RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 SPATA5Q8NB90 893 aa11.81□□□□□ -0.52
NXF3-205ENST00000470724 TEKT1Q969V4 418 aa11.81□□□□□ -0.52
NXF3-205ENST00000470724 DBNLQ9UJU6 430 aaKnown RBP11.81□□□□□ -0.52
NXF3-205ENST00000470724 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
NXF3-205ENST00000470724 PCDHAC2Q9Y5I4 1007 aa11.81□□□□□ -0.52
NXF3-205ENST00000470724 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 TMEM88BA6NKF7 163 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
NXF3-205ENST00000470724 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 PI16Q6UXB8 463 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 ERICH6Q7L0X2 663 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 APOBEC3FQ8IUX4 373 aaKnown RBP11.8□□□□□ -0.52
NXF3-205ENST00000470724 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 HMG20BQ9P0W2 317 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 LRP2BPQ9P2M1 347 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 SERPINA10Q9UK55 444 aa11.8□□□□□ -0.52
NXF3-205ENST00000470724 A0A1B0GUL6 1792 aa11.79□□□□□ -0.52
NXF3-205ENST00000470724 SCN9AQ15858 1988 aa11.79□□□□□ -0.52
NXF3-205ENST00000470724 COL1A1P02452 1464 aaPredicted RBP11.79□□□□□ -0.52
NXF3-205ENST00000470724 ARID4AP29374 1257 aaPredicted RBP11.79□□□□□ -0.52
NXF3-205ENST00000470724 PRDX5P30044 214 aa11.79□□□□□ -0.52
NXF3-205ENST00000470724 MCAMP43121 646 aa11.79□□□□□ -0.52
NXF3-205ENST00000470724 DIXDC1Q155Q3 683 aa11.79□□□□□ -0.52
NXF3-205ENST00000470724 PRAMEF18Q5VWM3 479 aa11.79□□□□□ -0.52
NXF3-205ENST00000470724 PRMT6Q96LA8 375 aaPredicted RBP11.79□□□□□ -0.52
NXF3-205ENST00000470724 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
NXF3-205ENST00000470724 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
NXF3-205ENST00000470724 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
NXF3-205ENST00000470724 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
NXF3-205ENST00000470724 TCP10L2B9ZVM9 353 aa11.78□□□□□ -0.52
NXF3-205ENST00000470724 NF2P35240 595 aa11.78□□□□□ -0.52
NXF3-205ENST00000470724 PRKG1Q13976 671 aa11.78□□□□□ -0.52
NXF3-205ENST00000470724 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
NXF3-205ENST00000470724 CDCA5Q96FF9 252 aa11.78□□□□□ -0.52
NXF3-205ENST00000470724 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
NXF3-205ENST00000470724 RWDD1Q9H446 243 aaPredicted RBP11.78□□□□□ -0.52
NXF3-205ENST00000470724 PGAP2Q9UHJ9 254 aa11.78□□□□□ -0.52
NXF3-205ENST00000470724 SUGT1Q9Y2Z0 365 aa11.78□□□□□ -0.52
NXF3-205ENST00000470724 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.53
NXF3-205ENST00000470724 ZAP70P43403 619 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 TNNI2P48788 182 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 CACNB3P54284 484 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 GSTO1P78417 241 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 C2orf69Q8N8R5 385 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 MTMR14Q8NCE2 650 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 GPATCH3Q96I76 525 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 CREBZFQ9NS37 354 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
NXF3-205ENST00000470724 NDUFB9Q9Y6M9 179 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
NXF3-205ENST00000470724 HDLBPQ00341 1268 aaKnown RBP11.76□□□□□ -0.53
NXF3-205ENST00000470724 AAMPQ13685 434 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 TNFAIP1Q13829 316 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 USP40Q9NVE5 1235 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 DAGLAQ9Y4D2 1042 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 AOX1Q06278 1338 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 PDS5AQ29RF7 1337 aaKnown RBP11.76□□□□□ -0.53
NXF3-205ENST00000470724 SALL1Q9NSC2 1324 aa11.76□□□□□ -0.53
NXF3-205ENST00000470724 CENPBP07199 599 aaPredicted RBP11.75□□□□□ -0.53
NXF3-205ENST00000470724 LDHCP07864 332 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 HUNKP57058 714 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 MECOMQ03112 1051 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 RASA3Q14644 834 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 NAA16Q6N069 864 aaPredicted RBP11.75□□□□□ -0.53
NXF3-205ENST00000470724 HHIPL2Q6UWX4 724 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 ZBED3Q96IU2 234 aaPredicted RBP11.75□□□□□ -0.53
NXF3-205ENST00000470724 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
NXF3-205ENST00000470724 GBA2Q9HCG7 927 aaPredicted RBP11.75□□□□□ -0.53
NXF3-205ENST00000470724 GOLIM4O00461 696 aa11.74□□□□□ -0.53
NXF3-205ENST00000470724 CYP2E1P05181 493 aaPredicted RBP11.74□□□□□ -0.53
NXF3-205ENST00000470724 NEFLP07196 543 aa11.74□□□□□ -0.53
NXF3-205ENST00000470724 BTDP43251 543 aa11.74□□□□□ -0.53
NXF3-205ENST00000470724 PICALMQ13492 652 aa11.74□□□□□ -0.53
NXF3-205ENST00000470724 DEFB115Q30KQ5 88 aa11.74□□□□□ -0.53
NXF3-205ENST00000470724 CST9Q5W186 159 aa11.74□□□□□ -0.53
NXF3-205ENST00000470724 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
NXF3-205ENST00000470724 ZNF512BQ96KM6 892 aaPredicted RBP11.74□□□□□ -0.53
NXF3-205ENST00000470724 PIH1D3Q9NQM4 214 aaKnown RBP11.74□□□□□ -0.53
NXF3-205ENST00000470724 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 CYP7A1P22680 504 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 TCP10Q12799 353 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 MAP3K12Q12852 859 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 HDAC1Q13547 482 aaPredicted RBP11.73□□□□□ -0.53
NXF3-205ENST00000470724 SUPT20HL1Q3ZLR7 823 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 TSHZ3Q63HK5 1081 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
NXF3-205ENST00000470724 CDC42EP5Q6NZY7 148 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
NXF3-205ENST00000470724 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
NXF3-205ENST00000470724 UBE2Q2LH0YL09 131 aa11.72□□□□□ -0.53
NXF3-205ENST00000470724 BAG3O95817 575 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms