RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ELP3Q9H9T3 547 aa8.34□□□□□ -1.07
VPS8-219ENST00000469479 JUNBP17275 347 aaPredicted RBP8.33□□□□□ -1.08
VPS8-219ENST00000469479 C19orf57Q0VDD7 668 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 CFAP70Q5T0N1 1121 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 NUTM2GQ5VZR2 741 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 FBXL6Q8N531 539 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 ABTB2Q8N961 1025 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 UACAQ9BZF9 1416 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 STIM2Q9P246 746 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 KDM5BQ9UGL1 1544 aa8.33□□□□□ -1.08
VPS8-219ENST00000469479 RPLP1P05386 114 aaKnown RBP8.32□□□□□ -1.08
VPS8-219ENST00000469479 SGO2Q562F6 1265 aa8.32□□□□□ -1.08
VPS8-219ENST00000469479 TP53INP2Q8IXH6 220 aa8.32□□□□□ -1.08
VPS8-219ENST00000469479 C12orf50Q8NA57 414 aaPredicted RBP8.32□□□□□ -1.08
VPS8-219ENST00000469479 SLC7A3Q8WY07 619 aa8.32□□□□□ -1.08
VPS8-219ENST00000469479 CYP4F12Q9HCS2 524 aa8.32□□□□□ -1.08
VPS8-219ENST00000469479 SALL4Q9UJQ4 1053 aa8.32□□□□□ -1.08
VPS8-219ENST00000469479 CUL7Q14999 1698 aa8.32□□□□□ -1.08
VPS8-219ENST00000469479 MAGI3Q5TCQ9 1506 aa8.31□□□□□ -1.08
VPS8-219ENST00000469479 ITGB5P18084 799 aa8.31□□□□□ -1.08
VPS8-219ENST00000469479 CDCA8Q53HL2 280 aa8.31□□□□□ -1.08
VPS8-219ENST00000469479 PAOXQ6QHF9 649 aa8.31□□□□□ -1.08
VPS8-219ENST00000469479 SMG8Q8ND04 991 aaKnown RBP8.31□□□□□ -1.08
VPS8-219ENST00000469479 SUGCTQ9HAC7 445 aa8.31□□□□□ -1.08
VPS8-219ENST00000469479 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
VPS8-219ENST00000469479 FAM95CA0A1B0GW59 222 aa8.3□□□□□ -1.08
VPS8-219ENST00000469479 PDE2AO00408 941 aaPredicted RBP8.3□□□□□ -1.08
VPS8-219ENST00000469479 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
VPS8-219ENST00000469479 TMPRSS13Q9BYE2 586 aa8.3□□□□□ -1.08
VPS8-219ENST00000469479 DZANK1Q9NVP4 752 aa8.3□□□□□ -1.08
VPS8-219ENST00000469479 NFKBIEO00221 500 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 CYP26A1O43174 497 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 NAA30Q147X3 362 aaPredicted RBP8.29□□□□□ -1.08
VPS8-219ENST00000469479 ZNF438Q7Z4V0 828 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 AGBL5Q8NDL9 886 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
VPS8-219ENST00000469479 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
VPS8-219ENST00000469479 KANSL3Q9P2N6 904 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 SOX13Q9UN79 622 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 DISP3Q9P2K9 1392 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 PTPRMP28827 1452 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 WDR7Q9Y4E6 1490 aa8.29□□□□□ -1.08
VPS8-219ENST00000469479 PCF11O94913 1555 aaKnown RBP8.29□□□□□ -1.08
VPS8-219ENST00000469479 PHLDB1Q86UU1 1377 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 TIAF1O95411 115 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 USP11P51784 963 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 NFKBIBQ15653 356 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 PMEPA1Q969W9 287 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 CNTN3Q9P232 1028 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 KIF27Q86VH2 1401 aa8.28□□□□□ -1.08
VPS8-219ENST00000469479 ZBTB39O15060 712 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
VPS8-219ENST00000469479 CES1P23141 567 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 XKR5Q6UX68 686 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 CAPN12Q6ZSI9 719 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 NUDT16Q96DE0 195 aaKnown RBP8.27□□□□□ -1.09
VPS8-219ENST00000469479 MKNK1Q9BUB5 465 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 YIPF2Q9BWQ6 316 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 CD109Q6YHK3 1445 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 IQGAP2Q13576 1575 aa8.27□□□□□ -1.09
VPS8-219ENST00000469479 ARAP3Q8WWN8 1544 aa8.26□□□□□ -1.09
VPS8-219ENST00000469479 DBX1A6NMT0 343 aa8.26□□□□□ -1.09
VPS8-219ENST00000469479 IKBKEQ14164 716 aa8.26□□□□□ -1.09
VPS8-219ENST00000469479 NFXL1Q6ZNB6 911 aa8.26□□□□□ -1.09
VPS8-219ENST00000469479 TMEM102Q8N9M5 508 aaPredicted RBP8.26□□□□□ -1.09
VPS8-219ENST00000469479 BSNDQ8WZ55 320 aa8.26□□□□□ -1.09
VPS8-219ENST00000469479 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
VPS8-219ENST00000469479 CFAP43Q8NDM7 1665 aa8.25□□□□□ -1.09
VPS8-219ENST00000469479 SOX1O00570 391 aaPredicted RBP8.25□□□□□ -1.09
VPS8-219ENST00000469479 PCSK2P16519 638 aa8.25□□□□□ -1.09
VPS8-219ENST00000469479 EXOSC6Q5RKV6 272 aaKnown RBP8.25□□□□□ -1.09
VPS8-219ENST00000469479 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
VPS8-219ENST00000469479 SOX17Q9H6I2 414 aaPredicted RBP8.25□□□□□ -1.09
VPS8-219ENST00000469479 ZMIZ1Q9ULJ6 1067 aa8.25□□□□□ -1.09
VPS8-219ENST00000469479 ZCCHC11Q5TAX3 1644 aaKnown RBP8.25□□□□□ -1.09
VPS8-219ENST00000469479 LOC100289279A0A1B0GTE1 492 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 SPOCD1Q6ZMY3 1216 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 ZAR1Q86SH2 424 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 FLCNQ8NFG4 579 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 FBLIM1Q8WUP2 373 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 TBC1D32Q96NH3 1257 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 ADAMTSL3P82987 1691 aa8.24□□□□□ -1.09
VPS8-219ENST00000469479 KIF21BO75037 1637 aa8.23□□□□□ -1.09
VPS8-219ENST00000469479 ACPPP15309 386 aa8.23□□□□□ -1.09
VPS8-219ENST00000469479 ZNF648Q5T619 568 aaPredicted RBP8.23□□□□□ -1.09
VPS8-219ENST00000469479 DUSP27Q5VZP5 1158 aa8.23□□□□□ -1.09
VPS8-219ENST00000469479 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
VPS8-219ENST00000469479 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
VPS8-219ENST00000469479 EZH1Q92800 747 aaPredicted RBP8.23□□□□□ -1.09
VPS8-219ENST00000469479 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
VPS8-219ENST00000469479 CARMIL1Q5VZK9 1371 aa8.22□□□□□ -1.09
VPS8-219ENST00000469479 CYP27A1Q02318 531 aa8.22□□□□□ -1.09
VPS8-219ENST00000469479 COL19A1Q14993 1142 aa8.22□□□□□ -1.09
VPS8-219ENST00000469479 CDPF1Q6NVV7 123 aa8.22□□□□□ -1.09
VPS8-219ENST00000469479 SHISA5Q8N114 240 aa8.22□□□□□ -1.09
VPS8-219ENST00000469479 PRKAG2Q9UGJ0 569 aa8.22□□□□□ -1.09
VPS8-219ENST00000469479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.22□□□□□ -1.09
VPS8-219ENST00000469479 DISP1Q96F81 1524 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms