RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 SMC2O95347 1197 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 FGAP02671 866 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
SMC4-210ENST00000469762 LMOD2Q6P5Q4 547 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 REXO1L1PQ8IX06 675 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 FMNL2Q96PY5 1086 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 ZRANB2O95218 330 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMC4-210ENST00000469762 FANCCQ00597 558 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.52e-10■■■□□ 18.8
SMC4-210ENST00000469762 MYH7P12883 1935 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 AKAP11Q9UKA4 1901 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 SLC3A2P08195 630 aaKnown RBP11.94□□□□□ -0.5
SMC4-210ENST00000469762 BMP6P22004 513 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 CMA1P23946 247 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 ADORA1P30542 326 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 PLA2G4AP47712 749 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 STK38Q15208 465 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 SHC4Q6S5L8 630 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 C8orf76Q96K31 380 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
SMC4-210ENST00000469762 UBR2Q8IWV8 1755 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
SMC4-210ENST00000469762 PTPAQ15257 358 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 ANO1Q5XXA6 986 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 KLF18A0A0U1RQI7 1052 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 TICAM2Q86XR7 235 aa11.94□□□□□ -0.5
SMC4-210ENST00000469762 ORC3Q9UBD5 711 aaPredicted RBP11.94□□□□□ -0.5
SMC4-210ENST00000469762 KIF2AO00139 706 aaPredicted RBP11.93□□□□□ -0.5
SMC4-210ENST00000469762 EYA2O00167 538 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 PRC1O43663 620 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 MARCKSP29966 332 aaPredicted RBP11.93□□□□□ -0.5
SMC4-210ENST00000469762 CDC27P30260 824 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 IKBKBO14920 756 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 SFPQP23246 707 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMC4-210ENST00000469762 IL15P40933 162 aaPredicted RBP11.93□□□□□ -0.5
SMC4-210ENST00000469762 ETF1P62495 437 aaKnown RBP11.93□□□□□ -0.5
SMC4-210ENST00000469762 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 RAPGEF4Q8WZA2 1011 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 MAP3K14Q99558 947 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 SENP2Q9HC62 589 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 XIRP1Q702N8 1843 aaKnown RBP11.93□□□□□ -0.5
SMC4-210ENST00000469762 UBE2Q2LH0YL09 131 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 SLC39A14Q15043 492 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 KRT28Q7Z3Y7 464 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 IFNL2Q8IZJ0 200 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 STRCP1A6NGW2 1772 aa11.93□□□□□ -0.5
SMC4-210ENST00000469762 NLRP2Q9NX02 1062 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.57e-7■■■■□ 21.2
SMC4-210ENST00000469762 FAM237AA0A1B0GTK4 181 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 GOLGA8BA8MQT2 603 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 PNMA6AP0CW24 399 aaPredicted RBP11.92□□□□□ -0.5
SMC4-210ENST00000469762 PDE4BQ07343 736 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 PARP3Q9Y6F1 533 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 ZBTB22O15209 634 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 PNOCQ13519 176 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
SMC4-210ENST00000469762 METTL16Q86W50 562 aaKnown RBP11.92□□□□□ -0.5
SMC4-210ENST00000469762 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.92□□□□□ -0.56e-8■■■■□ 23.9
SMC4-210ENST00000469762 DCAF5Q96JK2 942 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 EPC1Q9H2F5 836 aa11.92□□□□□ -0.5
SMC4-210ENST00000469762 PARP4Q9UKK3 1724 aaKnown RBP11.92□□□□□ -0.5
SMC4-210ENST00000469762 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 UBXN6Q9BZV1 441 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 PHLPP2Q6ZVD8 1323 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 FKBP4Q02790 459 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMC4-210ENST00000469762 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 CLIC6Q96NY7 704 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 CPDO75976 1380 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 FOXN1O15353 648 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 TADA3O75528 432 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 CIAO1O76071 339 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
SMC4-210ENST00000469762 CYB5R4Q7L1T6 521 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 MED15Q96RN5 788 aa11.91□□□□□ -0.5
SMC4-210ENST00000469762 KCPQ6ZWJ8 1503 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 TTC5Q8N0Z6 440 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 A1BGP04217 495 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 MDM2Q00987 491 aaPredicted RBP11.9□□□□□ -0.5
SMC4-210ENST00000469762 ANKLE2Q86XL3 938 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 DDX17Q92841 729 aaKnown RBP11.9□□□□□ -0.5
SMC4-210ENST00000469762 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
SMC4-210ENST00000469762 CWC25Q9NXE8 425 aaPredicted RBP11.9□□□□□ -0.5
SMC4-210ENST00000469762 SASH3O75995 380 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 ZAP70P43403 619 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 TBX2Q13207 712 aaPredicted RBP11.9□□□□□ -0.5
SMC4-210ENST00000469762 LONRF3Q496Y0 759 aa11.9□□□□□ -0.5
SMC4-210ENST00000469762 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 RXRAP19793 462 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 NTRK3Q16288 839 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 VPS37DQ86XT2 251 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 TBC1D10CQ8IV04 446 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 XAGE2Q96GT9 111 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms