RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 MYO5AQ9Y4I1 1855 aaKnown RBP13.66□□□□□ -0.22
MSH5-214ENST00000468602 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 HIP1O00291 1037 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 GOLIM4O00461 696 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 LDHBP07195 334 aaKnown RBP13.66□□□□□ -0.22
MSH5-214ENST00000468602 SDSP20132 328 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 MAP3K12Q12852 859 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 SLF2Q8IX21 1173 aa13.66□□□□□ -0.22
MSH5-214ENST00000468602 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.222e-14■■■□□ 18.4
MSH5-214ENST00000468602 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
MSH5-214ENST00000468602 AK9Q5TCS8 1911 aa13.65□□□□□ -0.22
MSH5-214ENST00000468602 RAD17O75943 681 aa13.65□□□□□ -0.22
MSH5-214ENST00000468602 PRDX5P30044 214 aa13.65□□□□□ -0.22
MSH5-214ENST00000468602 ADD2P35612 726 aa13.65□□□□□ -0.22
MSH5-214ENST00000468602 PPP4CP60510 307 aa13.65□□□□□ -0.22
MSH5-214ENST00000468602 GSTO1P78417 241 aa13.65□□□□□ -0.22
MSH5-214ENST00000468602 LDHCP07864 332 aa13.64□□□□□ -0.23
MSH5-214ENST00000468602 SCNN1DP51172 638 aa13.64□□□□□ -0.23
MSH5-214ENST00000468602 MECOMQ03112 1051 aa13.64□□□□□ -0.23
MSH5-214ENST00000468602 ZDHHC15Q96MV8 337 aa13.64□□□□□ -0.23
MSH5-214ENST00000468602 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
MSH5-214ENST00000468602 GPRC5DQ9NZD1 345 aa13.64□□□□□ -0.23
MSH5-214ENST00000468602 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
MSH5-214ENST00000468602 GPR75-ASB3A0A0A6YYF3 556 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
MSH5-214ENST00000468602 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
MSH5-214ENST00000468602 USP17L8P0C7I0 530 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 PDE6AP16499 860 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 RGS3P49796 1198 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
MSH5-214ENST00000468602 GRIK5Q16478 980 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 EDC3Q96F86 508 aaKnown RBP13.63□□□□□ -0.23
MSH5-214ENST00000468602 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 ABCF2Q9UG63 623 aa13.63□□□□□ -0.23
MSH5-214ENST00000468602 MYH2Q9UKX2 1941 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 EPB41L2O43491 1005 aaKnown RBP13.62□□□□□ -0.23
MSH5-214ENST00000468602 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 FKBP1CQ5VVH2 108 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 SKAP1Q86WV1 359 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 OGFOD1Q8N543 542 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 APPBP2Q92624 585 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
MSH5-214ENST00000468602 NDUFB9Q9Y6M9 179 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 MROH7-TTC4A0A0A0MT08 1334 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 RAD50Q92878 1312 aa13.62□□□□□ -0.23
MSH5-214ENST00000468602 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
MSH5-214ENST00000468602 CAPN15O75808 1086 aa13.61□□□□□ -0.23
MSH5-214ENST00000468602 IDH1O75874 414 aaKnown RBP13.61□□□□□ -0.23
MSH5-214ENST00000468602 CHMLP26374 656 aa13.61□□□□□ -0.23
MSH5-214ENST00000468602 GMPSP49915 693 aaPredicted RBP13.61□□□□□ -0.23
MSH5-214ENST00000468602 APOBEC3HQ6NTF7 200 aaKnown RBP13.61□□□□□ -0.23
MSH5-214ENST00000468602 TEKT1Q969V4 418 aa13.61□□□□□ -0.23
MSH5-214ENST00000468602 RIOK1Q9BRS2 568 aaKnown RBP13.61□□□□□ -0.23
MSH5-214ENST00000468602 FSD1Q9BTV5 496 aa13.61□□□□□ -0.23
MSH5-214ENST00000468602 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
MSH5-214ENST00000468602 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
MSH5-214ENST00000468602 ECM29Q5VYK3 1845 aa13.61□□□□□ -0.23
MSH5-214ENST00000468602 IQCA1LA6NCM1 817 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 TRIM6-TRIM34B2RNG4 842 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 POTECB2RU33 542 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
MSH5-214ENST00000468602 PLCG2P16885 1265 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 CRKP46108 304 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
MSH5-214ENST00000468602 DZIP1Q86YF9 867 aaKnown RBP13.6□□□□□ -0.23
MSH5-214ENST00000468602 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 MXD3Q9BW11 206 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 CNOT7Q9UIV1 285 aaKnown RBP13.6□□□□□ -0.23
MSH5-214ENST00000468602 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
MSH5-214ENST00000468602 DAGLAQ9Y4D2 1042 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 ZNF532Q9HCE3 1301 aa13.6□□□□□ -0.23
MSH5-214ENST00000468602 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 H7C1D1 291 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
MSH5-214ENST00000468602 CDC45O75419 566 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 RHBDL3P58872 404 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 USP50Q70EL3 339 aaPredicted RBP13.59□□□□□ -0.23
MSH5-214ENST00000468602 ADGRA1Q86SQ6 560 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
MSH5-214ENST00000468602 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 MYOZ2Q9NPC6 264 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 ADARB2Q9NS39 739 aaKnown RBP13.59□□□□□ -0.23
MSH5-214ENST00000468602 JAG2Q9Y219 1238 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
MSH5-214ENST00000468602 ZMYM6O95789 1325 aa13.59□□□□□ -0.23
MSH5-214ENST00000468602 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.23
MSH5-214ENST00000468602 FOCADQ5VW36 1801 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 BAG3O95817 575 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 GNAT2P19087 354 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 CFAP100Q494V2 611 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms