RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 HMGB1P09429 215 aaKnown RBP7.04□□□□□ -1.28
PRKD3-207ENST00000469275 FGFR2P21802 821 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 LRRFIP1Q32MZ4 808 aaKnown RBP7.04□□□□□ -1.28
PRKD3-207ENST00000469275 CCDC183Q5T5S1 534 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 BARGINQ6ZT62 677 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 CYB5R4Q7L1T6 521 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 MICU3Q86XE3 530 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 CCDC82Q8N4S0 544 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 BICD2Q8TD16 824 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
PRKD3-207ENST00000469275 SDR42E1Q8WUS8 393 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
PRKD3-207ENST00000469275 FBXW7Q969H0 707 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 USP25Q9UHP3 1055 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 ANKRD36CQ5JPF3 1778 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 CAPN15O75808 1086 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 CCDC173Q0VFZ6 552 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 MEX3CQ5U5Q3 659 aaKnown RBP7.04□□□□□ -1.28
PRKD3-207ENST00000469275 ADGRA1Q86SQ6 560 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 VPS37DQ86XT2 251 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 LCORLQ8N3X6 602 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 NCOA7Q8NI08 942 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 CHMP4CQ96CF2 233 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 EPB41L4AQ9HCS5 686 aaPredicted RBP7.04□□□□□ -1.28
PRKD3-207ENST00000469275 DACT1Q9NYF0 836 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 TFCP2L1Q9NZI6 479 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 CTNNA3Q9UI47 895 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 NEDD4P46934 1319 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 CPLX1O14810 134 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 ARID4AP29374 1257 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 MCM5P33992 734 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 ADD1P35611 737 aaKnown RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 TRDNQ13061 729 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 TTF1Q15361 905 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 PARP10Q53GL7 1025 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 MB21D2Q8IYB1 491 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 CMTR1Q8N1G2 835 aaKnown RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 LEO1Q8WVC0 666 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 PHKBQ93100 1093 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 NAPBQ9H115 298 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 ALDH8A1Q9H2A2 487 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 RAI14Q9P0K7 980 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 CCNL1Q9UK58 526 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 ZNF652Q9Y2D9 606 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 ABCC12Q96J65 1359 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 BCL9LQ86UU0 1499 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 TCRBV5S4A2TA0A5A2 114 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 MINDY4BA8MYZ0 360 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 NR1I2O75469 434 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 FDPSP14324 419 aaKnown RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 TDO2P48775 406 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 MAP3K12Q12852 859 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 RESTQ13127 1097 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 NFXL1Q6ZNB6 911 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 NBPF5PQ86XG9 351 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 ANKRD18AQ8IVF6 992 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 PROM2Q8N271 834 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 SMARCC1Q92922 1105 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 PGBD1Q96JS3 809 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 STRBPQ96SI9 672 aaKnown RBP7.03□□□□□ -1.28
PRKD3-207ENST00000469275 BCL2L12Q9HB09 334 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 TACC3Q9Y6A5 838 aa7.03□□□□□ -1.28
PRKD3-207ENST00000469275 CYP2D7A0A087X1C5 515 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 ZPR1O75312 459 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 UQCRFS1P1P0C7P4 283 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 EVX2Q03828 476 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 CHAF1AQ13111 956 aaPredicted RBP7.02□□□□□ -1.29
PRKD3-207ENST00000469275 ZSCAN25Q6NSZ9 544 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 IFNL3Q8IZI9 196 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 ZNF830Q96NB3 372 aaPredicted RBP7.02□□□□□ -1.29
PRKD3-207ENST00000469275 GPR101Q96P66 508 aaPredicted RBP7.02□□□□□ -1.29
PRKD3-207ENST00000469275 USP28Q96RU2 1077 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 HPS5Q9UPZ3 1129 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 SLC4A4Q9Y6R1 1079 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 CARMIL3Q8ND23 1372 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 ABCB7O75027 752 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 PTMAP06454 111 aaKnown RBP7.02□□□□□ -1.29
PRKD3-207ENST00000469275 CYP7A1P22680 504 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 DYNLL1P63167 89 aaKnown RBP7.02□□□□□ -1.29
PRKD3-207ENST00000469275 UBE3CQ15386 1083 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 SETDB2Q96T68 719 aa7.02□□□□□ -1.29
PRKD3-207ENST00000469275 CDC5LQ99459 802 aaKnown RBP7.02□□□□□ -1.29
PRKD3-207ENST00000469275 ORC3Q9UBD5 711 aaPredicted RBP7.02□□□□□ -1.29
PRKD3-207ENST00000469275 PRDM1O75626 825 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 CDC27P30260 824 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 VPS72Q15906 364 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 CSPP1Q1MSJ5 1256 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 ARHGEF1Q92888 912 aaKnown RBP7.01□□□□□ -1.29
PRKD3-207ENST00000469275 PPP1R9BQ96SB3 815 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 AGXT2Q9BYV1 514 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 NUP62CLQ9H1M0 184 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 MINPP1Q9UNW1 487 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 MYH7P12883 1935 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 GSG1L2A8MUP6 293 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 ILDR1Q86SU0 546 aaPredicted RBP7.01□□□□□ -1.29
PRKD3-207ENST00000469275 TXNRD3Q86VQ6 643 aa7.01□□□□□ -1.29
PRKD3-207ENST00000469275 ZNF274Q96GC6 653 aaPredicted RBP7.01□□□□□ -1.29
PRKD3-207ENST00000469275 C8orf76Q96K31 380 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms