RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 SHANK3Q9BYB0 1731 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 E7EWF7 191 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 TRIM29Q14134 588 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 IQCEQ6IPM2 695 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 CCDC47Q96A33 483 aaKnown RBP8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 GOLGA6L7A0A1B0GV03 622 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 PFKFB2O60825 505 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 RIC1Q4ADV7 1423 aa8.13□□□□□ -1.11
GAPVD1-215ENST00000470056 MCAMP43121 646 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 GSTO1P78417 241 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 STK3Q13188 491 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 ME3Q16798 604 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 TMEM87BQ96K49 555 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 ZMYM6O95789 1325 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 DOT1LQ8TEK3 1739 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 ZNF772Q68DY9 489 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 TMTC2Q8N394 836 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 ZNF532Q9HCE3 1301 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 PHKA1P46020 1223 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 UBE2HP62256 183 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 ERFEQ4G0M1 354 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 NRAPQ86VF7 1730 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 CEP89Q96ST8 783 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 TMC4Q7Z404 712 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 SEC62Q99442 399 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 TPCN1Q9ULQ1 816 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 CCDC196A0A1B0GTZ2 297 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 PRC1O43663 620 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 CPA1P15085 419 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 MTA3Q9BTC8 594 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 GBP3Q9H0R5 595 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 FGFR2P21802 821 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 TERF1P54274 439 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 OSBP2Q969R2 916 aa8.12□□□□□ -1.11
GAPVD1-215ENST00000470056 CCDC69A6NI79 296 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 H0YHG0 523 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 M0R2C6 588 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 ZNF804AQ7Z570 1209 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 MAGEB6Q8N7X4 407 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 ABCF2Q9UG63 623 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 LDHCP07864 332 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 ALX1Q15699 326 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 CREBRFQ8IUR6 639 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 SLF2Q8IX21 1173 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 VGLL2Q8N8G2 317 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 RBM17Q96I25 401 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 LMBRD1Q9NUN5 540 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 FIBPO43427 364 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 NAA16Q6N069 864 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 MFSD6Q6ZSS7 791 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 SEC31BQ9NQW1 1179 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 SYNE4Q8N205 404 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 TMEM87AQ8NBN3 555 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 ANKIB1Q9P2G1 1089 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 RGS22Q8NE09 1264 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 KRT27Q7Z3Y8 459 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 UQCRHLA0A096LP55 91 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 UQCRHP07919 91 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 PCP11498 1178 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 TRIM22Q8IYM9 498 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 NECAB1Q8N987 351 aa8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 PDS5AQ29RF7 1337 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-215ENST00000470056 MBD4O95243 580 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 CYP7A1P22680 504 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 CCDC183Q5T5S1 534 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 BICD2Q8TD16 824 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 SPATA32Q96LK8 384 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 UBAC1Q9BSL1 405 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 HIBADHP31937 336 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 HSPA1LP34931 641 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 AKAP17AQ02040 695 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 RASGRF1Q13972 1273 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 SAFBQ15424 915 aaKnown RBP eCLIP8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 CRNKL1Q9BZJ0 848 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 SLC4A4Q9Y6R1 1079 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 MAGEB6P1A0A0J9YX57 407 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 XBP1P17861 261 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 PPP2R5BQ15173 497 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 ATRNO75882 1429 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 PNPLA7Q6ZV29 1317 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 FGAP02671 866 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 MCM3P25205 808 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 ZNF445P59923 1031 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 TPD52L1Q16890 204 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 WNK3Q9BYP7 1800 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 CTR9Q6PD62 1173 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 JMYQ8N9B5 988 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 ZNF287Q9HBT7 754 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 PIH1D3Q9NQM4 214 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 CGNQ9P2M7 1197 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 CCDC178Q5BJE1 867 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms