224 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
CLRN1-205ENST00000472224 CDCA5Q96FF9 252 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 COPRSQ9NQ92 184 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 HDAC9Q9UKV0 1011 aa14.72□□□□□ -0.05
CLRN1-205ENST00000472224 IQSEC3Q9UPP2 1182 aaPredicted RBP14.72□□□□□ -0.05
CLRN1-205ENST00000472224 FRAT2O75474 233 aaPredicted RBP14.71□□□□□ -0.05
CLRN1-205ENST00000472224 CHAF1AQ13111 956 aaPredicted RBP14.71□□□□□ -0.05
CLRN1-205ENST00000472224 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.05
CLRN1-205ENST00000472224 CAVIN4Q5BKX8 364 aa14.71□□□□□ -0.05
CLRN1-205ENST00000472224 AGBL3Q8NEM8 1001 aa14.71□□□□□ -0.05
CLRN1-205ENST00000472224 GGA3Q9NZ52 723 aa14.71□□□□□ -0.05
CLRN1-205ENST00000472224 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
CLRN1-205ENST00000472224 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
CLRN1-205ENST00000472224 ZNF609O15014 1411 aa14.71□□□□□ -0.05
CLRN1-205ENST00000472224 MYO3BQ8WXR4 1341 aa14.7□□□□□ -0.06
CLRN1-205ENST00000472224 USP17L8P0C7I0 530 aa14.7□□□□□ -0.06
CLRN1-205ENST00000472224 IL1R1P14778 569 aa14.7□□□□□ -0.06
CLRN1-205ENST00000472224 KIAA0825Q8IV33 1275 aa14.7□□□□□ -0.06
CLRN1-205ENST00000472224 FAM84BQ96KN1 310 aaPredicted RBP14.7□□□□□ -0.06
CLRN1-205ENST00000472224 POTEFA5A3E0 1075 aa14.69□□□□□ -0.06
CLRN1-205ENST00000472224 F8W031 263 aaPredicted RBP14.69□□□□□ -0.06
CLRN1-205ENST00000472224 FGFR2P21802 821 aa14.69□□□□□ -0.06
CLRN1-205ENST00000472224 BCAMP50895 628 aa14.69□□□□□ -0.06
CLRN1-205ENST00000472224 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLRN1-205ENST00000472224 MOB2Q70IA6 237 aa14.69□□□□□ -0.06
CLRN1-205ENST00000472224 LPIN2Q92539 896 aa14.69□□□□□ -0.06
CLRN1-205ENST00000472224 GMLQ99445 158 aa14.69□□□□□ -0.06
CLRN1-205ENST00000472224 GPR25O00155 361 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 ATP8B2P98198 1209 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 TFCP2Q12800 502 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 CEP85Q6P2H3 762 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 SULF1Q8IWU6 871 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 R3HDMLQ9H3Y0 253 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 MYOZ2Q9NPC6 264 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 ECM29Q5VYK3 1845 aa14.68□□□□□ -0.06
CLRN1-205ENST00000472224 SURF6O75683 361 aaKnown RBP14.67□□□□□ -0.06
CLRN1-205ENST00000472224 ZNF280AP59817 542 aaPredicted RBP14.67□□□□□ -0.06
CLRN1-205ENST00000472224 PDE3AQ14432 1141 aa14.67□□□□□ -0.06
CLRN1-205ENST00000472224 NOM1Q5C9Z4 860 aaKnown RBP14.67□□□□□ -0.06
CLRN1-205ENST00000472224 MFSD14BQ5SR56 506 aa14.67□□□□□ -0.06
CLRN1-205ENST00000472224 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
CLRN1-205ENST00000472224 CERS5Q8N5B7 392 aa14.67□□□□□ -0.06
CLRN1-205ENST00000472224 TDRD7Q8NHU6 1098 aaKnown RBP14.67□□□□□ -0.06
CLRN1-205ENST00000472224 ADORA1P30542 326 aa14.66□□□□□ -0.06
CLRN1-205ENST00000472224 RRP1P56182 461 aaKnown RBP14.66□□□□□ -0.06
CLRN1-205ENST00000472224 SSH3Q8TE77 659 aa14.66□□□□□ -0.06
CLRN1-205ENST00000472224 CHMP4BQ9H444 224 aaKnown RBP14.66□□□□□ -0.06
CLRN1-205ENST00000472224 FAM205AQ6ZU69 1335 aa14.66□□□□□ -0.06
CLRN1-205ENST00000472224 A0A1B0GUL7 405 aa14.65□□□□□ -0.06
CLRN1-205ENST00000472224 SASH1O94885 1247 aa14.65□□□□□ -0.06
CLRN1-205ENST00000472224 TM4SF4P48230 202 aa14.65□□□□□ -0.06
CLRN1-205ENST00000472224 SCARF1Q14162 830 aa14.65□□□□□ -0.06
CLRN1-205ENST00000472224 ANGEL2Q5VTE6 544 aaKnown RBP14.65□□□□□ -0.06
CLRN1-205ENST00000472224 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
CLRN1-205ENST00000472224 AKAP2Q9Y2D5 859 aa14.65□□□□□ -0.06
CLRN1-205ENST00000472224 LAMB1P07942 1786 aa14.65□□□□□ -0.06
CLRN1-205ENST00000472224 COL1A1P02452 1464 aaPredicted RBP14.64□□□□□ -0.07
CLRN1-205ENST00000472224 PHKA1P46020 1223 aa14.64□□□□□ -0.07
CLRN1-205ENST00000472224 TIMM10P62072 90 aa14.64□□□□□ -0.07
CLRN1-205ENST00000472224 FKBP1BP68106 108 aa14.64□□□□□ -0.07
CLRN1-205ENST00000472224 GORABQ5T7V8 394 aa14.64□□□□□ -0.07
CLRN1-205ENST00000472224 ZBTB40Q9NUA8 1239 aa14.64□□□□□ -0.07
CLRN1-205ENST00000472224 GNL3LQ9NVN8 582 aaKnown RBP14.64□□□□□ -0.07
CLRN1-205ENST00000472224 SCAF8Q9UPN6 1271 aaKnown RBP14.64□□□□□ -0.07
CLRN1-205ENST00000472224 EXOC6BQ9Y2D4 811 aa14.64□□□□□ -0.07
CLRN1-205ENST00000472224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.64□□□□□ -0.07
CLRN1-205ENST00000472224 UBE2Q2LH0YL09 131 aa14.63□□□□□ -0.07
CLRN1-205ENST00000472224 APBB1O00213 710 aa14.63□□□□□ -0.07
CLRN1-205ENST00000472224 FKTNO75072 461 aa14.63□□□□□ -0.07
CLRN1-205ENST00000472224 RBM5P52756 815 aaKnown RBP eCLIP14.63□□□□□ -0.07
CLRN1-205ENST00000472224 FKBP1AP62942 108 aaKnown RBP14.63□□□□□ -0.07
CLRN1-205ENST00000472224 XAGE2Q96GT9 111 aa14.63□□□□□ -0.07
CLRN1-205ENST00000472224 CFHR5Q9BXR6 569 aa14.63□□□□□ -0.07
CLRN1-205ENST00000472224 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
CLRN1-205ENST00000472224 TTF2Q9UNY4 1162 aaKnown RBP14.63□□□□□ -0.07
CLRN1-205ENST00000472224 COLQQ9Y215 455 aaPredicted RBP14.63□□□□□ -0.07
CLRN1-205ENST00000472224 COL6A3P12111 3177 aa14.62□□□□□ -0.07
CLRN1-205ENST00000472224 HMMRO75330 724 aa14.62□□□□□ -0.07
CLRN1-205ENST00000472224 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
CLRN1-205ENST00000472224 DLGAP5Q15398 846 aa14.62□□□□□ -0.07
CLRN1-205ENST00000472224 NBPF9Q3BBW0 867 aa14.62□□□□□ -0.07
CLRN1-205ENST00000472224 CFAP100Q494V2 611 aa14.62□□□□□ -0.07
CLRN1-205ENST00000472224 CCDC102BQ68D86 513 aa14.62□□□□□ -0.07
CLRN1-205ENST00000472224 TBC1D22AQ8WUA7 517 aa14.62□□□□□ -0.07
CLRN1-205ENST00000472224 RANBP2P49792 3224 aaKnown RBP14.61□□□□□ -0.07
CLRN1-205ENST00000472224 WNT10BO00744 389 aa14.61□□□□□ -0.07
CLRN1-205ENST00000472224 GRIK5Q16478 980 aa14.61□□□□□ -0.07
CLRN1-205ENST00000472224 PCDHAC2Q9Y5I4 1007 aa14.61□□□□□ -0.07
CLRN1-205ENST00000472224 MYH2Q9UKX2 1941 aa14.6□□□□□ -0.07
CLRN1-205ENST00000472224 EN2P19622 333 aaPredicted RBP14.6□□□□□ -0.07
CLRN1-205ENST00000472224 TNNI3KQ59H18 835 aa14.6□□□□□ -0.07
CLRN1-205ENST00000472224 PRAMEF18Q5VWM3 479 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms