RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 MAGEA10P43363 369 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-217ENST00000469223 CTSWP56202 376 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 C17orf99Q6UX52 265 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 SLAIN1Q8ND83 568 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 DIS3LQ8TF46 1054 aaKnown RBP16.39■□□□□ 0.21
HDAC6-217ENST00000469223 GUCD1Q96NT3 240 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 MYD88Q99836 296 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-217ENST00000469223 DOCK3Q8IZD9 2030 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 IRS2Q9Y4H2 1338 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 MAP3K9P80192 1104 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 TNFAIP1Q13829 316 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 RIC3Q7Z5B4 369 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
HDAC6-217ENST00000469223 TEPSINQ96N21 525 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 GREM2Q9H772 168 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
HDAC6-217ENST00000469223 TFRCP02786 760 aaKnown RBP16.37■□□□□ 0.21
HDAC6-217ENST00000469223 SYN1P17600 705 aa16.37■□□□□ 0.21
HDAC6-217ENST00000469223 RBM5P52756 815 aaKnown RBP eCLIP16.37■□□□□ 0.21
HDAC6-217ENST00000469223 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
HDAC6-217ENST00000469223 HELBQ8NG08 1087 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-217ENST00000469223 DEFB118Q96PH6 123 aa16.37■□□□□ 0.21
HDAC6-217ENST00000469223 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
HDAC6-217ENST00000469223 RAPGEFL1Q9UHV5 662 aa16.37■□□□□ 0.21
HDAC6-217ENST00000469223 IRF6O14896 467 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 INHAP05111 366 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 SNAPC2Q13487 334 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 CCDC191Q8NCU4 936 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 FAM161BQ96MY7 647 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 CD209Q9NNX6 404 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-217ENST00000469223 JAG2Q9Y219 1238 aa16.36■□□□□ 0.21
HDAC6-217ENST00000469223 ELNP15502 786 aa16.35■□□□□ 0.21
HDAC6-217ENST00000469223 RIPK4P57078 832 aa16.35■□□□□ 0.21
HDAC6-217ENST00000469223 UBE2OQ9C0C9 1292 aaKnown RBP16.35■□□□□ 0.21
HDAC6-217ENST00000469223 TMEM39BQ9GZU3 492 aa16.35■□□□□ 0.21
HDAC6-217ENST00000469223 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-217ENST00000469223 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
HDAC6-217ENST00000469223 ADCY3O60266 1144 aa16.34■□□□□ 0.21
HDAC6-217ENST00000469223 KCNJ4P48050 445 aa16.34■□□□□ 0.21
HDAC6-217ENST00000469223 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
HDAC6-217ENST00000469223 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
HDAC6-217ENST00000469223 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-217ENST00000469223 TCP10L2B9ZVM9 353 aa16.33■□□□□ 0.2
HDAC6-217ENST00000469223 HOXB7P09629 217 aa16.33■□□□□ 0.2
HDAC6-217ENST00000469223 FCGRTP55899 365 aa16.33■□□□□ 0.2
HDAC6-217ENST00000469223 PPIL2Q13356 520 aa16.33■□□□□ 0.2
HDAC6-217ENST00000469223 ERO1BQ86YB8 467 aa16.33■□□□□ 0.2
HDAC6-217ENST00000469223 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
HDAC6-217ENST00000469223 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.2
HDAC6-217ENST00000469223 PDHXO00330 501 aa16.32■□□□□ 0.2
HDAC6-217ENST00000469223 PTPRFP10586 1907 aa16.32■□□□□ 0.2
HDAC6-217ENST00000469223 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
HDAC6-217ENST00000469223 ZKSCAN4Q969J2 545 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-217ENST00000469223 ANKRD2Q9GZV1 360 aa16.32■□□□□ 0.2
HDAC6-217ENST00000469223 PAK6Q9NQU5 681 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-217ENST00000469223 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
HDAC6-217ENST00000469223 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
HDAC6-217ENST00000469223 FAM205AQ6ZU69 1335 aa16.31■□□□□ 0.2
HDAC6-217ENST00000469223 SNAP23O00161 211 aa16.31■□□□□ 0.2
HDAC6-217ENST00000469223 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
HDAC6-217ENST00000469223 PHAXQ9H814 394 aaKnown RBP16.31■□□□□ 0.2
HDAC6-217ENST00000469223 PLA2G5P39877 138 aa16.3■□□□□ 0.2
HDAC6-217ENST00000469223 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
HDAC6-217ENST00000469223 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
HDAC6-217ENST00000469223 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-217ENST00000469223 CHL1O00533 1208 aa16.29■□□□□ 0.2
HDAC6-217ENST00000469223 TNNI2P48788 182 aa16.29■□□□□ 0.2
HDAC6-217ENST00000469223 FKBP1AP62942 108 aaKnown RBP16.29■□□□□ 0.2
HDAC6-217ENST00000469223 MAFAQ8NHW3 353 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-217ENST00000469223 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
HDAC6-217ENST00000469223 MAST2Q6P0Q8 1798 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 BCRP11274 1271 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 IL1R1P14778 569 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 CAPN2P17655 700 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 FLT3LGP49771 235 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 CHRNDQ07001 517 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-217ENST00000469223 ZNF804AQ7Z570 1209 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
HDAC6-217ENST00000469223 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDAC6-217ENST00000469223 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 PIEZO1Q92508 2521 aa16.28■□□□□ 0.2
HDAC6-217ENST00000469223 POTEB2H3BUK9 544 aa16.27■□□□□ 0.2
HDAC6-217ENST00000469223 MPHOSPH8Q99549 860 aa16.27■□□□□ 0.2
HDAC6-217ENST00000469223 LTBP2Q14767 1821 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 CYP2C8P10632 490 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 ITGA6P23229 1130 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 TMPOP42166 694 aaKnown RBP16.26■□□□□ 0.19
HDAC6-217ENST00000469223 CACNB3P54284 484 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 ZNF697Q5TEC3 545 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
HDAC6-217ENST00000469223 ANKLE1Q8NAG6 615 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 PXYLP1Q8TE99 480 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms