RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PLEKHA4Q9H4M7 779 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 ERCC6L2Q5T890 1561 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 A0A1B0GUA9 196 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 PHACTR2O75167 634 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 UBTFL1P0CB47 393 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 LMOD1P29536 600 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 MICALCLQ6ZW33 695 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 CCDC50Q8IVM0 306 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 HOMEZQ8IX15 550 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 CLIC6Q96NY7 704 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 NAA15Q9BXJ9 866 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 TRIM6Q9C030 488 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 NEDD4P46934 1319 aa10.31□□□□□ -0.76
SMARCE1-207ENST00000469334 CTAGE9A4FU28 777 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 EIF3HO15372 352 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 RGPD1P0DJD0 1748 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 IRAK1P51617 712 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 ICA1Q05084 483 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 NBPF9Q3BBW0 867 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 IGSF22Q8N9C0 903 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 MAGEC3Q8TD91 643 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 USP28Q96RU2 1077 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 HSD3B7Q9H2F3 369 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 RTEL1Q9NZ71 1219 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 ODF2LQ9ULJ1 636 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 HPCAL4Q9UM19 191 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 CAPN7Q9Y6W3 813 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 LRRC37A3O60309 1634 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 KDM6AO15550 1401 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 EDC4Q6P2E9 1401 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 A0A087WWV3 80 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 ANKRD33BA6NCL7 494 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 BIRC2Q13490 618 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 DCTN1Q14203 1278 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 TOGARAM2Q6ZUX3 1019 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 G2E3Q7L622 706 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 IQCA1Q86XH1 822 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 KCNG4Q8TDN1 519 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 MYO1AQ9UBC5 1043 aa10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 PUF60Q9UHX1 559 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-207ENST00000469334 MON2Q7Z3U7 1717 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 JAK2O60674 1132 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 PFKFB2O60825 505 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 DTNBO60941 627 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 NEBLO76041 1014 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 YEATS4O95619 227 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 DRP2Q13474 957 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 CCDC148Q8NFR7 591 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 PANX2Q96RD6 677 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 CAPS2Q9BXY5 557 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 SUGCTQ9HAC7 445 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 PCDHA7Q9UN72 937 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 LAMA4Q16363 1823 aa10.29□□□□□ -0.76
SMARCE1-207ENST00000469334 TARSL2A2RTX5 802 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 ZEB2O60315 1214 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 CEBPZQ03701 1054 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 STIM1Q13586 685 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 OTUD6BQ8N6M0 293 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 TC2NQ8N9U0 490 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 BCAS4Q8TDM0 211 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 COG1Q8WTW3 980 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 ZSWIM4Q9H7M6 989 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 KAT14Q9H8E8 782 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 GGA2Q9UJY4 613 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 MED1Q15648 1581 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 MED23Q9ULK4 1368 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 NPATQ14207 1427 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 NUTM2FA1L443 756 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 GOLGA6CA6NDK9 693 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 MEFVO15553 781 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 RHOXF2BP0C7M4 288 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 GOLGA6DP0CG33 693 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 ATP1A3P13637 1013 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 SMTNP53814 917 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 GRIK3Q13003 919 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 FLIIQ13045 1269 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 NUTM2GQ5VZR2 741 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 SPECC1LQ69YQ0 1117 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 DPF2Q92785 391 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 FMNL2Q96PY5 1086 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 NAPGQ99747 312 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 RHOXF2Q9BQY4 288 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 CRACR2AQ9BSW2 395 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 ECHDC1Q9NTX5 307 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 GOLGA6AQ9NYA3 693 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 SPATA31D1Q6ZQQ2 1576 aa10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-207ENST00000469334 AGLP35573 1532 aa10.27□□□□□ -0.76
SMARCE1-207ENST00000469334 GOLGA8KD6RF30 607 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 NDUFA8P51970 172 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 SLC8A3P57103 927 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms