RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL4A3-205ENST00000471862 TTLL12Q14166 644 aaPredicted RBP14.36□□□□□ -0.11
COL4A3-205ENST00000471862 ATP2B3Q16720 1220 aa14.36□□□□□ -0.11
COL4A3-205ENST00000471862 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
COL4A3-205ENST00000471862 MRIQ9BWK5 157 aa14.36□□□□□ -0.11
COL4A3-205ENST00000471862 TDRD3Q9H7E2 651 aaKnown RBP14.36□□□□□ -0.11
COL4A3-205ENST00000471862 VEZTQ9HBM0 779 aa14.36□□□□□ -0.11
COL4A3-205ENST00000471862 CEP126Q9P2H0 1117 aa14.36□□□□□ -0.11
COL4A3-205ENST00000471862 SUGT1Q9Y2Z0 365 aa14.36□□□□□ -0.11
COL4A3-205ENST00000471862 OTOFQ9HC10 1997 aa14.36□□□□□ -0.11
COL4A3-205ENST00000471862 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
COL4A3-205ENST00000471862 FRAT2O75474 233 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-205ENST00000471862 PRKG1Q13976 671 aa14.35□□□□□ -0.11
COL4A3-205ENST00000471862 RASA3Q14644 834 aa14.35□□□□□ -0.11
COL4A3-205ENST00000471862 NBPF12Q5TAG4 269 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-205ENST00000471862 FRAT1Q92837 279 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-205ENST00000471862 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
COL4A3-205ENST00000471862 ANGEL1Q9UNK9 670 aaKnown RBP14.35□□□□□ -0.11
COL4A3-205ENST00000471862 FZD1Q9UP38 647 aa14.35□□□□□ -0.11
COL4A3-205ENST00000471862 CAPN15O75808 1086 aa14.34□□□□□ -0.11
COL4A3-205ENST00000471862 TNFAIP1Q13829 316 aa14.34□□□□□ -0.11
COL4A3-205ENST00000471862 ZKSCAN2Q63HK3 967 aa14.34□□□□□ -0.11
COL4A3-205ENST00000471862 CLUAP1Q96AJ1 413 aa14.34□□□□□ -0.11
COL4A3-205ENST00000471862 TEPSINQ96N21 525 aa14.34□□□□□ -0.11
COL4A3-205ENST00000471862 UNCXA6NJT0 531 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 SRGAP3O43295 1099 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 PPP1R12BO60237 982 aaPredicted RBP14.33□□□□□ -0.12
COL4A3-205ENST00000471862 TRPA1O75762 1119 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 TM4SF4P48230 202 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 SUPT20HL1Q3ZLR7 823 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 WDR66Q8TBY9 1149 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 TEKT1Q969V4 418 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 ZDHHC15Q96MV8 337 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 MAST3O60307 1309 aa14.33□□□□□ -0.12
COL4A3-205ENST00000471862 USP2O75604 605 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-205ENST00000471862 GNAI2P04899 355 aa14.32□□□□□ -0.12
COL4A3-205ENST00000471862 PHKA1P46020 1223 aa14.32□□□□□ -0.12
COL4A3-205ENST00000471862 SPRYD7Q5W111 196 aa14.32□□□□□ -0.12
COL4A3-205ENST00000471862 APOBEC3HQ6NTF7 200 aaKnown RBP14.32□□□□□ -0.12
COL4A3-205ENST00000471862 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
COL4A3-205ENST00000471862 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
COL4A3-205ENST00000471862 ABHD8Q96I13 439 aa14.32□□□□□ -0.12
COL4A3-205ENST00000471862 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
COL4A3-205ENST00000471862 PNMA6EA0A0J9YXQ4 647 aa14.31□□□□□ -0.12
COL4A3-205ENST00000471862 TCP10L2B9ZVM9 353 aa14.31□□□□□ -0.12
COL4A3-205ENST00000471862 SEMA3EO15041 775 aa14.31□□□□□ -0.12
COL4A3-205ENST00000471862 ADORA1P30542 326 aa14.31□□□□□ -0.12
COL4A3-205ENST00000471862 CLMNQ96JQ2 1002 aa14.31□□□□□ -0.12
COL4A3-205ENST00000471862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.31□□□□□ -0.12
COL4A3-205ENST00000471862 PRDX5P30044 214 aa14.3□□□□□ -0.12
COL4A3-205ENST00000471862 TFCP2Q12800 502 aa14.3□□□□□ -0.12
COL4A3-205ENST00000471862 MKRN3Q13064 507 aaKnown RBP14.3□□□□□ -0.12
COL4A3-205ENST00000471862 FKBP1CQ5VVH2 108 aa14.3□□□□□ -0.12
COL4A3-205ENST00000471862 CCDC102BQ68D86 513 aa14.3□□□□□ -0.12
COL4A3-205ENST00000471862 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
COL4A3-205ENST00000471862 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
COL4A3-205ENST00000471862 DENND2AQ9ULE3 1009 aa14.3□□□□□ -0.12
COL4A3-205ENST00000471862 MYH2Q9UKX2 1941 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 A0A1B0GUL7 405 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-205ENST00000471862 RLBP1P12271 317 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 IREB2P48200 963 aaKnown RBP14.29□□□□□ -0.12
COL4A3-205ENST00000471862 TNNI2P48788 182 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 CACNB3P54284 484 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 TIMM10P62072 90 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 SREBF2Q12772 1141 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 ANKRD13AQ8IZ07 590 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 SLC10A4Q96EP9 437 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 WNK4Q96J92 1243 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 CFHR5Q9BXR6 569 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 MCOLN1Q9GZU1 580 aa14.29□□□□□ -0.12
COL4A3-205ENST00000471862 PDS5AQ29RF7 1337 aaKnown RBP14.29□□□□□ -0.12
COL4A3-205ENST00000471862 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-205ENST00000471862 GJA5P36382 358 aa14.28□□□□□ -0.12
COL4A3-205ENST00000471862 RASGRF1Q13972 1273 aa14.28□□□□□ -0.12
COL4A3-205ENST00000471862 POLA2Q14181 598 aa14.28□□□□□ -0.12
COL4A3-205ENST00000471862 XAGE2Q96GT9 111 aa14.28□□□□□ -0.12
COL4A3-205ENST00000471862 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
COL4A3-205ENST00000471862 DAGLAQ9Y4D2 1042 aa14.28□□□□□ -0.12
COL4A3-205ENST00000471862 MANSC4A6NHS7 340 aaPredicted RBP14.27□□□□□ -0.13
COL4A3-205ENST00000471862 LDHBP07195 334 aaKnown RBP14.27□□□□□ -0.13
COL4A3-205ENST00000471862 DIXDC1Q155Q3 683 aa14.27□□□□□ -0.13
COL4A3-205ENST00000471862 NOM1Q5C9Z4 860 aaKnown RBP14.27□□□□□ -0.13
COL4A3-205ENST00000471862 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.27□□□□□ -0.13
COL4A3-205ENST00000471862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL4A3-205ENST00000471862 SSH3Q8TE77 659 aa14.27□□□□□ -0.13
COL4A3-205ENST00000471862 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.13
COL4A3-205ENST00000471862 ZBTB7BO15156 539 aaPredicted RBP14.26□□□□□ -0.13
COL4A3-205ENST00000471862 TBC1D8O95759 1140 aa14.26□□□□□ -0.13
COL4A3-205ENST00000471862 INHBEP58166 350 aa14.26□□□□□ -0.13
COL4A3-205ENST00000471862 ATP8B2P98198 1209 aa14.26□□□□□ -0.13
COL4A3-205ENST00000471862 DGKZQ13574 1117 aa14.26□□□□□ -0.13
COL4A3-205ENST00000471862 MVPQ14764 893 aaKnown RBP14.26□□□□□ -0.13
COL4A3-205ENST00000471862 FTSJ3Q8IY81 847 aaKnown RBP14.26□□□□□ -0.13
COL4A3-205ENST00000471862 RFX7Q2KHR2 1363 aa14.25□□□□□ -0.13
COL4A3-205ENST00000471862 GAKO14976 1311 aa14.25□□□□□ -0.13
COL4A3-205ENST00000471862 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
COL4A3-205ENST00000471862 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms