RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 ATG9AQ7Z3C6 839 aa18.53■□□□□ 0.56
SDCCAG3-209ENST00000468963 CTU1Q7Z7A3 348 aaKnown RBP18.53■□□□□ 0.56
SDCCAG3-209ENST00000468963 TEPSINQ96N21 525 aa18.53■□□□□ 0.56
SDCCAG3-209ENST00000468963 GPR25O00155 361 aa18.52■□□□□ 0.56
SDCCAG3-209ENST00000468963 IFIT1P09914 478 aaKnown RBP18.52■□□□□ 0.56
SDCCAG3-209ENST00000468963 INHBEP58166 350 aa18.52■□□□□ 0.56
SDCCAG3-209ENST00000468963 ZNF296Q8WUU4 475 aaPredicted RBP18.52■□□□□ 0.56
SDCCAG3-209ENST00000468963 WNK4Q96J92 1243 aa18.52■□□□□ 0.56
SDCCAG3-209ENST00000468963 API5Q9BZZ5 524 aaKnown RBP18.52■□□□□ 0.56
SDCCAG3-209ENST00000468963 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
SDCCAG3-209ENST00000468963 MANSC4A6NHS7 340 aaPredicted RBP18.51■□□□□ 0.55
SDCCAG3-209ENST00000468963 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
SDCCAG3-209ENST00000468963 ZBTB48P10074 688 aaPredicted RBP18.51■□□□□ 0.55
SDCCAG3-209ENST00000468963 RARSP54136 660 aaKnown RBP18.51■□□□□ 0.55
SDCCAG3-209ENST00000468963 TNFAIP1Q13829 316 aa18.51■□□□□ 0.55
SDCCAG3-209ENST00000468963 FBXO3Q9UK99 471 aa18.51■□□□□ 0.55
SDCCAG3-209ENST00000468963 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
SDCCAG3-209ENST00000468963 IREB2P48200 963 aaKnown RBP18.5■□□□□ 0.55
SDCCAG3-209ENST00000468963 CDAN1Q8IWY9 1227 aa18.5■□□□□ 0.55
SDCCAG3-209ENST00000468963 LPIN2Q92539 896 aa18.5■□□□□ 0.55
SDCCAG3-209ENST00000468963 SUGT1Q9Y2Z0 365 aa18.5■□□□□ 0.55
SDCCAG3-209ENST00000468963 TCP10L2B9ZVM9 353 aa18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 CIAO1O76071 339 aa18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 GJA5P36382 358 aa18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 MLLT1Q03111 559 aaPredicted RBP18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 IFNL1Q8IU54 200 aa18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 ANKRD13AQ8IZ07 590 aa18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 ZDHHC15Q96MV8 337 aa18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
SDCCAG3-209ENST00000468963 ALDH1A1P00352 501 aa18.48■□□□□ 0.55
SDCCAG3-209ENST00000468963 SLC5A1P13866 664 aa18.48■□□□□ 0.55
SDCCAG3-209ENST00000468963 APOBEC3HQ6NTF7 200 aaKnown RBP18.48■□□□□ 0.55
SDCCAG3-209ENST00000468963 TEKT1Q969V4 418 aa18.48■□□□□ 0.55
SDCCAG3-209ENST00000468963 TMEM39BQ9GZU3 492 aa18.48■□□□□ 0.55
SDCCAG3-209ENST00000468963 LRRFIP2Q9Y608 721 aaKnown RBP18.48■□□□□ 0.55
SDCCAG3-209ENST00000468963 IGF2BP3O00425 579 aaKnown RBP eCLIP18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 TNNI2P48788 182 aa18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 PKN2Q16513 984 aaKnown RBP18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 INTS3Q68E01 1043 aaKnown RBP18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 HHIPL2Q6UWX4 724 aa18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 CEP126Q9P2H0 1117 aa18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 HDAC5Q9UQL6 1122 aa18.47■□□□□ 0.55
SDCCAG3-209ENST00000468963 TESPA1A2RU30 521 aaPredicted RBP18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 FKTNO75072 461 aa18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 FKBP1CQ5VVH2 108 aa18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 WDR66Q8TBY9 1149 aa18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 MEIS3Q99687 375 aa18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 SIL1Q9H173 461 aa18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 COPRSQ9NQ92 184 aa18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 ARAP2Q8WZ64 1704 aa18.46■□□□□ 0.55
SDCCAG3-209ENST00000468963 TNRC18O15417 2968 aaPredicted RBP18.45■□□□□ 0.54
SDCCAG3-209ENST00000468963 IL15P40933 162 aaPredicted RBP18.45■□□□□ 0.54
SDCCAG3-209ENST00000468963 CACNB3P54284 484 aa18.45■□□□□ 0.54
SDCCAG3-209ENST00000468963 MAP3K9P80192 1104 aa18.45■□□□□ 0.54
SDCCAG3-209ENST00000468963 FAM83AQ86UY5 434 aa18.45■□□□□ 0.54
SDCCAG3-209ENST00000468963 PTPN18Q99952 460 aa18.45■□□□□ 0.54
SDCCAG3-209ENST00000468963 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
SDCCAG3-209ENST00000468963 ZBTB22O15209 634 aa18.44■□□□□ 0.54
SDCCAG3-209ENST00000468963 ATP2B3Q16720 1220 aa18.44■□□□□ 0.54
SDCCAG3-209ENST00000468963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.54
SDCCAG3-209ENST00000468963 MS4A4AQ96JQ5 239 aa18.44■□□□□ 0.54
SDCCAG3-209ENST00000468963 ELP3Q9H9T3 547 aa18.44■□□□□ 0.54
SDCCAG3-209ENST00000468963 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
SDCCAG3-209ENST00000468963 MAST3O60307 1309 aa18.44■□□□□ 0.54
SDCCAG3-209ENST00000468963 OPTNQ96CV9 577 aa18.43■□□□□ 0.54
SDCCAG3-209ENST00000468963 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
SDCCAG3-209ENST00000468963 GNAI3P08754 354 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 PHKA1P46020 1223 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 SOX10P56693 466 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 TIMM10P62072 90 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 MTX1Q13505 466 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 VGLL4Q14135 290 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 OTUD7BQ6GQQ9 843 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 FBXO46Q6PJ61 603 aaPredicted RBP18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 GNL3LQ9NVN8 582 aaKnown RBP18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 TMOD2Q9NZR1 351 aa18.41■□□□□ 0.54
SDCCAG3-209ENST00000468963 LAMB1P07942 1786 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 SEMA3EO15041 775 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 BCAR3O75815 825 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 PRDX5P30044 214 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 ADORA1P30542 326 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 DENND2AQ9ULE3 1009 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 DAGLAQ9Y4D2 1042 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 SALL1Q9NSC2 1324 aa18.4■□□□□ 0.54
SDCCAG3-209ENST00000468963 TRIM27P14373 513 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 CRHR2Q13324 411 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 DIXDC1Q155Q3 683 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 CCDC102BQ68D86 513 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 CDC42EP5Q6NZY7 148 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 FAM151AQ8WW52 585 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 BRI3BPQ8WY22 251 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 TNNQ9UQP3 1299 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 CSADQ9Y600 493 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 PDE4DIPQ5VU43 2346 aa18.39■□□□□ 0.53
SDCCAG3-209ENST00000468963 HTTP42858 3142 aa18.38■□□□□ 0.53
SDCCAG3-209ENST00000468963 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
SDCCAG3-209ENST00000468963 LDHBP07195 334 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms