RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
LINC00888-202ENST00000471496 SAMD7Q7Z3H4 446 aa15.37■□□□□ 0.05
LINC00888-202ENST00000471496 CERS5Q8N5B7 392 aa15.37■□□□□ 0.05
LINC00888-202ENST00000471496 LPIN2Q92539 896 aa15.37■□□□□ 0.05
LINC00888-202ENST00000471496 PGAP2Q9UHJ9 254 aa15.37■□□□□ 0.05
LINC00888-202ENST00000471496 FAM205AQ6ZU69 1335 aa15.36■□□□□ 0.05
LINC00888-202ENST00000471496 SASH1O94885 1247 aa15.36■□□□□ 0.05
LINC00888-202ENST00000471496 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
LINC00888-202ENST00000471496 BCAMP50895 628 aa15.36■□□□□ 0.05
LINC00888-202ENST00000471496 TFCP2Q12800 502 aa15.36■□□□□ 0.05
LINC00888-202ENST00000471496 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
LINC00888-202ENST00000471496 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
LINC00888-202ENST00000471496 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
LINC00888-202ENST00000471496 H7C1D1 291 aa15.35■□□□□ 0.05
LINC00888-202ENST00000471496 IFIT1P09914 478 aaKnown RBP15.35■□□□□ 0.05
LINC00888-202ENST00000471496 HSPA6P17066 643 aa15.35■□□□□ 0.05
LINC00888-202ENST00000471496 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
LINC00888-202ENST00000471496 MYO3BQ8WXR4 1341 aa15.35■□□□□ 0.05
LINC00888-202ENST00000471496 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
LINC00888-202ENST00000471496 SLC5A1P13866 664 aa15.34■□□□□ 0.05
LINC00888-202ENST00000471496 TBC1D10BQ4KMP7 808 aaPredicted RBP15.34■□□□□ 0.05
LINC00888-202ENST00000471496 FBXW7Q969H0 707 aa15.34■□□□□ 0.05
LINC00888-202ENST00000471496 IQSEC3Q9UPP2 1182 aaPredicted RBP15.34■□□□□ 0.05
LINC00888-202ENST00000471496 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
LINC00888-202ENST00000471496 COL1A1P02452 1464 aaPredicted RBP15.34■□□□□ 0.05
LINC00888-202ENST00000471496 PASKQ96RG2 1323 aa15.34■□□□□ 0.05
LINC00888-202ENST00000471496 TRPM7Q96QT4 1865 aa15.34■□□□□ 0.05
LINC00888-202ENST00000471496 ADORA1P30542 326 aa15.33■□□□□ 0.05
LINC00888-202ENST00000471496 TIMM10P62072 90 aa15.33■□□□□ 0.05
LINC00888-202ENST00000471496 FKBP1AP62942 108 aaKnown RBP15.33■□□□□ 0.05
LINC00888-202ENST00000471496 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.05
LINC00888-202ENST00000471496 ECM29Q5VYK3 1845 aa15.33■□□□□ 0.05
LINC00888-202ENST00000471496 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.04
LINC00888-202ENST00000471496 G3BP1Q13283 466 aaKnown RBP eCLIP15.33■□□□□ 0.04
LINC00888-202ENST00000471496 KIF4BQ2VIQ3 1234 aa15.33■□□□□ 0.04
LINC00888-202ENST00000471496 CNTROBQ8N137 903 aa15.33■□□□□ 0.04
LINC00888-202ENST00000471496 ZC3H15Q8WU90 426 aaKnown RBP15.33■□□□□ 0.04
LINC00888-202ENST00000471496 ASTN2O75129 1339 aaPredicted RBP15.32■□□□□ 0.04
LINC00888-202ENST00000471496 A0A1B0GUL7 405 aa15.32■□□□□ 0.04
LINC00888-202ENST00000471496 PHKA1P46020 1223 aa15.32■□□□□ 0.04
LINC00888-202ENST00000471496 RBM26Q5T8P6 1007 aaKnown RBP15.32■□□□□ 0.04
LINC00888-202ENST00000471496 TMEM92Q6UXU6 159 aa15.32■□□□□ 0.04
LINC00888-202ENST00000471496 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
LINC00888-202ENST00000471496 KIAA0825Q8IV33 1275 aa15.32■□□□□ 0.04
LINC00888-202ENST00000471496 RPAP2Q8IXW5 612 aaPredicted RBP15.32■□□□□ 0.04
LINC00888-202ENST00000471496 MYOZ2Q9NPC6 264 aa15.32■□□□□ 0.04
LINC00888-202ENST00000471496 HOXB3P14651 431 aaPredicted RBP15.31■□□□□ 0.04
LINC00888-202ENST00000471496 FMR1Q06787 632 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC00888-202ENST00000471496 GRIK5Q16478 980 aa15.31■□□□□ 0.04
LINC00888-202ENST00000471496 ZNF710Q8N1W2 664 aa15.31■□□□□ 0.04
LINC00888-202ENST00000471496 ZBED3Q96IU2 234 aaPredicted RBP15.31■□□□□ 0.04
LINC00888-202ENST00000471496 CHMP4BQ9H444 224 aaKnown RBP15.31■□□□□ 0.04
LINC00888-202ENST00000471496 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
LINC00888-202ENST00000471496 APLP1P51693 650 aa15.3■□□□□ 0.04
LINC00888-202ENST00000471496 MFSD14BQ5SR56 506 aa15.3■□□□□ 0.04
LINC00888-202ENST00000471496 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
LINC00888-202ENST00000471496 XAGE2Q96GT9 111 aa15.3■□□□□ 0.04
LINC00888-202ENST00000471496 GPR108Q9NPR9 543 aa15.3■□□□□ 0.04
LINC00888-202ENST00000471496 RYDENQ9NUL5 291 aaKnown RBP15.3■□□□□ 0.04
LINC00888-202ENST00000471496 EXOC6BQ9Y2D4 811 aa15.3■□□□□ 0.04
LINC00888-202ENST00000471496 AKAP11Q9UKA4 1901 aa15.3■□□□□ 0.04
LINC00888-202ENST00000471496 TRAF5O00463 557 aa15.29■□□□□ 0.04
LINC00888-202ENST00000471496 MMP14P50281 582 aa15.29■□□□□ 0.04
LINC00888-202ENST00000471496 HTRA3P83110 453 aa15.29■□□□□ 0.04
LINC00888-202ENST00000471496 NBPF9Q3BBW0 867 aa15.29■□□□□ 0.04
LINC00888-202ENST00000471496 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
LINC00888-202ENST00000471496 WNT10BO00744 389 aa15.28■□□□□ 0.04
LINC00888-202ENST00000471496 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
LINC00888-202ENST00000471496 SCARF1Q14162 830 aa15.28■□□□□ 0.04
LINC00888-202ENST00000471496 TNNI3KQ59H18 835 aa15.28■□□□□ 0.04
LINC00888-202ENST00000471496 DLK2Q6UY11 383 aa15.28■□□□□ 0.04
LINC00888-202ENST00000471496 OGFOD1Q8N543 542 aa15.28■□□□□ 0.04
LINC00888-202ENST00000471496 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
LINC00888-202ENST00000471496 FPGT-TNNI3KV9GXZ4 949 aa15.28■□□□□ 0.04
LINC00888-202ENST00000471496 F8W031 263 aaPredicted RBP15.27■□□□□ 0.04
LINC00888-202ENST00000471496 MTMR14Q8NCE2 650 aa15.27■□□□□ 0.04
LINC00888-202ENST00000471496 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
LINC00888-202ENST00000471496 GGA3Q9NZ52 723 aa15.27■□□□□ 0.04
LINC00888-202ENST00000471496 AOX1Q06278 1338 aa15.27■□□□□ 0.04
LINC00888-202ENST00000471496 SEMA3EO15041 775 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.03
LINC00888-202ENST00000471496 EMP3P54852 163 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.03
LINC00888-202ENST00000471496 RASGRF1Q13972 1273 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 CDAN1Q8IWY9 1227 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 TBC1D22AQ8WUA7 517 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 EAF2Q96CJ1 260 aaPredicted RBP15.27■□□□□ 0.03
LINC00888-202ENST00000471496 NEUROD6Q96NK8 337 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 HDAC9Q9UKV0 1011 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.03
LINC00888-202ENST00000471496 MYO5AQ9Y4I1 1855 aaKnown RBP15.26■□□□□ 0.03
LINC00888-202ENST00000471496 HMMRO75330 724 aa15.26■□□□□ 0.03
LINC00888-202ENST00000471496 ANGEL2Q5VTE6 544 aaKnown RBP15.26■□□□□ 0.03
LINC00888-202ENST00000471496 CST9Q5W186 159 aa15.26■□□□□ 0.03
LINC00888-202ENST00000471496 CDC37L1Q7L3B6 337 aa15.26■□□□□ 0.03
LINC00888-202ENST00000471496 DNAJC5GQ8N7S2 189 aa15.26■□□□□ 0.03
LINC00888-202ENST00000471496 MARVELD3Q96A59 401 aa15.26■□□□□ 0.03
LINC00888-202ENST00000471496 DBNDD2Q9BQY9 259 aa15.26■□□□□ 0.03
LINC00888-202ENST00000471496 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
LINC00888-202ENST00000471496 TTF2Q9UNY4 1162 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms