RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 PAPPA2Q9BXP8 1791 aa14.4□□□□□ -0.1
MCF2L-222ENST00000469558 MCAMP43121 646 aa14.4□□□□□ -0.1
MCF2L-222ENST00000469558 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
MCF2L-222ENST00000469558 WDR66Q8TBY9 1149 aa14.4□□□□□ -0.1
MCF2L-222ENST00000469558 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.1
MCF2L-222ENST00000469558 HMG20BQ9P0W2 317 aa14.4□□□□□ -0.1
MCF2L-222ENST00000469558 SUGT1Q9Y2Z0 365 aa14.4□□□□□ -0.1
MCF2L-222ENST00000469558 CLRN2A0PK11 232 aa14.39□□□□□ -0.11
MCF2L-222ENST00000469558 FRAT2O75474 233 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-222ENST00000469558 VEGFBP49765 207 aa14.39□□□□□ -0.11
MCF2L-222ENST00000469558 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
MCF2L-222ENST00000469558 APOBEC3HQ6NTF7 200 aaKnown RBP14.39□□□□□ -0.11
MCF2L-222ENST00000469558 MRIQ9BWK5 157 aa14.39□□□□□ -0.11
MCF2L-222ENST00000469558 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
MCF2L-222ENST00000469558 DENND2AQ9ULE3 1009 aa14.39□□□□□ -0.11
MCF2L-222ENST00000469558 OS9Q13438 667 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-222ENST00000469558 DIXDC1Q155Q3 683 aa14.38□□□□□ -0.11
MCF2L-222ENST00000469558 CDAN1Q8IWY9 1227 aa14.38□□□□□ -0.11
MCF2L-222ENST00000469558 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
MCF2L-222ENST00000469558 TDRD3Q9H7E2 651 aaKnown RBP14.38□□□□□ -0.11
MCF2L-222ENST00000469558 GNL3LQ9NVN8 582 aaKnown RBP14.38□□□□□ -0.11
MCF2L-222ENST00000469558 ZNF70Q9UC06 446 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-222ENST00000469558 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
MCF2L-222ENST00000469558 PCDHB15Q9Y5E8 787 aa14.38□□□□□ -0.11
MCF2L-222ENST00000469558 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
MCF2L-222ENST00000469558 MAST2Q6P0Q8 1798 aa14.37□□□□□ -0.11
MCF2L-222ENST00000469558 RFX7Q2KHR2 1363 aa14.37□□□□□ -0.11
MCF2L-222ENST00000469558 DEFB115Q30KQ5 88 aa14.37□□□□□ -0.11
MCF2L-222ENST00000469558 APOBEC3FQ8IUX4 373 aaKnown RBP14.37□□□□□ -0.11
MCF2L-222ENST00000469558 RHPN1Q8TCX5 695 aa14.37□□□□□ -0.11
MCF2L-222ENST00000469558 CRBNQ96SW2 442 aa14.37□□□□□ -0.11
MCF2L-222ENST00000469558 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-222ENST00000469558 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-222ENST00000469558 DAGLAQ9Y4D2 1042 aa14.37□□□□□ -0.11
MCF2L-222ENST00000469558 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 MOB2Q70IA6 237 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 SPATA5Q8NB90 893 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 TEKT1Q969V4 418 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 HHIPL1Q96JK4 782 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 ZNF512BQ96KM6 892 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-222ENST00000469558 TEPSINQ96N21 525 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 DEFB129Q9H1M3 183 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
MCF2L-222ENST00000469558 IL1RAPL2Q9NP60 686 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 MYH2Q9UKX2 1941 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 GAKO14976 1311 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 DOCK2Q92608 1830 aa14.36□□□□□ -0.11
MCF2L-222ENST00000469558 OTOFQ9HC10 1997 aa14.35□□□□□ -0.11
MCF2L-222ENST00000469558 HMMRO75330 724 aa14.35□□□□□ -0.11
MCF2L-222ENST00000469558 LDHBP07195 334 aaKnown RBP14.35□□□□□ -0.11
MCF2L-222ENST00000469558 RBM5P52756 815 aaKnown RBP eCLIP14.35□□□□□ -0.11
MCF2L-222ENST00000469558 CACNB3P54284 484 aa14.35□□□□□ -0.11
MCF2L-222ENST00000469558 TBC1D9Q6ZT07 1266 aa14.35□□□□□ -0.11
MCF2L-222ENST00000469558 ERC1Q8IUD2 1116 aa14.35□□□□□ -0.11
MCF2L-222ENST00000469558 MAST3O60307 1309 aa14.35□□□□□ -0.11
MCF2L-222ENST00000469558 WDR33Q9C0J8 1336 aaKnown RBP14.35□□□□□ -0.11
MCF2L-222ENST00000469558 FAM155AB1AL88 458 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-222ENST00000469558 CYP2E1P05181 493 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-222ENST00000469558 HUNKP57058 714 aa14.34□□□□□ -0.11
MCF2L-222ENST00000469558 RASA3Q14644 834 aa14.34□□□□□ -0.11
MCF2L-222ENST00000469558 CAPNS2Q96L46 248 aa14.34□□□□□ -0.11
MCF2L-222ENST00000469558 VEZTQ9HBM0 779 aa14.34□□□□□ -0.11
MCF2L-222ENST00000469558 SNRKQ9NRH2 765 aa14.34□□□□□ -0.11
MCF2L-222ENST00000469558 FZD1Q9UP38 647 aa14.34□□□□□ -0.11
MCF2L-222ENST00000469558 PPP2R3BQ9Y5P8 575 aa14.34□□□□□ -0.11
MCF2L-222ENST00000469558 APBB1O00213 710 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 MECOMQ03112 1051 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 HSP90AB4PQ58FF6 505 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 GORABQ5T7V8 394 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 NBPF12Q5TAG4 269 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-222ENST00000469558 AACSQ86V21 672 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 KIF1BPQ96EK5 621 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 ZIC5Q96T25 663 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 TMEM39BQ9GZU3 492 aa14.33□□□□□ -0.12
MCF2L-222ENST00000469558 TCP10L2B9ZVM9 353 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 MYO1BO43795 1136 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 AOC2O75106 756 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 RAB11FIP3O75154 756 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 ZAP70P43403 619 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 FKBP1BP68106 108 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 TTC39AQ5SRH9 613 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 C2orf69Q8N8R5 385 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 NSUN4Q96CB9 384 aaKnown RBP14.32□□□□□ -0.12
MCF2L-222ENST00000469558 FAM163AQ96GL9 167 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-222ENST00000469558 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
MCF2L-222ENST00000469558 ABCF2Q9UG63 623 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 NDUFB9Q9Y6M9 179 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 LAMB1P07942 1786 aa14.32□□□□□ -0.12
MCF2L-222ENST00000469558 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-222ENST00000469558 NFIAQ12857 509 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 MAP3K11Q16584 847 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 CCDC158Q5M9N0 1113 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 LDLRAD1Q5T700 205 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 FKBP1CQ5VVH2 108 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 RGMBQ6NW40 437 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms