RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 TTF2Q9UNY4 1162 aaKnown RBP19.65■□□□□ 0.74
SRRM1-207ENST00000468822 VGLL4Q14135 290 aa19.64■□□□□ 0.73
SRRM1-207ENST00000468822 DZIP1LQ8IYY4 767 aaKnown RBP19.64■□□□□ 0.73
SRRM1-207ENST00000468822 FAM43AQ8N2R8 423 aa19.64■□□□□ 0.73
SRRM1-207ENST00000468822 FAM84BQ96KN1 310 aaPredicted RBP19.64■□□□□ 0.73
SRRM1-207ENST00000468822 PUS3Q9BZE2 481 aaKnown RBP19.64■□□□□ 0.73
SRRM1-207ENST00000468822 SERPINA10Q9UK55 444 aa19.64■□□□□ 0.73
SRRM1-207ENST00000468822 PTCH2Q9Y6C5 1203 aa19.64■□□□□ 0.73
SRRM1-207ENST00000468822 TCP10L2B9ZVM9 353 aa19.63■□□□□ 0.73
SRRM1-207ENST00000468822 EXOSC9Q06265 439 aaKnown RBP19.63■□□□□ 0.73
SRRM1-207ENST00000468822 CCDC57Q2TAC2 916 aa19.63■□□□□ 0.73
SRRM1-207ENST00000468822 CNNM1Q9NRU3 951 aa19.63■□□□□ 0.73
SRRM1-207ENST00000468822 CCL15-CCL14A0A0B4J2E2 113 aa19.62■□□□□ 0.73
SRRM1-207ENST00000468822 GRM8O00222 908 aa19.62■□□□□ 0.73
SRRM1-207ENST00000468822 HOXD11P31277 338 aaPredicted RBP19.62■□□□□ 0.73
SRRM1-207ENST00000468822 FXR1P51114 621 aaKnown RBP eCLIP19.62■□□□□ 0.73
SRRM1-207ENST00000468822 CCL15Q16663 113 aa19.62■□□□□ 0.73
SRRM1-207ENST00000468822 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.62■□□□□ 0.73
SRRM1-207ENST00000468822 KAZALD1Q96I82 304 aa19.62■□□□□ 0.73
SRRM1-207ENST00000468822 ZSWIM8A7E2V4 1837 aa19.62■□□□□ 0.73
SRRM1-207ENST00000468822 TRIOBPQ9H2D6 2365 aa19.62■□□□□ 0.73
SRRM1-207ENST00000468822 CACNA1FO60840 1977 aa19.61■□□□□ 0.73
SRRM1-207ENST00000468822 CRKP46108 304 aa19.61■□□□□ 0.73
SRRM1-207ENST00000468822 TNFAIP1Q13829 316 aa19.61■□□□□ 0.73
SRRM1-207ENST00000468822 TAF1CQ15572 869 aaPredicted RBP19.61■□□□□ 0.73
SRRM1-207ENST00000468822 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
SRRM1-207ENST00000468822 TAF7LQ5H9L4 462 aa19.61■□□□□ 0.73
SRRM1-207ENST00000468822 ARHGAP39Q9C0H5 1083 aa19.61■□□□□ 0.73
SRRM1-207ENST00000468822 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
SRRM1-207ENST00000468822 ARAP2Q8WZ64 1704 aa19.6■□□□□ 0.73
SRRM1-207ENST00000468822 MYCP01106 439 aaPredicted RBP19.6■□□□□ 0.73
SRRM1-207ENST00000468822 HIBADHP31937 336 aaKnown RBP19.6■□□□□ 0.73
SRRM1-207ENST00000468822 CACNB3P54284 484 aa19.6■□□□□ 0.73
SRRM1-207ENST00000468822 MAP3K9P80192 1104 aa19.6■□□□□ 0.73
SRRM1-207ENST00000468822 UBE4AQ14139 1066 aa19.6■□□□□ 0.73
SRRM1-207ENST00000468822 OTUD5Q96G74 571 aa19.6■□□□□ 0.73
SRRM1-207ENST00000468822 IQSEC3Q9UPP2 1182 aaPredicted RBP19.6■□□□□ 0.73
SRRM1-207ENST00000468822 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
SRRM1-207ENST00000468822 GTF2A2P52657 109 aa19.59■□□□□ 0.73
SRRM1-207ENST00000468822 SLC9C1Q4G0N8 1177 aa19.59■□□□□ 0.73
SRRM1-207ENST00000468822 ZFYVE28Q9HCC9 887 aa19.59■□□□□ 0.73
SRRM1-207ENST00000468822 SUCLG2Q96I99 432 aa19.58■□□□□ 0.72
SRRM1-207ENST00000468822 TMEM106CQ9BVX2 250 aa19.58■□□□□ 0.72
SRRM1-207ENST00000468822 COLQQ9Y215 455 aaPredicted RBP19.58■□□□□ 0.72
SRRM1-207ENST00000468822 RIPOR2Q9Y4F9 1068 aa19.58■□□□□ 0.72
SRRM1-207ENST00000468822 SNCAIPQ9Y6H5 919 aa19.58■□□□□ 0.72
SRRM1-207ENST00000468822 SPDYE5A6NIY4 337 aa19.57■□□□□ 0.72
SRRM1-207ENST00000468822 FBXO33Q7Z6M2 555 aa19.57■□□□□ 0.72
SRRM1-207ENST00000468822 SH3TC2Q8TF17 1288 aa19.57■□□□□ 0.72
SRRM1-207ENST00000468822 BTBD19C9JJ37 291 aa19.56■□□□□ 0.72
SRRM1-207ENST00000468822 CHAF1AQ13111 956 aaPredicted RBP19.56■□□□□ 0.72
SRRM1-207ENST00000468822 ZKSCAN4Q969J2 545 aaPredicted RBP19.56■□□□□ 0.72
SRRM1-207ENST00000468822 RNF216Q9NWF9 866 aaPredicted RBP19.56■□□□□ 0.72
SRRM1-207ENST00000468822 C9orf78Q9NZ63 289 aaPredicted RBP19.56■□□□□ 0.72
SRRM1-207ENST00000468822 CSADQ9Y600 493 aa19.56■□□□□ 0.72
SRRM1-207ENST00000468822 NBPF7P0C2Y1 421 aaPredicted RBP19.55■□□□□ 0.72
SRRM1-207ENST00000468822 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
SRRM1-207ENST00000468822 IRF6O14896 467 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 TLR2O60603 784 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 ECM2O94769 699 aaPredicted RBP19.54■□□□□ 0.72
SRRM1-207ENST00000468822 CTGFP29279 349 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 TNNI2P48788 182 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 LACTBP83111 547 aaPredicted RBP19.54■□□□□ 0.72
SRRM1-207ENST00000468822 SLC4A8Q2Y0W8 1093 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 LRRC24Q50LG9 513 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 SLC4A10Q6U841 1118 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
SRRM1-207ENST00000468822 H0YGN5 161 aa19.53■□□□□ 0.72
SRRM1-207ENST00000468822 ALDH1L1O75891 902 aa19.53■□□□□ 0.72
SRRM1-207ENST00000468822 APOBEC3HQ6NTF7 200 aaKnown RBP19.53■□□□□ 0.72
SRRM1-207ENST00000468822 VGLL2Q8N8G2 317 aa19.53■□□□□ 0.72
SRRM1-207ENST00000468822 WRNIP1Q96S55 665 aa19.53■□□□□ 0.72
SRRM1-207ENST00000468822 CETPP11597 493 aa19.52■□□□□ 0.72
SRRM1-207ENST00000468822 HDLBPQ00341 1268 aaKnown RBP19.52■□□□□ 0.72
SRRM1-207ENST00000468822 ERO1BQ86YB8 467 aa19.52■□□□□ 0.72
SRRM1-207ENST00000468822 ANKRD44Q8N8A2 993 aa19.52■□□□□ 0.72
SRRM1-207ENST00000468822 TEKT1Q969V4 418 aa19.52■□□□□ 0.72
SRRM1-207ENST00000468822 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
SRRM1-207ENST00000468822 BICC1Q9H694 974 aaKnown RBP19.52■□□□□ 0.72
SRRM1-207ENST00000468822 LAMA3Q16787 3333 aa19.52■□□□□ 0.72
SRRM1-207ENST00000468822 MROH5Q6ZUA9 1318 aa19.51■□□□□ 0.71
SRRM1-207ENST00000468822 BCAMP50895 628 aa19.51■□□□□ 0.71
SRRM1-207ENST00000468822 ARHGEF6Q15052 776 aa19.51■□□□□ 0.71
SRRM1-207ENST00000468822 MTFR1Q15390 333 aa19.51■□□□□ 0.71
SRRM1-207ENST00000468822 SHISA4Q96DD7 197 aa19.51■□□□□ 0.71
SRRM1-207ENST00000468822 ZDHHC15Q96MV8 337 aa19.51■□□□□ 0.71
SRRM1-207ENST00000468822 UTYO14607 1347 aa19.51■□□□□ 0.71
SRRM1-207ENST00000468822 PPIL2Q13356 520 aa19.5■□□□□ 0.71
SRRM1-207ENST00000468822 SNAPC2Q13487 334 aa19.5■□□□□ 0.71
SRRM1-207ENST00000468822 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
SRRM1-207ENST00000468822 C17orf99Q6UX52 265 aa19.5■□□□□ 0.71
SRRM1-207ENST00000468822 MIGA2Q7L4E1 593 aa19.5■□□□□ 0.71
SRRM1-207ENST00000468822 FAM83AQ86UY5 434 aa19.5■□□□□ 0.71
SRRM1-207ENST00000468822 VPS37DQ86XT2 251 aa19.5■□□□□ 0.71
SRRM1-207ENST00000468822 KLHDC4Q8TBB5 520 aa19.5■□□□□ 0.71
SRRM1-207ENST00000468822 INPP5BP32019 993 aa19.49■□□□□ 0.71
SRRM1-207ENST00000468822 METTL24Q5JXM2 366 aa19.49■□□□□ 0.71
SRRM1-207ENST00000468822 TRIM47Q96LD4 638 aa19.49■□□□□ 0.71
SRRM1-207ENST00000468822 ZCCHC17Q9NP64 241 aaKnown RBP19.49■□□□□ 0.71
SRRM1-207ENST00000468822 CPA4Q9UI42 421 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms