RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 NEUROD6Q96NK8 337 aa17.47■□□□□ 0.39
TOP3B-215ENST00000470338 SALL1Q9NSC2 1324 aa17.47■□□□□ 0.39
TOP3B-215ENST00000470338 PAPPA2Q9BXP8 1791 aa17.46■□□□□ 0.39
TOP3B-215ENST00000470338 HUNKP57058 714 aa17.46■□□□□ 0.39
TOP3B-215ENST00000470338 PRAMEF18Q5VWM3 479 aa17.46■□□□□ 0.39
TOP3B-215ENST00000470338 CYP4F22Q6NT55 531 aa17.46■□□□□ 0.39
TOP3B-215ENST00000470338 RPAP2Q8IXW5 612 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-215ENST00000470338 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
TOP3B-215ENST00000470338 MAST3O60307 1309 aa17.46■□□□□ 0.38
TOP3B-215ENST00000470338 PDS5AQ29RF7 1337 aaKnown RBP17.46■□□□□ 0.38
TOP3B-215ENST00000470338 FKBP1BP68106 108 aa17.45■□□□□ 0.38
TOP3B-215ENST00000470338 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-215ENST00000470338 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
TOP3B-215ENST00000470338 HHIPL2Q6UWX4 724 aa17.45■□□□□ 0.38
TOP3B-215ENST00000470338 TEKT1Q969V4 418 aa17.45■□□□□ 0.38
TOP3B-215ENST00000470338 DEFB129Q9H1M3 183 aa17.45■□□□□ 0.38
TOP3B-215ENST00000470338 MYH2Q9UKX2 1941 aa17.45■□□□□ 0.38
TOP3B-215ENST00000470338 CLRN2A0PK11 232 aa17.44■□□□□ 0.38
TOP3B-215ENST00000470338 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
TOP3B-215ENST00000470338 TNNI3KQ59H18 835 aa17.44■□□□□ 0.38
TOP3B-215ENST00000470338 PAXIP1Q6ZW49 1069 aaPredicted RBP17.44■□□□□ 0.38
TOP3B-215ENST00000470338 ZDHHC15Q96MV8 337 aa17.44■□□□□ 0.38
TOP3B-215ENST00000470338 TDRD3Q9H7E2 651 aaKnown RBP17.44■□□□□ 0.38
TOP3B-215ENST00000470338 ZNF70Q9UC06 446 aaPredicted RBP17.44■□□□□ 0.38
TOP3B-215ENST00000470338 PPP2R3BQ9Y5P8 575 aa17.44■□□□□ 0.38
TOP3B-215ENST00000470338 FPGT-TNNI3KV9GXZ4 949 aa17.44■□□□□ 0.38
TOP3B-215ENST00000470338 AKAP11Q9UKA4 1901 aa17.44■□□□□ 0.38
TOP3B-215ENST00000470338 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
TOP3B-215ENST00000470338 SIRT2Q8IXJ6 389 aa17.43■□□□□ 0.38
TOP3B-215ENST00000470338 LDHBP07195 334 aaKnown RBP17.42■□□□□ 0.38
TOP3B-215ENST00000470338 HSPA1AP0DMV8 641 aaKnown RBP17.42■□□□□ 0.38
TOP3B-215ENST00000470338 HSPA1BP0DMV9 641 aaKnown RBP17.42■□□□□ 0.38
TOP3B-215ENST00000470338 PRDX5P30044 214 aa17.42■□□□□ 0.38
TOP3B-215ENST00000470338 NF2P35240 595 aa17.42■□□□□ 0.38
TOP3B-215ENST00000470338 MAP2K2P36507 400 aa17.42■□□□□ 0.38
TOP3B-215ENST00000470338 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
TOP3B-215ENST00000470338 APOBEC3HQ6NTF7 200 aaKnown RBP17.42■□□□□ 0.38
TOP3B-215ENST00000470338 RGMBQ6NW40 437 aa17.42■□□□□ 0.38
TOP3B-215ENST00000470338 ZGPATQ8N5A5 531 aaKnown RBP17.42■□□□□ 0.38
TOP3B-215ENST00000470338 VEZTQ9HBM0 779 aa17.42■□□□□ 0.38
TOP3B-215ENST00000470338 HMMRO75330 724 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 TNFAIP1Q13829 316 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 RASA3Q14644 834 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 WBP1LQ9NX94 342 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 HMG20BQ9P0W2 317 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 EXOC6BQ9Y2D4 811 aa17.41■□□□□ 0.38
TOP3B-215ENST00000470338 FAM155AB1AL88 458 aaPredicted RBP17.4■□□□□ 0.38
TOP3B-215ENST00000470338 AOC2O75106 756 aa17.4■□□□□ 0.38
TOP3B-215ENST00000470338 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
TOP3B-215ENST00000470338 GRM1Q13255 1194 aa17.4■□□□□ 0.38
TOP3B-215ENST00000470338 MOB2Q70IA6 237 aa17.4■□□□□ 0.38
TOP3B-215ENST00000470338 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
TOP3B-215ENST00000470338 CCDC102AQ96A19 550 aa17.4■□□□□ 0.38
TOP3B-215ENST00000470338 EAF2Q96CJ1 260 aaPredicted RBP17.4■□□□□ 0.38
TOP3B-215ENST00000470338 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
TOP3B-215ENST00000470338 MCAMP43121 646 aa17.39■□□□□ 0.37
TOP3B-215ENST00000470338 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-215ENST00000470338 MAP2K1Q02750 393 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-215ENST00000470338 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
TOP3B-215ENST00000470338 SUPT20HL1Q3ZLR7 823 aa17.39■□□□□ 0.37
TOP3B-215ENST00000470338 FKBP1CQ5VVH2 108 aa17.39■□□□□ 0.37
TOP3B-215ENST00000470338 SPTY2D1Q68D10 685 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-215ENST00000470338 ZNF512BQ96KM6 892 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-215ENST00000470338 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
TOP3B-215ENST00000470338 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.37
TOP3B-215ENST00000470338 SSC5DA1L4H1 1573 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 TNNI2P48788 182 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
TOP3B-215ENST00000470338 NOGQ13253 232 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 CCDC158Q5M9N0 1113 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 NBPF12Q5TAG4 269 aaPredicted RBP17.38■□□□□ 0.37
TOP3B-215ENST00000470338 PI16Q6UXB8 463 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 TEPSINQ96N21 525 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 ABCF2Q9UG63 623 aa17.38■□□□□ 0.37
TOP3B-215ENST00000470338 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
TOP3B-215ENST00000470338 TCP10L2B9ZVM9 353 aa17.37■□□□□ 0.37
TOP3B-215ENST00000470338 SLC10A3P09131 477 aa17.37■□□□□ 0.37
TOP3B-215ENST00000470338 TTLL12Q14166 644 aaPredicted RBP17.37■□□□□ 0.37
TOP3B-215ENST00000470338 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
TOP3B-215ENST00000470338 TTC39AQ5SRH9 613 aa17.37■□□□□ 0.37
TOP3B-215ENST00000470338 LDLRAD1Q5T700 205 aa17.37■□□□□ 0.37
TOP3B-215ENST00000470338 ARMC9Q7Z3E5 817 aa17.37■□□□□ 0.37
TOP3B-215ENST00000470338 FAM83AQ86UY5 434 aa17.37■□□□□ 0.37
TOP3B-215ENST00000470338 FAM163AQ96GL9 167 aaPredicted RBP17.37■□□□□ 0.37
TOP3B-215ENST00000470338 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
TOP3B-215ENST00000470338 CACNB3P54284 484 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 CDC42EP5Q6NZY7 148 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 ZIC5Q96T25 663 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 TMEM39BQ9GZU3 492 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 TLR7Q9NYK1 1049 aaKnown RBP17.36■□□□□ 0.37
TOP3B-215ENST00000470338 TMOD2Q9NZR1 351 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 GAKO14976 1311 aa17.36■□□□□ 0.37
TOP3B-215ENST00000470338 FOXN1O15353 648 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms