RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 ZNF594Q96JF6 807 aaPredicted RBP24.77■■□□□ 1.56
UPK3B-204ENST00000469114 WDHD1O75717 1129 aaPredicted RBP24.76■■□□□ 1.55
UPK3B-204ENST00000469114 MAP3K9P80192 1104 aa24.76■■□□□ 1.55
UPK3B-204ENST00000469114 TDRD7Q8NHU6 1098 aaKnown RBP24.76■■□□□ 1.55
UPK3B-204ENST00000469114 TEPSINQ96N21 525 aa24.76■■□□□ 1.55
UPK3B-204ENST00000469114 CSADQ9Y600 493 aa24.76■■□□□ 1.55
UPK3B-204ENST00000469114 PTCH2Q9Y6C5 1203 aa24.76■■□□□ 1.55
UPK3B-204ENST00000469114 CEP290O15078 2479 aa24.75■■□□□ 1.55
UPK3B-204ENST00000469114 FXR1P51114 621 aaKnown RBP eCLIP24.75■■□□□ 1.55
UPK3B-204ENST00000469114 VGLL4Q14135 290 aa24.75■■□□□ 1.55
UPK3B-204ENST00000469114 BEND3Q5T5X7 828 aa24.75■■□□□ 1.55
UPK3B-204ENST00000469114 DZIP1LQ8IYY4 767 aaKnown RBP24.75■■□□□ 1.55
UPK3B-204ENST00000469114 CNKSR2Q8WXI2 1034 aa24.75■■□□□ 1.55
UPK3B-204ENST00000469114 TCP10L2B9ZVM9 353 aa24.74■■□□□ 1.55
UPK3B-204ENST00000469114 HIBADHP31937 336 aaKnown RBP24.74■■□□□ 1.55
UPK3B-204ENST00000469114 UBE4AQ14139 1066 aa24.74■■□□□ 1.55
UPK3B-204ENST00000469114 SLC4A8Q2Y0W8 1093 aa24.74■■□□□ 1.55
UPK3B-204ENST00000469114 EPHA10Q5JZY3 1008 aa24.74■■□□□ 1.55
UPK3B-204ENST00000469114 CDAN1Q8IWY9 1227 aa24.74■■□□□ 1.55
UPK3B-204ENST00000469114 FANCIQ9NVI1 1328 aa24.74■■□□□ 1.55
UPK3B-204ENST00000469114 F6X3S4 739 aa24.73■■□□□ 1.55
UPK3B-204ENST00000469114 CRKP46108 304 aa24.73■■□□□ 1.55
UPK3B-204ENST00000469114 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.73■■□□□ 1.55
UPK3B-204ENST00000469114 OTUD5Q96G74 571 aa24.73■■□□□ 1.55
UPK3B-204ENST00000469114 TMEM39BQ9GZU3 492 aa24.73■■□□□ 1.55
UPK3B-204ENST00000469114 GRM8O00222 908 aa24.72■■□□□ 1.55
UPK3B-204ENST00000469114 VAMP4O75379 141 aa24.72■■□□□ 1.55
UPK3B-204ENST00000469114 GYG1P46976 350 aa24.72■■□□□ 1.55
UPK3B-204ENST00000469114 FAM43AQ8N2R8 423 aa24.72■■□□□ 1.55
UPK3B-204ENST00000469114 KIF22Q14807 665 aa24.71■■□□□ 1.55
UPK3B-204ENST00000469114 NCBP3Q53F19 620 aaKnown RBP24.71■■□□□ 1.55
UPK3B-204ENST00000469114 FAM84BQ96KN1 310 aaPredicted RBP24.71■■□□□ 1.55
UPK3B-204ENST00000469114 SPDYE5A6NIY4 337 aa24.7■■□□□ 1.54
UPK3B-204ENST00000469114 MRS2Q9HD23 443 aa24.7■■□□□ 1.54
UPK3B-204ENST00000469114 C9orf78Q9NZ63 289 aaPredicted RBP24.7■■□□□ 1.54
UPK3B-204ENST00000469114 COLQQ9Y215 455 aaPredicted RBP24.7■■□□□ 1.54
UPK3B-204ENST00000469114 CETPP11597 493 aa24.69■■□□□ 1.54
UPK3B-204ENST00000469114 ZCCHC17Q9NP64 241 aaKnown RBP24.69■■□□□ 1.54
UPK3B-204ENST00000469114 TLR2O60603 784 aa24.68■■□□□ 1.54
UPK3B-204ENST00000469114 ERO1BQ86YB8 467 aa24.68■■□□□ 1.54
UPK3B-204ENST00000469114 TRIOBPQ9H2D6 2365 aa24.68■■□□□ 1.54
UPK3B-204ENST00000469114 MYCP01106 439 aaPredicted RBP24.67■■□□□ 1.54
UPK3B-204ENST00000469114 HDLBPQ00341 1268 aaKnown RBP24.67■■□□□ 1.54
UPK3B-204ENST00000469114 VPS37DQ86XT2 251 aa24.67■■□□□ 1.54
UPK3B-204ENST00000469114 TBC1D22AQ8WUA7 517 aa24.67■■□□□ 1.54
UPK3B-204ENST00000469114 GNRH1P01148 92 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 PRMT2P55345 433 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 LACTBP83111 547 aaPredicted RBP24.66■■□□□ 1.54
UPK3B-204ENST00000469114 EXOSC9Q06265 439 aaKnown RBP24.66■■□□□ 1.54
UPK3B-204ENST00000469114 SNAPC2Q13487 334 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 CCDC184Q52MB2 194 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 SH3TC2Q8TF17 1288 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 HOOK2Q96ED9 719 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 TMOD2Q9NZR1 351 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 SNCAIPQ9Y6H5 919 aa24.66■■□□□ 1.54
UPK3B-204ENST00000469114 ZSWIM8A7E2V4 1837 aa24.65■■□□□ 1.54
UPK3B-204ENST00000469114 MROH5Q6ZUA9 1318 aa24.65■■□□□ 1.54
UPK3B-204ENST00000469114 ALDH1L1O75891 902 aa24.65■■□□□ 1.54
UPK3B-204ENST00000469114 CHAF1AQ13111 956 aaPredicted RBP24.65■■□□□ 1.54
UPK3B-204ENST00000469114 TEKT1Q969V4 418 aa24.65■■□□□ 1.54
UPK3B-204ENST00000469114 WRNIP1Q96S55 665 aa24.65■■□□□ 1.54
UPK3B-204ENST00000469114 PUS3Q9BZE2 481 aaKnown RBP24.65■■□□□ 1.54
UPK3B-204ENST00000469114 ARHGAP39Q9C0H5 1083 aa24.65■■□□□ 1.54
UPK3B-204ENST00000469114 BTBD19C9JJ37 291 aa24.64■■□□□ 1.54
UPK3B-204ENST00000469114 FRAT2O75474 233 aaPredicted RBP24.64■■□□□ 1.54
UPK3B-204ENST00000469114 WDR63Q8IWG1 891 aa24.64■■□□□ 1.54
UPK3B-204ENST00000469114 H0YGN5 161 aa24.63■■□□□ 1.53
UPK3B-204ENST00000469114 CACNB3P54284 484 aa24.63■■□□□ 1.53
UPK3B-204ENST00000469114 PPIL2Q13356 520 aa24.63■■□□□ 1.53
UPK3B-204ENST00000469114 GRIK5Q16478 980 aa24.63■■□□□ 1.53
UPK3B-204ENST00000469114 FBXO33Q7Z6M2 555 aa24.63■■□□□ 1.53
UPK3B-204ENST00000469114 FAM83AQ86UY5 434 aa24.63■■□□□ 1.53
UPK3B-204ENST00000469114 IQSEC3Q9UPP2 1182 aaPredicted RBP24.63■■□□□ 1.53
UPK3B-204ENST00000469114 RIPOR2Q9Y4F9 1068 aa24.63■■□□□ 1.53
UPK3B-204ENST00000469114 IRF6O14896 467 aa24.62■■□□□ 1.53
UPK3B-204ENST00000469114 CAVIN4Q5BKX8 364 aa24.62■■□□□ 1.53
UPK3B-204ENST00000469114 FKBP1CQ5VVH2 108 aa24.62■■□□□ 1.53
UPK3B-204ENST00000469114 DCAF15Q66K64 600 aa24.62■■□□□ 1.53
UPK3B-204ENST00000469114 ZKSCAN4Q969J2 545 aaPredicted RBP24.62■■□□□ 1.53
UPK3B-204ENST00000469114 SRCIN1Q9C0H9 1055 aa24.62■■□□□ 1.53
UPK3B-204ENST00000469114 SLC4A10Q6U841 1118 aa24.61■■□□□ 1.53
UPK3B-204ENST00000469114 SUCLG2Q96I99 432 aa24.61■■□□□ 1.53
UPK3B-204ENST00000469114 ZDHHC15Q96MV8 337 aa24.61■■□□□ 1.53
UPK3B-204ENST00000469114 MAST3O60307 1309 aa24.61■■□□□ 1.53
UPK3B-204ENST00000469114 MRIQ9BWK5 157 aa24.6■■□□□ 1.53
UPK3B-204ENST00000469114 RPAP1Q9BWH6 1393 aaPredicted RBP24.59■■□□□ 1.53
UPK3B-204ENST00000469114 PPATQ06203 517 aa24.59■■□□□ 1.53
UPK3B-204ENST00000469114 METTL24Q5JXM2 366 aa24.59■■□□□ 1.53
UPK3B-204ENST00000469114 SALL2Q9Y467 1007 aaPredicted RBP24.59■■□□□ 1.53
UPK3B-204ENST00000469114 C17orf99Q6UX52 265 aa24.58■■□□□ 1.53
UPK3B-204ENST00000469114 KAZALD1Q96I82 304 aa24.58■■□□□ 1.53
UPK3B-204ENST00000469114 ZNF341Q9BYN7 854 aa24.58■■□□□ 1.53
UPK3B-204ENST00000469114 SUGT1Q9Y2Z0 365 aa24.58■■□□□ 1.53
UPK3B-204ENST00000469114 HOXD10P28358 340 aa24.57■■□□□ 1.52
UPK3B-204ENST00000469114 APOBEC3HQ6NTF7 200 aaKnown RBP24.57■■□□□ 1.52
UPK3B-204ENST00000469114 NKX2-3Q8TAU0 364 aa24.57■■□□□ 1.52
UPK3B-204ENST00000469114 SRRDQ9UH36 339 aa24.57■■□□□ 1.52
UPK3B-204ENST00000469114 ECM2O94769 699 aaPredicted RBP24.56■■□□□ 1.52
UPK3B-204ENST00000469114 PSMC4P43686 418 aa24.56■■□□□ 1.52
UPK3B-204ENST00000469114 MTFR1Q15390 333 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms