RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 ZBTB7BO15156 539 aaPredicted RBP16.04■□□□□ 0.16
CLRN1-204ENST00000468836 AOC2O75106 756 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
CLRN1-204ENST00000468836 MAP2K2P36507 400 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 PHKA1P46020 1223 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 TNNI2P48788 182 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 TIMM10P62072 90 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 CCDC102BQ68D86 513 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 ARMC9Q7Z3E5 817 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 ZGPATQ8N5A5 531 aaKnown RBP16.04■□□□□ 0.16
CLRN1-204ENST00000468836 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 PCDHAC2Q9Y5I4 1007 aa16.04■□□□□ 0.16
CLRN1-204ENST00000468836 ADORA1P30542 326 aa16.03■□□□□ 0.16
CLRN1-204ENST00000468836 CTCFP49711 727 aaPredicted RBP16.03■□□□□ 0.16
CLRN1-204ENST00000468836 HDLBPQ00341 1268 aaKnown RBP16.03■□□□□ 0.16
CLRN1-204ENST00000468836 PRKG1Q13976 671 aa16.03■□□□□ 0.16
CLRN1-204ENST00000468836 XAGE2Q96GT9 111 aa16.03■□□□□ 0.16
CLRN1-204ENST00000468836 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
CLRN1-204ENST00000468836 TDRD3Q9H7E2 651 aaKnown RBP16.03■□□□□ 0.16
CLRN1-204ENST00000468836 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.16
CLRN1-204ENST00000468836 POLA2Q14181 598 aa16.02■□□□□ 0.16
CLRN1-204ENST00000468836 SUPT20HL1Q3ZLR7 823 aa16.02■□□□□ 0.16
CLRN1-204ENST00000468836 SSH3Q8TE77 659 aa16.02■□□□□ 0.16
CLRN1-204ENST00000468836 WBP1LQ9NX94 342 aa16.02■□□□□ 0.16
CLRN1-204ENST00000468836 ZNF70Q9UC06 446 aaPredicted RBP16.02■□□□□ 0.16
CLRN1-204ENST00000468836 COG6Q9Y2V7 657 aa16.02■□□□□ 0.16
CLRN1-204ENST00000468836 PAPPA2Q9BXP8 1791 aa16.01■□□□□ 0.15
CLRN1-204ENST00000468836 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
CLRN1-204ENST00000468836 UBE2Q2LH0YL09 131 aa16.01■□□□□ 0.15
CLRN1-204ENST00000468836 FOXN1O15353 648 aa16.01■□□□□ 0.15
CLRN1-204ENST00000468836 PPP1R12BO60237 982 aaPredicted RBP16.01■□□□□ 0.15
CLRN1-204ENST00000468836 RASA3Q14644 834 aa16.01■□□□□ 0.15
CLRN1-204ENST00000468836 GRIK5Q16478 980 aa16.01■□□□□ 0.15
CLRN1-204ENST00000468836 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
CLRN1-204ENST00000468836 DZIP1Q86YF9 867 aaKnown RBP16.01■□□□□ 0.15
CLRN1-204ENST00000468836 ANGEL1Q9UNK9 670 aaKnown RBP16.01■□□□□ 0.15
CLRN1-204ENST00000468836 ARAP2Q8WZ64 1704 aa16■□□□□ 0.15
CLRN1-204ENST00000468836 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
CLRN1-204ENST00000468836 CEP85Q6P2H3 762 aa16■□□□□ 0.15
CLRN1-204ENST00000468836 MOB2Q70IA6 237 aa16■□□□□ 0.15
CLRN1-204ENST00000468836 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
CLRN1-204ENST00000468836 ABCF2Q9UG63 623 aa16■□□□□ 0.15
CLRN1-204ENST00000468836 PCNTO95613 3336 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 CA12O43570 354 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 HMMRO75330 724 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 SLC10A3P09131 477 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 PRDX5P30044 214 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 CCDC158Q5M9N0 1113 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 TTC39AQ5SRH9 613 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 HHIPL2Q6UWX4 724 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 ERC1Q8IUD2 1116 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 SLF2Q8IX21 1173 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 ZDHHC15Q96MV8 337 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 MRIQ9BWK5 157 aa15.99■□□□□ 0.15
CLRN1-204ENST00000468836 SALL1Q9NSC2 1324 aa15.98■□□□□ 0.15
CLRN1-204ENST00000468836 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
CLRN1-204ENST00000468836 IREB2P48200 963 aaKnown RBP15.98■□□□□ 0.15
CLRN1-204ENST00000468836 HSP90AB4PQ58FF6 505 aa15.98■□□□□ 0.15
CLRN1-204ENST00000468836 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
CLRN1-204ENST00000468836 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
CLRN1-204ENST00000468836 RASAL3Q86YV0 1011 aa15.98■□□□□ 0.15
CLRN1-204ENST00000468836 GPR108Q9NPR9 543 aa15.98■□□□□ 0.15
CLRN1-204ENST00000468836 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
CLRN1-204ENST00000468836 THSD7BQ9C0I4 1608 aa15.97■□□□□ 0.15
CLRN1-204ENST00000468836 AOX1Q06278 1338 aa15.97■□□□□ 0.15
CLRN1-204ENST00000468836 PDS5AQ29RF7 1337 aaKnown RBP15.97■□□□□ 0.15
CLRN1-204ENST00000468836 KIF23Q02241 960 aaPredicted RBP15.97■□□□□ 0.15
CLRN1-204ENST00000468836 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
CLRN1-204ENST00000468836 FAM155AB1AL88 458 aaPredicted RBP15.96■□□□□ 0.15
CLRN1-204ENST00000468836 LBX1P52954 281 aa15.96■□□□□ 0.15
CLRN1-204ENST00000468836 CACNB3P54284 484 aa15.96■□□□□ 0.15
CLRN1-204ENST00000468836 DIXDC1Q155Q3 683 aa15.96■□□□□ 0.15
CLRN1-204ENST00000468836 NBPF12Q5TAG4 269 aaPredicted RBP15.96■□□□□ 0.15
CLRN1-204ENST00000468836 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.15
CLRN1-204ENST00000468836 RPAP2Q8IXW5 612 aaPredicted RBP15.96■□□□□ 0.15
CLRN1-204ENST00000468836 REM2Q8IYK8 340 aaPredicted RBP15.96■□□□□ 0.15
CLRN1-204ENST00000468836 SPATA5Q8NB90 893 aa15.96■□□□□ 0.15
CLRN1-204ENST00000468836 HOOK2Q96ED9 719 aa15.96■□□□□ 0.15
CLRN1-204ENST00000468836 EXOC6BQ9Y2D4 811 aa15.96■□□□□ 0.15
CLRN1-204ENST00000468836 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.15
CLRN1-204ENST00000468836 CAPN15O75808 1086 aa15.95■□□□□ 0.14
CLRN1-204ENST00000468836 HSPA8P11142 646 aaKnown RBP15.95■□□□□ 0.14
CLRN1-204ENST00000468836 ARID4AP29374 1257 aaPredicted RBP15.95■□□□□ 0.14
CLRN1-204ENST00000468836 APOBEC3HQ6NTF7 200 aaKnown RBP15.95■□□□□ 0.14
CLRN1-204ENST00000468836 TNS4Q8IZW8 715 aa15.95■□□□□ 0.14
CLRN1-204ENST00000468836 TMEM39BQ9GZU3 492 aa15.95■□□□□ 0.14
CLRN1-204ENST00000468836 PRDM10Q9NQV6 1147 aa15.95■□□□□ 0.14
CLRN1-204ENST00000468836 DAGLAQ9Y4D2 1042 aa15.95■□□□□ 0.14
CLRN1-204ENST00000468836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
CLRN1-204ENST00000468836 ZBTB22O15209 634 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 GSTO1P78417 241 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 MKRN3Q13064 507 aaKnown RBP15.94■□□□□ 0.14
CLRN1-204ENST00000468836 SLC10A4Q96EP9 437 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 DBNDD2Q9BQY9 259 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 RAI14Q9P0K7 980 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms