RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PRDX5P30044 214 aa11.68□□□□□ -0.54
CCM2-204ENST00000470837 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
CCM2-204ENST00000470837 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
CCM2-204ENST00000470837 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
CCM2-204ENST00000470837 COL1A1P02452 1464 aaPredicted RBP11.68□□□□□ -0.54
CCM2-204ENST00000470837 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 M0R2C6 588 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 MBD4O95243 580 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 PLCG2P16885 1265 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 RBM25P49756 843 aaKnown RBP11.67□□□□□ -0.54
CCM2-204ENST00000470837 FKBP1AP62942 108 aaKnown RBP11.67□□□□□ -0.54
CCM2-204ENST00000470837 CCDC129Q6ZRS4 1044 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 ZNF589Q86UQ0 364 aaPredicted RBP11.67□□□□□ -0.54
CCM2-204ENST00000470837 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 NSUN4Q96CB9 384 aaKnown RBP11.67□□□□□ -0.54
CCM2-204ENST00000470837 DSCC1Q9BVC3 393 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 LSG1Q9H089 658 aaKnown RBP11.67□□□□□ -0.54
CCM2-204ENST00000470837 PUS7LQ9H0K6 701 aaKnown RBP11.67□□□□□ -0.54
CCM2-204ENST00000470837 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
CCM2-204ENST00000470837 A0A1B0GUL6 1792 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
CCM2-204ENST00000470837 MYO3BQ8WXR4 1341 aa11.66□□□□□ -0.54
CCM2-204ENST00000470837 TCRBV5S4A2TA0A5A2 114 aa11.66□□□□□ -0.54
CCM2-204ENST00000470837 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
CCM2-204ENST00000470837 TNIP1Q15025 636 aa11.66□□□□□ -0.54
CCM2-204ENST00000470837 SLFNL1Q499Z3 407 aa11.66□□□□□ -0.54
CCM2-204ENST00000470837 MAP4K1Q92918 833 aa11.66□□□□□ -0.54
CCM2-204ENST00000470837 CRNKL1Q9BZJ0 848 aaKnown RBP11.66□□□□□ -0.54
CCM2-204ENST00000470837 HDAC9Q9UKV0 1011 aa11.66□□□□□ -0.54
CCM2-204ENST00000470837 TTF2Q9UNY4 1162 aaKnown RBP11.66□□□□□ -0.54
CCM2-204ENST00000470837 RBM8AQ9Y5S9 174 aaKnown RBP11.66□□□□□ -0.54
CCM2-204ENST00000470837 SLC4A4Q9Y6R1 1079 aa11.66□□□□□ -0.54
CCM2-204ENST00000470837 NFKBIEO00221 500 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 CHGBP05060 677 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 HSPD1P10809 573 aaKnown RBP11.65□□□□□ -0.54
CCM2-204ENST00000470837 HSPA4P34932 840 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 TDO2P48775 406 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 RBM5P52756 815 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCM2-204ENST00000470837 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
CCM2-204ENST00000470837 ANAPC15P60006 121 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 PTH1RQ03431 593 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 KRT32Q14532 448 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 IMMTQ16891 758 aaKnown RBP11.65□□□□□ -0.54
CCM2-204ENST00000470837 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 OGFOD1Q8N543 542 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 STRBPQ96SI9 672 aaKnown RBP11.65□□□□□ -0.54
CCM2-204ENST00000470837 IL25Q9H293 177 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 ARMT1Q9H993 441 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 LTBP1Q14766 1721 aa11.65□□□□□ -0.54
CCM2-204ENST00000470837 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.55
CCM2-204ENST00000470837 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 SNED1Q8TER0 1413 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
CCM2-204ENST00000470837 RAD17O75943 681 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 PSMA5P28066 241 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 GPR162Q16538 588 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 DACT2Q5SW24 774 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 CIAPIN1Q6FI81 312 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 TEKT1Q969V4 418 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 NAPBQ9H115 298 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 AATFQ9NY61 560 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCM2-204ENST00000470837 AK9Q5TCS8 1911 aa11.64□□□□□ -0.55
CCM2-204ENST00000470837 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 ST18O60284 1047 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 LMNB1P20700 586 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 USP5P45974 858 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 RASSF7Q02833 373 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 BECN1Q14457 450 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 RABEP1Q15276 862 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 DIXDC1Q155Q3 683 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 RSBN1LQ6PCB5 846 aaPredicted RBP11.63□□□□□ -0.55
CCM2-204ENST00000470837 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 LCORLQ8N3X6 602 aa11.63□□□□□ -0.55
CCM2-204ENST00000470837 YDJCA8MPS7 323 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 PSMD14O00487 310 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 ZNF213O14771 459 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 SLC27A2O14975 620 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
CCM2-204ENST00000470837 BTDP43251 543 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 MMP14P50281 582 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 SCNN1DP51172 638 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 HDLBPQ00341 1268 aaKnown RBP11.62□□□□□ -0.55
CCM2-204ENST00000470837 VPS53Q5VIR6 699 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 HHIPL2Q6UWX4 724 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 AGBL3Q8NEM8 1001 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 FAM163AQ96GL9 167 aaPredicted RBP11.62□□□□□ -0.55
CCM2-204ENST00000470837 MXD3Q9BW11 206 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 MRIQ9BWK5 157 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 KCNQ5Q9NR82 932 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 SERPINA10Q9UK55 444 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
CCM2-204ENST00000470837 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 FGAP02671 866 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms