RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
CDHR3-205ENST00000468143 FAM155AB1AL88 458 aaPredicted RBP14.29□□□□□ -0.12
CDHR3-205ENST00000468143 NF2P35240 595 aa14.29□□□□□ -0.12
CDHR3-205ENST00000468143 POLA2Q14181 598 aa14.29□□□□□ -0.12
CDHR3-205ENST00000468143 WDR66Q8TBY9 1149 aa14.29□□□□□ -0.12
CDHR3-205ENST00000468143 AKAP2Q9Y2D5 859 aa14.29□□□□□ -0.12
CDHR3-205ENST00000468143 COG6Q9Y2V7 657 aa14.29□□□□□ -0.12
CDHR3-205ENST00000468143 TCP10L2B9ZVM9 353 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 SURF6O75683 361 aaKnown RBP14.28□□□□□ -0.12
CDHR3-205ENST00000468143 COL1A1P02452 1464 aaPredicted RBP14.28□□□□□ -0.12
CDHR3-205ENST00000468143 FKBP1BP68106 108 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 KIF23Q02241 960 aaPredicted RBP14.28□□□□□ -0.12
CDHR3-205ENST00000468143 OS9Q13438 667 aaPredicted RBP14.28□□□□□ -0.12
CDHR3-205ENST00000468143 RASA3Q14644 834 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 SSH3Q8TE77 659 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 TEKT1Q969V4 418 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 CCDC102AQ96A19 550 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 TSKSQ9UJT2 592 aa14.28□□□□□ -0.12
CDHR3-205ENST00000468143 MS4A1P11836 297 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 PRDX5P30044 214 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.13
CDHR3-205ENST00000468143 LBX1P52954 281 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 CACNB3P54284 484 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 NOGQ13253 232 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 GORABQ5T7V8 394 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 NBPF12Q5TAG4 269 aaPredicted RBP14.27□□□□□ -0.13
CDHR3-205ENST00000468143 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
CDHR3-205ENST00000468143 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 DENND2AQ9ULE3 1009 aa14.27□□□□□ -0.13
CDHR3-205ENST00000468143 ANGEL1Q9UNK9 670 aaKnown RBP14.27□□□□□ -0.13
CDHR3-205ENST00000468143 SLC10A3P09131 477 aa14.26□□□□□ -0.13
CDHR3-205ENST00000468143 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
CDHR3-205ENST00000468143 MVPQ14764 893 aaKnown RBP14.26□□□□□ -0.13
CDHR3-205ENST00000468143 DIXDC1Q155Q3 683 aa14.26□□□□□ -0.13
CDHR3-205ENST00000468143 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
CDHR3-205ENST00000468143 ARMC9Q7Z3E5 817 aa14.26□□□□□ -0.13
CDHR3-205ENST00000468143 RASAL3Q86YV0 1011 aa14.26□□□□□ -0.13
CDHR3-205ENST00000468143 SUGT1Q9Y2Z0 365 aa14.26□□□□□ -0.13
CDHR3-205ENST00000468143 SEMA3EO15041 775 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 LDHBP07195 334 aaKnown RBP14.25□□□□□ -0.13
CDHR3-205ENST00000468143 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
CDHR3-205ENST00000468143 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
CDHR3-205ENST00000468143 RASGRF1Q13972 1273 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 C20orf194Q5TEA3 1177 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 APOBEC3HQ6NTF7 200 aaKnown RBP14.25□□□□□ -0.13
CDHR3-205ENST00000468143 CDAN1Q8IWY9 1227 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 ZDHHC15Q96MV8 337 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 MRIQ9BWK5 157 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 ABCF2Q9UG63 623 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 PPP2R3BQ9Y5P8 575 aa14.25□□□□□ -0.13
CDHR3-205ENST00000468143 MAST3O60307 1309 aa14.24□□□□□ -0.13
CDHR3-205ENST00000468143 SUPT20HL1Q3ZLR7 823 aa14.24□□□□□ -0.13
CDHR3-205ENST00000468143 HHIPL2Q6UWX4 724 aa14.24□□□□□ -0.13
CDHR3-205ENST00000468143 TMEM39BQ9GZU3 492 aa14.24□□□□□ -0.13
CDHR3-205ENST00000468143 SALL1Q9NSC2 1324 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 PPP1R12BO60237 982 aaPredicted RBP14.23□□□□□ -0.13
CDHR3-205ENST00000468143 TNNI2P48788 182 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 TNFAIP1Q13829 316 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 TNNI3KQ59H18 835 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 TBC1D9Q6ZT07 1266 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 TNS4Q8IZW8 715 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 TEPSINQ96N21 525 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 CSRNP1Q96S65 589 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 HMG20BQ9P0W2 317 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 DDX19BQ9UMR2 479 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 EXOC6BQ9Y2D4 811 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 NOP58Q9Y2X3 529 aaKnown RBP14.23□□□□□ -0.13
CDHR3-205ENST00000468143 DAGLAQ9Y4D2 1042 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 FPGT-TNNI3KV9GXZ4 949 aa14.23□□□□□ -0.13
CDHR3-205ENST00000468143 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 PAPPA2Q9BXP8 1791 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 USP2O75604 605 aaPredicted RBP14.22□□□□□ -0.13
CDHR3-205ENST00000468143 LDLRAD1Q5T700 205 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 SPATA5Q8NB90 893 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 CLMNQ96JQ2 1002 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
CDHR3-205ENST00000468143 SNRKQ9NRH2 765 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 ZBTB40Q9NUA8 1239 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 TMOD2Q9NZR1 351 aa14.22□□□□□ -0.13
CDHR3-205ENST00000468143 APBB1O00213 710 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 TTC39AQ5SRH9 613 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 CDC42EP5Q6NZY7 148 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.21□□□□□ -0.13
CDHR3-205ENST00000468143 SLC10A4Q96EP9 437 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 GPR108Q9NPR9 543 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 THSD7BQ9C0I4 1608 aa14.21□□□□□ -0.13
CDHR3-205ENST00000468143 TRPA1O75762 1119 aa14.2□□□□□ -0.14
CDHR3-205ENST00000468143 UQCRFS1P1P0C7P4 283 aa14.2□□□□□ -0.14
CDHR3-205ENST00000468143 ARID4AP29374 1257 aaPredicted RBP14.2□□□□□ -0.14
CDHR3-205ENST00000468143 MCAMP43121 646 aa14.2□□□□□ -0.14
CDHR3-205ENST00000468143 TCP10Q12799 353 aa14.2□□□□□ -0.14
CDHR3-205ENST00000468143 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
CDHR3-205ENST00000468143 CCDC158Q5M9N0 1113 aa14.2□□□□□ -0.14
CDHR3-205ENST00000468143 ERICH6Q7L0X2 663 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms