RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 CHGBP05060 677 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 LDHBP07195 334 aaKnown RBP15.29■□□□□ 0.04
TRAF4-208ENST00000469529 GNAT2P19087 354 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 MCCP23508 829 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 PPP4CP60510 307 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 GSTO1P78417 241 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 PTH1RQ03431 593 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 TTLL5Q6EMB2 1281 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 ZNF384Q8TF68 577 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 STRBPQ96SI9 672 aaKnown RBP15.29■□□□□ 0.04
TRAF4-208ENST00000469529 KIF2CQ99661 725 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
TRAF4-208ENST00000469529 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-208ENST00000469529 G3V3G9 751 aa15.28■□□□□ 0.04
TRAF4-208ENST00000469529 CYP7A1P22680 504 aa15.28■□□□□ 0.04
TRAF4-208ENST00000469529 MMP14P50281 582 aa15.28■□□□□ 0.04
TRAF4-208ENST00000469529 HDLBPQ00341 1268 aaKnown RBP15.28■□□□□ 0.04
TRAF4-208ENST00000469529 MECOMQ03112 1051 aa15.28■□□□□ 0.04
TRAF4-208ENST00000469529 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-208ENST00000469529 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
TRAF4-208ENST00000469529 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-208ENST00000469529 SLF2Q8IX21 1173 aa15.28■□□□□ 0.04
TRAF4-208ENST00000469529 USP17L3A6NCW0 530 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 USP17L4A6NCW7 530 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 M0R2C6 588 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 GPAA1O43292 621 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 PPIP5K2O43314 1243 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 HSPD1P10809 573 aaKnown RBP15.27■□□□□ 0.04
TRAF4-208ENST00000469529 PRDX5P30044 214 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 GTF2IP78347 998 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 DOK7Q18PE1 504 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 SLFNL1Q499Z3 407 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 MFSD14BQ5SR56 506 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 GIMAP6Q6P9H5 292 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 USP17L1Q7RTZ2 530 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 RIOK1Q9BRS2 568 aaKnown RBP15.27■□□□□ 0.04
TRAF4-208ENST00000469529 TAOK3Q9H2K8 898 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 RNF181Q9P0P0 153 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-208ENST00000469529 CTNNA3Q9UI47 895 aa15.27■□□□□ 0.04
TRAF4-208ENST00000469529 ZMYM6O95789 1325 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 PATL2C9JE40 543 aaKnown RBP15.26■□□□□ 0.03
TRAF4-208ENST00000469529 ECE2O60344 883 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 IARSP41252 1262 aaKnown RBP15.26■□□□□ 0.03
TRAF4-208ENST00000469529 AOC3Q16853 763 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 DACT2Q5SW24 774 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 RNF20Q5VTR2 975 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 HHIPL2Q6UWX4 724 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 TM6SF1Q9BZW5 370 aa15.26■□□□□ 0.03
TRAF4-208ENST00000469529 RBM8AQ9Y5S9 174 aaKnown RBP15.26■□□□□ 0.03
TRAF4-208ENST00000469529 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
TRAF4-208ENST00000469529 NFKBIEO00221 500 aa15.25■□□□□ 0.03
TRAF4-208ENST00000469529 FOXP2O15409 715 aa15.25■□□□□ 0.03
TRAF4-208ENST00000469529 RASSF7Q02833 373 aa15.25■□□□□ 0.03
TRAF4-208ENST00000469529 RABEP1Q15276 862 aa15.25■□□□□ 0.03
TRAF4-208ENST00000469529 ZNRF3Q9ULT6 936 aa15.25■□□□□ 0.03
TRAF4-208ENST00000469529 GAKO14976 1311 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 MYO3BQ8WXR4 1341 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 MAGEB6P1A0A0J9YX57 407 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 BAG3O95817 575 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 VIL1P09327 827 aaKnown RBP15.24■□□□□ 0.03
TRAF4-208ENST00000469529 ZKSCAN1P17029 563 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-208ENST00000469529 CCDC129Q6ZRS4 1044 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 ADGRA1Q86SQ6 560 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 DZIP1Q86YF9 867 aaKnown RBP15.24■□□□□ 0.03
TRAF4-208ENST00000469529 LARGE2Q8N3Y3 721 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
TRAF4-208ENST00000469529 SBF1O95248 1867 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 YDJCA8MPS7 323 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 FGAP02671 866 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 LMNB1P20700 586 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 ANP32AP39687 249 aaKnown RBP15.23■□□□□ 0.03
TRAF4-208ENST00000469529 GRIK5Q16478 980 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 VPS53Q5VIR6 699 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 CREB3L3Q68CJ9 461 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 SNX21Q969T3 373 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 ZNF277Q9NRM2 450 aaPredicted RBP15.23■□□□□ 0.03
TRAF4-208ENST00000469529 SNX14Q9Y5W7 946 aa15.23■□□□□ 0.03
TRAF4-208ENST00000469529 DOCK2Q92608 1830 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 GSG1L2A8MUP6 293 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 KIF3CO14782 793 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 SLC27A2O14975 620 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 MBD4O95243 580 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 PLCG2P16885 1265 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 KRT32Q14532 448 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 NIM1KQ8IY84 436 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 GMLQ99445 158 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 KCNQ5Q9NR82 932 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 ATP8A2Q9NTI2 1148 aa15.22■□□□□ 0.03
TRAF4-208ENST00000469529 AK9Q5TCS8 1911 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 MROH7-TTC4A0A0A0MT08 1334 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 PSMA5P28066 241 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 IFNL3Q8IZI9 196 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms