RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 SLC10A4Q96EP9 437 aa39.14■■■■□ 3.86
HMG20B-209ENST00000470356 FBXO3Q9UK99 471 aa39.14■■■■□ 3.86
HMG20B-209ENST00000470356 SREBF2Q12772 1141 aa39.13■■■■□ 3.85
HMG20B-209ENST00000470356 ARHGAP45Q92619 1136 aa39.13■■■■□ 3.85
HMG20B-209ENST00000470356 SLC5A1P13866 664 aa39.11■■■■□ 3.85
HMG20B-209ENST00000470356 LPIN2Q92539 896 aa39.11■■■■□ 3.85
HMG20B-209ENST00000470356 CIAO1O76071 339 aa39.1■■■■□ 3.85
HMG20B-209ENST00000470356 MRIQ9BWK5 157 aa39.1■■■■□ 3.85
HMG20B-209ENST00000470356 CLMNQ96JQ2 1002 aa39.09■■■■□ 3.85
HMG20B-209ENST00000470356 SUGT1Q9Y2Z0 365 aa39.09■■■■□ 3.85
HMG20B-209ENST00000470356 LRRFIP2Q9Y608 721 aaKnown RBP39.09■■■■□ 3.85
HMG20B-209ENST00000470356 USP2O75604 605 aaPredicted RBP39.08■■■■□ 3.85
HMG20B-209ENST00000470356 TBC1D8O95759 1140 aa39.08■■■■□ 3.85
HMG20B-209ENST00000470356 IREB2P48200 963 aaKnown RBP39.08■■■■□ 3.85
HMG20B-209ENST00000470356 TEKT1Q969V4 418 aa39.08■■■■□ 3.85
HMG20B-209ENST00000470356 INTS3Q68E01 1043 aaKnown RBP39.07■■■■□ 3.85
HMG20B-209ENST00000470356 SIL1Q9H173 461 aa39.07■■■■□ 3.85
HMG20B-209ENST00000470356 MYH13Q9UKX3 1938 aa39.06■■■■□ 3.84
HMG20B-209ENST00000470356 ZBTB48P10074 688 aaPredicted RBP39.06■■■■□ 3.84
HMG20B-209ENST00000470356 MEIS3Q99687 375 aa39.06■■■■□ 3.84
HMG20B-209ENST00000470356 CEP126Q9P2H0 1117 aa39.06■■■■□ 3.84
HMG20B-209ENST00000470356 INHBEP58166 350 aa39.05■■■■□ 3.84
HMG20B-209ENST00000470356 WNK4Q96J92 1243 aa39.05■■■■□ 3.84
HMG20B-209ENST00000470356 TEPSINQ96N21 525 aa39.05■■■■□ 3.84
HMG20B-209ENST00000470356 MANSC4A6NHS7 340 aaPredicted RBP39.04■■■■□ 3.84
HMG20B-209ENST00000470356 TCP10L2B9ZVM9 353 aa39.04■■■■□ 3.84
HMG20B-209ENST00000470356 TNNI2P48788 182 aa39.04■■■■□ 3.84
HMG20B-209ENST00000470356 NOM1Q5C9Z4 860 aaKnown RBP39.04■■■■□ 3.84
HMG20B-209ENST00000470356 CTU1Q7Z7A3 348 aaKnown RBP39.04■■■■□ 3.84
HMG20B-209ENST00000470356 ZDHHC15Q96MV8 337 aa39.04■■■■□ 3.84
HMG20B-209ENST00000470356 CFHR5Q9BXR6 569 aa39.04■■■■□ 3.84
HMG20B-209ENST00000470356 MAST3O60307 1309 aa39.04■■■■□ 3.84
HMG20B-209ENST00000470356 ANKRD13AQ8IZ07 590 aa39.03■■■■□ 3.84
HMG20B-209ENST00000470356 IL15P40933 162 aaPredicted RBP39.02■■■■□ 3.84
HMG20B-209ENST00000470356 ATP2B3Q16720 1220 aa39.02■■■■□ 3.84
HMG20B-209ENST00000470356 WDR66Q8TBY9 1149 aa39.02■■■■□ 3.84
HMG20B-209ENST00000470356 COPRSQ9NQ92 184 aa39.02■■■■□ 3.84
HMG20B-209ENST00000470356 ZBTB4Q9P1Z0 1013 aaPredicted RBP39.02■■■■□ 3.84
HMG20B-209ENST00000470356 LAMB1P07942 1786 aa39.01■■■■□ 3.84
HMG20B-209ENST00000470356 RGS19P49795 217 aa39.01■■■■□ 3.84
HMG20B-209ENST00000470356 ZNF296Q8WUU4 475 aaPredicted RBP39.01■■■■□ 3.84
HMG20B-209ENST00000470356 TMEM39BQ9GZU3 492 aa39.01■■■■□ 3.84
HMG20B-209ENST00000470356 IPO8O15397 1037 aaKnown RBP39■■■■□ 3.83
HMG20B-209ENST00000470356 ALDH1A1P00352 501 aa39■■■■□ 3.83
HMG20B-209ENST00000470356 CDAN1Q8IWY9 1227 aa39■■■■□ 3.83
HMG20B-209ENST00000470356 GPR25O00155 361 aa38.99■■■■□ 3.83
HMG20B-209ENST00000470356 GNAI3P08754 354 aa38.99■■■■□ 3.83
HMG20B-209ENST00000470356 HHIPL2Q6UWX4 724 aa38.99■■■■□ 3.83
HMG20B-209ENST00000470356 PA2G4Q9UQ80 394 aaKnown RBP38.99■■■■□ 3.83
HMG20B-209ENST00000470356 APOBEC3HQ6NTF7 200 aaKnown RBP38.98■■■■□ 3.83
HMG20B-209ENST00000470356 FKBP1CQ5VVH2 108 aa38.97■■■■□ 3.83
HMG20B-209ENST00000470356 IFNL1Q8IU54 200 aa38.97■■■■□ 3.83
HMG20B-209ENST00000470356 GNL3LQ9NVN8 582 aaKnown RBP38.97■■■■□ 3.83
HMG20B-209ENST00000470356 OTOFQ9HC10 1997 aa38.97■■■■□ 3.83
HMG20B-209ENST00000470356 TMOD2Q9NZR1 351 aa38.96■■■■□ 3.83
HMG20B-209ENST00000470356 CACNB3P54284 484 aa38.95■■■■□ 3.83
HMG20B-209ENST00000470356 R3HDMLQ9H3Y0 253 aa38.95■■■■□ 3.83
HMG20B-209ENST00000470356 TRIM27P14373 513 aa38.94■■■■□ 3.82
HMG20B-209ENST00000470356 GJA5P36382 358 aa38.94■■■■□ 3.82
HMG20B-209ENST00000470356 FAM83AQ86UY5 434 aa38.94■■■■□ 3.82
HMG20B-209ENST00000470356 BCAR3O75815 825 aa38.93■■■■□ 3.82
HMG20B-209ENST00000470356 MTX1Q13505 466 aa38.93■■■■□ 3.82
HMG20B-209ENST00000470356 PKN2Q16513 984 aaKnown RBP38.93■■■■□ 3.82
HMG20B-209ENST00000470356 ATF7IPQ6VMQ6 1270 aa38.93■■■■□ 3.82
HMG20B-209ENST00000470356 PPP1R3FQ6ZSY5 799 aaPredicted RBP38.92■■■■□ 3.82
HMG20B-209ENST00000470356 ELP3Q9H9T3 547 aa38.92■■■■□ 3.82
HMG20B-209ENST00000470356 IGF2BP3O00425 579 aaKnown RBP eCLIP38.91■■■■□ 3.82
HMG20B-209ENST00000470356 SEMA3EO15041 775 aa38.91■■■■□ 3.82
HMG20B-209ENST00000470356 ZBTB22O15209 634 aa38.91■■■■□ 3.82
HMG20B-209ENST00000470356 FKTNO75072 461 aa38.91■■■■□ 3.82
HMG20B-209ENST00000470356 MAP3K9P80192 1104 aa38.91■■■■□ 3.82
HMG20B-209ENST00000470356 SRGAP3O43295 1099 aa38.9■■■■□ 3.82
HMG20B-209ENST00000470356 PHKA1P46020 1223 aa38.9■■■■□ 3.82
HMG20B-209ENST00000470356 FRAT1Q92837 279 aaPredicted RBP38.9■■■■□ 3.82
HMG20B-209ENST00000470356 DENND2AQ9ULE3 1009 aa38.9■■■■□ 3.82
HMG20B-209ENST00000470356 MLLT1Q03111 559 aaPredicted RBP38.89■■■■□ 3.82
HMG20B-209ENST00000470356 MIER1Q8N108 512 aa38.89■■■■□ 3.82
HMG20B-209ENST00000470356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP38.89■■■■□ 3.82
HMG20B-209ENST00000470356 OPTNQ96CV9 577 aa38.89■■■■□ 3.82
HMG20B-209ENST00000470356 SALL1Q9NSC2 1324 aa38.89■■■■□ 3.82
HMG20B-209ENST00000470356 OTUD7BQ6GQQ9 843 aa38.88■■■■□ 3.81
HMG20B-209ENST00000470356 TESPA1A2RU30 521 aaPredicted RBP38.87■■■■□ 3.81
HMG20B-209ENST00000470356 PRDX5P30044 214 aa38.87■■■■□ 3.81
HMG20B-209ENST00000470356 VGLL4Q14135 290 aa38.87■■■■□ 3.81
HMG20B-209ENST00000470356 HOOK2Q96ED9 719 aa38.87■■■■□ 3.81
HMG20B-209ENST00000470356 TNNQ9UQP3 1299 aa38.87■■■■□ 3.81
HMG20B-209ENST00000470356 LDHBP07195 334 aaKnown RBP38.86■■■■□ 3.81
HMG20B-209ENST00000470356 ADORA1P30542 326 aa38.86■■■■□ 3.81
HMG20B-209ENST00000470356 CCDC102BQ68D86 513 aa38.86■■■■□ 3.81
HMG20B-209ENST00000470356 DAGLAQ9Y4D2 1042 aa38.86■■■■□ 3.81
HMG20B-209ENST00000470356 CSADQ9Y600 493 aa38.86■■■■□ 3.81
HMG20B-209ENST00000470356 TIMM10P62072 90 aa38.85■■■■□ 3.81
HMG20B-209ENST00000470356 DIXDC1Q155Q3 683 aa38.85■■■■□ 3.81
HMG20B-209ENST00000470356 GNAI2P04899 355 aa38.84■■■■□ 3.81
HMG20B-209ENST00000470356 CLUAP1Q96AJ1 413 aa38.84■■■■□ 3.81
HMG20B-209ENST00000470356 PTPN18Q99952 460 aa38.84■■■■□ 3.81
HMG20B-209ENST00000470356 AKAP2Q9Y2D5 859 aa38.84■■■■□ 3.81
HMG20B-209ENST00000470356 RPAP1Q9BWH6 1393 aaPredicted RBP38.83■■■■□ 3.81
HMG20B-209ENST00000470356 HNRNPUQ00839 825 aaKnown RBP eCLIP38.83■■■■□ 3.81
HMG20B-209ENST00000470356 MS4A4AQ96JQ5 239 aa38.83■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms