RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 KIAA0825Q8IV33 1275 aa20.38■□□□□ 0.85
CCM2-205ENST00000472223 EDC3Q96F86 508 aaKnown RBP20.38■□□□□ 0.85
CCM2-205ENST00000472223 PIH1D3Q9NQM4 214 aaKnown RBP20.38■□□□□ 0.85
CCM2-205ENST00000472223 COL1A1P02452 1464 aaPredicted RBP20.37■□□□□ 0.85
CCM2-205ENST00000472223 ZNF541Q9H0D2 1346 aa20.37■□□□□ 0.85
CCM2-205ENST00000472223 H7C1D1 291 aa20.37■□□□□ 0.85
CCM2-205ENST00000472223 USP17L8P0C7I0 530 aa20.37■□□□□ 0.85
CCM2-205ENST00000472223 SDSP20132 328 aa20.37■□□□□ 0.85
CCM2-205ENST00000472223 SLC9C2Q5TAH2 1124 aa20.37■□□□□ 0.85
CCM2-205ENST00000472223 NAA16Q6N069 864 aaPredicted RBP20.37■□□□□ 0.85
CCM2-205ENST00000472223 DPF2Q92785 391 aa20.37■□□□□ 0.85
CCM2-205ENST00000472223 ZBTB12Q9Y330 459 aaPredicted RBP20.37■□□□□ 0.85
CCM2-205ENST00000472223 GSPT1P15170 499 aaKnown RBP20.36■□□□□ 0.85
CCM2-205ENST00000472223 PRDX5P30044 214 aa20.36■□□□□ 0.85
CCM2-205ENST00000472223 RBM5P52756 815 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCM2-205ENST00000472223 MXD3Q9BW11 206 aa20.36■□□□□ 0.85
CCM2-205ENST00000472223 DIAPH3Q9NSV4 1193 aa20.36■□□□□ 0.85
CCM2-205ENST00000472223 GLTPD2A6NH11 291 aa20.35■□□□□ 0.85
CCM2-205ENST00000472223 DDNO94850 711 aaPredicted RBP20.35■□□□□ 0.85
CCM2-205ENST00000472223 GMPSP49915 693 aaPredicted RBP20.35■□□□□ 0.85
CCM2-205ENST00000472223 CERS5Q8N5B7 392 aa20.35■□□□□ 0.85
CCM2-205ENST00000472223 MAGEB6Q8N7X4 407 aa20.35■□□□□ 0.85
CCM2-205ENST00000472223 TEKT1Q969V4 418 aa20.35■□□□□ 0.85
CCM2-205ENST00000472223 RNF113AO15541 343 aaKnown RBP20.34■□□□□ 0.85
CCM2-205ENST00000472223 CYP7A1P22680 504 aa20.34■□□□□ 0.85
CCM2-205ENST00000472223 HDLBPQ00341 1268 aaKnown RBP20.34■□□□□ 0.85
CCM2-205ENST00000472223 MECOMQ03112 1051 aa20.34■□□□□ 0.85
CCM2-205ENST00000472223 MRIQ9BWK5 157 aa20.34■□□□□ 0.85
CCM2-205ENST00000472223 BAG3O95817 575 aa20.33■□□□□ 0.85
CCM2-205ENST00000472223 UBE3CQ15386 1083 aa20.33■□□□□ 0.85
CCM2-205ENST00000472223 RUFY2Q8WXA3 655 aa20.33■□□□□ 0.85
CCM2-205ENST00000472223 NSUN4Q96CB9 384 aaKnown RBP20.33■□□□□ 0.85
CCM2-205ENST00000472223 CNOT7Q9UIV1 285 aaKnown RBP20.33■□□□□ 0.85
CCM2-205ENST00000472223 SERPINA10Q9UK55 444 aa20.33■□□□□ 0.85
CCM2-205ENST00000472223 MYH7P12883 1935 aa20.33■□□□□ 0.84
CCM2-205ENST00000472223 RFX7Q2KHR2 1363 aa20.33■□□□□ 0.84
CCM2-205ENST00000472223 IQCA1LA6NCM1 817 aa20.32■□□□□ 0.84
CCM2-205ENST00000472223 PDE6AP16499 860 aa20.32■□□□□ 0.84
CCM2-205ENST00000472223 ADD2P35612 726 aa20.32■□□□□ 0.84
CCM2-205ENST00000472223 SCNN1DP51172 638 aa20.32■□□□□ 0.84
CCM2-205ENST00000472223 CERS3Q8IU89 383 aa20.32■□□□□ 0.84
CCM2-205ENST00000472223 GMLQ99445 158 aa20.32■□□□□ 0.84
CCM2-205ENST00000472223 DOCK2Q92608 1830 aa20.32■□□□□ 0.84
CCM2-205ENST00000472223 ZNF532Q9HCE3 1301 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 MYO5AQ9Y4I1 1855 aaKnown RBP20.31■□□□□ 0.84
CCM2-205ENST00000472223 MYO1BO43795 1136 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 CDC45O75419 566 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 CRKP46108 304 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 DLGAP5Q15398 846 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 HHIPL2Q6UWX4 724 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 MICALL2Q8IY33 904 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
CCM2-205ENST00000472223 MYH2Q9UKX2 1941 aa20.3■□□□□ 0.84
CCM2-205ENST00000472223 EIF5BO60841 1220 aaKnown RBP20.3■□□□□ 0.84
CCM2-205ENST00000472223 MFAP1P55081 439 aaKnown RBP20.3■□□□□ 0.84
CCM2-205ENST00000472223 APPBP2Q92624 585 aa20.3■□□□□ 0.84
CCM2-205ENST00000472223 FAM163AQ96GL9 167 aaPredicted RBP20.3■□□□□ 0.84
CCM2-205ENST00000472223 MROH7-TTC4A0A0A0MT08 1334 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 MAST2Q6P0Q8 1798 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 PLCG2P16885 1265 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 GRIK5Q16478 980 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 CFAP100Q494V2 611 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 AIDAQ96BJ3 306 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 MYOZ2Q9NPC6 264 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 HELLSQ9NRZ9 838 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 UTRNP46939 3433 aa20.29■□□□□ 0.84
CCM2-205ENST00000472223 ZNF646O15015 1829 aaPredicted RBP20.28■□□□□ 0.84
CCM2-205ENST00000472223 MAGEB6P1A0A0J9YX57 407 aa20.28■□□□□ 0.84
CCM2-205ENST00000472223 ZNF280AP59817 542 aaPredicted RBP20.28■□□□□ 0.84
CCM2-205ENST00000472223 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
CCM2-205ENST00000472223 RBM26Q5T8P6 1007 aaKnown RBP20.28■□□□□ 0.84
CCM2-205ENST00000472223 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
CCM2-205ENST00000472223 ZDHHC15Q96MV8 337 aa20.28■□□□□ 0.84
CCM2-205ENST00000472223 TMOD2Q9NZR1 351 aa20.28■□□□□ 0.84
CCM2-205ENST00000472223 MCMDC2Q4G0Z9 681 aa20.27■□□□□ 0.84
CCM2-205ENST00000472223 CWC27Q6UX04 472 aaKnown RBP20.27■□□□□ 0.84
CCM2-205ENST00000472223 ADARB2Q9NS39 739 aaKnown RBP20.27■□□□□ 0.84
CCM2-205ENST00000472223 CHMLP26374 656 aa20.26■□□□□ 0.83
CCM2-205ENST00000472223 BTDP43251 543 aa20.26■□□□□ 0.83
CCM2-205ENST00000472223 GPR75-ASB3A0A0A6YYF3 556 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 TCRBV5S4A2TA0A5A2 114 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 NMIQ13287 307 aaPredicted RBP20.25■□□□□ 0.83
CCM2-205ENST00000472223 KIF4BQ2VIQ3 1234 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 ZMYM1Q5SVZ6 1142 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 KIAA1211Q6ZU35 1233 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 MIGA1Q8NAN2 632 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 MTMR14Q8NCE2 650 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 DDRGK1Q96HY6 314 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 AATFQ9NY61 560 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCM2-205ENST00000472223 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 GAKO14976 1311 aa20.25■□□□□ 0.83
CCM2-205ENST00000472223 VEGFAP15692 232 aaPredicted RBP20.24■□□□□ 0.83
CCM2-205ENST00000472223 GNAT2P19087 354 aa20.24■□□□□ 0.83
CCM2-205ENST00000472223 EPS15P42566 896 aa20.24■□□□□ 0.83
CCM2-205ENST00000472223 TBC1D10BQ4KMP7 808 aaPredicted RBP20.24■□□□□ 0.83
CCM2-205ENST00000472223 PNMA8AQ86V59 439 aaPredicted RBP20.24■□□□□ 0.83
CCM2-205ENST00000472223 CRNKL1Q9BZJ0 848 aaKnown RBP20.24■□□□□ 0.83
CCM2-205ENST00000472223 USP40Q9NVE5 1235 aa20.24■□□□□ 0.83
CCM2-205ENST00000472223 SCN4AP35499 1836 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms