RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 TXNRD3Q86VQ6 643 aa10.27□□□□□ -0.77
GAPVD1-213ENST00000469498 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
GAPVD1-213ENST00000469498 GPATCH3Q96I76 525 aa10.27□□□□□ -0.77
GAPVD1-213ENST00000469498 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
GAPVD1-213ENST00000469498 IRS2Q9Y4H2 1338 aa10.27□□□□□ -0.77
GAPVD1-213ENST00000469498 YBX3P16989 372 aaKnown RBP eCLIP10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 PHKA1P46020 1223 aa10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 PDE1AP54750 535 aa10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 RASSF7Q02833 373 aa10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 MFSD10Q14728 455 aa10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 TTC39AQ5SRH9 613 aa10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 RTKN2Q8IZC4 609 aa10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 IQSEC3Q9UPP2 1182 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-213ENST00000469498 NFKBIEO00221 500 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 BCAMP50895 628 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 AOC3Q16853 763 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 ZNF804AQ7Z570 1209 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 VPS37DQ86XT2 251 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 SUPT20HQ8NEM7 779 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 EYA3Q99504 573 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 TAOK3Q9H2K8 898 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 GPHNQ9NQX3 736 aaPredicted RBP10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 ZNF277Q9NRM2 450 aaPredicted RBP10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 ECHDC1Q9NTX5 307 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 WDR70Q9NW82 654 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 FOCADQ5VW36 1801 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 AOX1Q06278 1338 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 TTC41PQ6P2S7 1318 aa10.25□□□□□ -0.77
GAPVD1-213ENST00000469498 PPIP5K2O43314 1243 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 SCARF1Q14162 830 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 WASHC4Q2M389 1173 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 CAVIN4Q5BKX8 364 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 CCDC158Q5M9N0 1113 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 PI16Q6UXB8 463 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 PI4K2BQ8TCG2 481 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 FAM84BQ96KN1 310 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 PSMD1Q99460 953 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 DNAJC2Q99543 621 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 RTFDC1Q9BY42 306 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 STAP2Q9UGK3 403 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 NDUFB9Q9Y6M9 179 aa10.24□□□□□ -0.77
GAPVD1-213ENST00000469498 KIF3CO14782 793 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 ERC2O15083 957 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 MAP4K4O95819 1239 aaPredicted RBP10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 UQCRFS1P1P0C7P4 283 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 HIBADHP31937 336 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 MCAMP43121 646 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 LSM11P83369 360 aaKnown RBP eCLIP10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 RASGRF1Q13972 1273 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 TTC22Q5TAA0 569 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 ARHGAP27Q6ZUM4 889 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 C15orf52Q6ZUT6 534 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 ZC3H12CQ9C0D7 883 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 BOLA2Q9H3K6 86 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 DBNDD1Q9H9R9 158 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 NAV1Q8NEY1 1877 aa10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 BAZ2AQ9UIF9 1905 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-213ENST00000469498 ECE2O60344 883 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 FRAT2O75474 233 aaPredicted RBP10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 GLRX3O76003 335 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 GSPT1P15170 499 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 ATP5JP18859 108 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 IARSP41252 1262 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 KIAA2012Q0VF49 1180 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 CHAF1AQ13111 956 aaPredicted RBP10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 GPR162Q16538 588 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 FBXO33Q7Z6M2 555 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 LARGE2Q8N3Y3 721 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 FBXW7Q969H0 707 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 EDC3Q96F86 508 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 OSBPL3Q9H4L5 887 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 GNL3LQ9NVN8 582 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 JAG2Q9Y219 1238 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 LTBP3Q9NS15 1303 aa10.22□□□□□ -0.77
GAPVD1-213ENST00000469498 LAMB1P07942 1786 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 MYH1P12882 1939 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 MYH8P13535 1937 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 ZAP70P43403 619 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 PRELPP51888 382 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 GPR153Q6NV75 609 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 SPATA5Q8NB90 893 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 COA1Q9GZY4 146 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 CD209Q9NNX6 404 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 HMG20BQ9P0W2 317 aa10.21□□□□□ -0.77
GAPVD1-213ENST00000469498 LAMA4Q16363 1823 aa10.21□□□□□ -0.78
GAPVD1-213ENST00000469498 C2orf72A6NCS6 295 aa10.2□□□□□ -0.78
GAPVD1-213ENST00000469498 TRIM6-TRIM34B2RNG4 842 aa10.2□□□□□ -0.78
GAPVD1-213ENST00000469498 GOLIM4O00461 696 aa10.2□□□□□ -0.78
GAPVD1-213ENST00000469498 NIM1KQ8IY84 436 aa10.2□□□□□ -0.78
GAPVD1-213ENST00000469498 TDRD7Q8NHU6 1098 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-213ENST00000469498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.2□□□□□ -0.78
GAPVD1-213ENST00000469498 RILPL2Q969X0 211 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms