RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
COL4A6-205ENST00000468338 TTLL13PA6NNM8 815 aa13.89□□□□□ -0.19
COL4A6-205ENST00000468338 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-205ENST00000468338 GNAI2P04899 355 aa13.89□□□□□ -0.19
COL4A6-205ENST00000468338 SCARF1Q14162 830 aa13.89□□□□□ -0.19
COL4A6-205ENST00000468338 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
COL4A6-205ENST00000468338 RBM26Q5T8P6 1007 aaKnown RBP13.89□□□□□ -0.19
COL4A6-205ENST00000468338 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
COL4A6-205ENST00000468338 ASTN2O75129 1339 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-205ENST00000468338 PITPNM2Q9BZ72 1349 aa13.89□□□□□ -0.19
COL4A6-205ENST00000468338 WNT10BO00744 389 aa13.88□□□□□ -0.19
COL4A6-205ENST00000468338 ZBTB7BO15156 539 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-205ENST00000468338 SRGAP3O43295 1099 aa13.88□□□□□ -0.19
COL4A6-205ENST00000468338 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-205ENST00000468338 MLLT3P42568 568 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-205ENST00000468338 USP48Q86UV5 1035 aa13.88□□□□□ -0.19
COL4A6-205ENST00000468338 MTMR14Q8NCE2 650 aa13.88□□□□□ -0.19
COL4A6-205ENST00000468338 PA2G4Q9UQ80 394 aaKnown RBP13.88□□□□□ -0.19
COL4A6-205ENST00000468338 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
COL4A6-205ENST00000468338 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
COL4A6-205ENST00000468338 KRT26Q7Z3Y9 468 aa13.87□□□□□ -0.19
COL4A6-205ENST00000468338 KIAA0825Q8IV33 1275 aa13.87□□□□□ -0.19
COL4A6-205ENST00000468338 LPIN2Q92539 896 aa13.87□□□□□ -0.19
COL4A6-205ENST00000468338 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
COL4A6-205ENST00000468338 DCPSQ96C86 337 aaKnown RBP13.87□□□□□ -0.19
COL4A6-205ENST00000468338 GGA3Q9NZ52 723 aa13.87□□□□□ -0.19
COL4A6-205ENST00000468338 CEP126Q9P2H0 1117 aa13.87□□□□□ -0.19
COL4A6-205ENST00000468338 PNMA6EA0A0J9YXQ4 647 aa13.86□□□□□ -0.19
COL4A6-205ENST00000468338 BCAMP50895 628 aa13.86□□□□□ -0.19
COL4A6-205ENST00000468338 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
COL4A6-205ENST00000468338 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
COL4A6-205ENST00000468338 ANGEL2Q5VTE6 544 aaKnown RBP13.86□□□□□ -0.19
COL4A6-205ENST00000468338 FTSJ3Q8IY81 847 aaKnown RBP13.86□□□□□ -0.19
COL4A6-205ENST00000468338 SIL1Q9H173 461 aa13.86□□□□□ -0.19
COL4A6-205ENST00000468338 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
COL4A6-205ENST00000468338 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
COL4A6-205ENST00000468338 TLL2Q9Y6L7 1015 aa13.86□□□□□ -0.19
COL4A6-205ENST00000468338 CELF2O95319 508 aaKnown RBP13.85□□□□□ -0.19
COL4A6-205ENST00000468338 SLC5A1P13866 664 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 ATP8B2P98198 1209 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 DEFB115Q30KQ5 88 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 SAPCD2Q86UD0 394 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 SULF1Q8IWU6 871 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 SSH3Q8TE77 659 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 HHIPL1Q96JK4 782 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 RCAN3Q9UKA8 241 aa13.85□□□□□ -0.19
COL4A6-205ENST00000468338 ADM5C9JUS6 153 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 DPYSL4O14531 572 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 MS4A1P11836 297 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 VEGFBP49765 207 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 MFSD14BQ5SR56 506 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 ITPRIPQ8IWB1 547 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 JAG2Q9Y219 1238 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 ARAP2Q8WZ64 1704 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 PCNTO95613 3336 aa13.84□□□□□ -0.19
COL4A6-205ENST00000468338 ATP2B3Q16720 1220 aa13.83□□□□□ -0.2
COL4A6-205ENST00000468338 TBC1D22AQ8WUA7 517 aa13.83□□□□□ -0.2
COL4A6-205ENST00000468338 ABT1Q9ULW3 272 aaKnown RBP13.83□□□□□ -0.2
COL4A6-205ENST00000468338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-205ENST00000468338 HDLBPQ00341 1268 aaKnown RBP13.82□□□□□ -0.2
COL4A6-205ENST00000468338 DLGAP5Q15398 846 aa13.82□□□□□ -0.2
COL4A6-205ENST00000468338 GRIK5Q16478 980 aa13.82□□□□□ -0.2
COL4A6-205ENST00000468338 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
COL4A6-205ENST00000468338 PRMT6Q96LA8 375 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-205ENST00000468338 MRIQ9BWK5 157 aa13.82□□□□□ -0.2
COL4A6-205ENST00000468338 BMP2KQ9NSY1 1161 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-205ENST00000468338 SERPINA10Q9UK55 444 aa13.82□□□□□ -0.2
COL4A6-205ENST00000468338 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-205ENST00000468338 SUGT1Q9Y2Z0 365 aa13.82□□□□□ -0.2
COL4A6-205ENST00000468338 ECM29Q5VYK3 1845 aa13.82□□□□□ -0.2
COL4A6-205ENST00000468338 F8W031 263 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-205ENST00000468338 TIMM10P62072 90 aa13.81□□□□□ -0.2
COL4A6-205ENST00000468338 TFCP2Q12800 502 aa13.81□□□□□ -0.2
COL4A6-205ENST00000468338 DSG2Q14126 1118 aa13.81□□□□□ -0.2
COL4A6-205ENST00000468338 CFAP100Q494V2 611 aa13.81□□□□□ -0.2
COL4A6-205ENST00000468338 GBA2Q9HCG7 927 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-205ENST00000468338 TTF2Q9UNY4 1162 aaKnown RBP13.81□□□□□ -0.2
COL4A6-205ENST00000468338 NOP58Q9Y2X3 529 aaKnown RBP13.81□□□□□ -0.2
COL4A6-205ENST00000468338 PCDHAC2Q9Y5I4 1007 aa13.81□□□□□ -0.2
COL4A6-205ENST00000468338 WDR33Q9C0J8 1336 aaKnown RBP13.81□□□□□ -0.2
COL4A6-205ENST00000468338 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-205ENST00000468338 MYH13Q9UKX3 1938 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 THSD7BQ9C0I4 1608 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 ADORA1P30542 326 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 PHKA1P46020 1223 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
COL4A6-205ENST00000468338 APOBEC3FQ8IUX4 373 aaKnown RBP13.8□□□□□ -0.2
COL4A6-205ENST00000468338 CAPNS2Q96L46 248 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 AKAP2Q9Y2D5 859 aa13.8□□□□□ -0.2
COL4A6-205ENST00000468338 FRAT2O75474 233 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-205ENST00000468338 ECE1P42892 770 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 FKBP1BP68106 108 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms