RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 MAP4K4O95819 1239 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-208ENST00000470458 EGFRP00533 1210 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
RFTN1-208ENST00000470458 VEGFBP49765 207 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 HTRA3P83110 453 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 RGMBQ6NW40 437 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 TMED8Q6PL24 325 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-208ENST00000470458 CERS5Q8N5B7 392 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 NEUROD6Q96NK8 337 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 MXD3Q9BW11 206 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
RFTN1-208ENST00000470458 ZNF646O15015 1829 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-208ENST00000470458 ARAP2Q8WZ64 1704 aa13.39□□□□□ -0.27
RFTN1-208ENST00000470458 CRKP46108 304 aa13.38□□□□□ -0.27
RFTN1-208ENST00000470458 GSTO1P78417 241 aa13.38□□□□□ -0.27
RFTN1-208ENST00000470458 TFCP2Q12800 502 aa13.38□□□□□ -0.27
RFTN1-208ENST00000470458 TTLL12Q14166 644 aaPredicted RBP13.38□□□□□ -0.27
RFTN1-208ENST00000470458 CCDC102BQ68D86 513 aa13.38□□□□□ -0.27
RFTN1-208ENST00000470458 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
RFTN1-208ENST00000470458 ZDHHC15Q96MV8 337 aa13.38□□□□□ -0.27
RFTN1-208ENST00000470458 DEFB129Q9H1M3 183 aa13.38□□□□□ -0.27
RFTN1-208ENST00000470458 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
RFTN1-208ENST00000470458 ADM5C9JUS6 153 aa13.37□□□□□ -0.27
RFTN1-208ENST00000470458 LDHCP07864 332 aa13.37□□□□□ -0.27
RFTN1-208ENST00000470458 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
RFTN1-208ENST00000470458 AAMPQ13685 434 aa13.37□□□□□ -0.27
RFTN1-208ENST00000470458 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
RFTN1-208ENST00000470458 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
RFTN1-208ENST00000470458 PAPPA2Q9BXP8 1791 aa13.37□□□□□ -0.27
RFTN1-208ENST00000470458 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
RFTN1-208ENST00000470458 RLBP1P12271 317 aa13.36□□□□□ -0.27
RFTN1-208ENST00000470458 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
RFTN1-208ENST00000470458 TIMM10P62072 90 aa13.36□□□□□ -0.27
RFTN1-208ENST00000470458 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
RFTN1-208ENST00000470458 FAM83AQ86UY5 434 aa13.36□□□□□ -0.27
RFTN1-208ENST00000470458 ZNF512BQ96KM6 892 aaPredicted RBP13.36□□□□□ -0.27
RFTN1-208ENST00000470458 ZBTB40Q9NUA8 1239 aa13.36□□□□□ -0.27
RFTN1-208ENST00000470458 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
RFTN1-208ENST00000470458 CEP85Q6P2H3 762 aa13.35□□□□□ -0.27
RFTN1-208ENST00000470458 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
RFTN1-208ENST00000470458 DZIP1Q86YF9 867 aaKnown RBP13.35□□□□□ -0.27
RFTN1-208ENST00000470458 CERS3Q8IU89 383 aa13.35□□□□□ -0.27
RFTN1-208ENST00000470458 VEZTQ9HBM0 779 aa13.35□□□□□ -0.27
RFTN1-208ENST00000470458 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
RFTN1-208ENST00000470458 IQSEC3Q9UPP2 1182 aaPredicted RBP13.35□□□□□ -0.27
RFTN1-208ENST00000470458 INHBEP58166 350 aa13.34□□□□□ -0.27
RFTN1-208ENST00000470458 TTC39AQ5SRH9 613 aa13.34□□□□□ -0.27
RFTN1-208ENST00000470458 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
RFTN1-208ENST00000470458 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
RFTN1-208ENST00000470458 WBP1LQ9NX94 342 aa13.34□□□□□ -0.27
RFTN1-208ENST00000470458 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
RFTN1-208ENST00000470458 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
RFTN1-208ENST00000470458 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
RFTN1-208ENST00000470458 HSPA1AP0DMV8 641 aaKnown RBP13.33□□□□□ -0.28
RFTN1-208ENST00000470458 HSPA1BP0DMV9 641 aaKnown RBP13.33□□□□□ -0.28
RFTN1-208ENST00000470458 ARID4AP29374 1257 aaPredicted RBP13.33□□□□□ -0.28
RFTN1-208ENST00000470458 PHKA1P46020 1223 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 RASA3Q14644 834 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 DCAF15Q66K64 600 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 CYP4F22Q6NT55 531 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 SPATA5Q8NB90 893 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 KIF1BPQ96EK5 621 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
RFTN1-208ENST00000470458 PRDM10Q9NQV6 1147 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 ABCF2Q9UG63 623 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 AKAP11Q9UKA4 1901 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 CEP350Q5VT06 3117 aa13.33□□□□□ -0.28
RFTN1-208ENST00000470458 PLCG2P16885 1265 aa13.32□□□□□ -0.28
RFTN1-208ENST00000470458 GRM1Q13255 1194 aa13.32□□□□□ -0.28
RFTN1-208ENST00000470458 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
RFTN1-208ENST00000470458 SAGE1Q9NXZ1 904 aa13.32□□□□□ -0.28
RFTN1-208ENST00000470458 ASTN2O75129 1339 aaPredicted RBP13.32□□□□□ -0.28
RFTN1-208ENST00000470458 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 MYH2Q9UKX2 1941 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 CLRN2A0PK11 232 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 BAG3O95817 575 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 SLC10A3P09131 477 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
RFTN1-208ENST00000470458 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 RASGRF1Q13972 1273 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 TTF1Q15361 905 aaPredicted RBP13.31□□□□□ -0.28
RFTN1-208ENST00000470458 OTUD7BQ6GQQ9 843 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 ANKRD13AQ8IZ07 590 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 SLC10A4Q96EP9 437 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
RFTN1-208ENST00000470458 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 WDHD1O75717 1129 aaPredicted RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 ALDH1A1P00352 501 aa13.3□□□□□ -0.28
RFTN1-208ENST00000470458 IFIT2P09913 472 aaKnown RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 ZBTB48P10074 688 aaPredicted RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 ANGEL1Q9UNK9 670 aaKnown RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 CSADQ9Y600 493 aa13.3□□□□□ -0.28
RFTN1-208ENST00000470458 RPAP1Q9BWH6 1393 aaPredicted RBP13.3□□□□□ -0.28
RFTN1-208ENST00000470458 THSD7BQ9C0I4 1608 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms