RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 GJD3Q8N144 294 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 GATA6Q92908 595 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 CYP4F12Q9HCS2 524 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 ATG3Q9NT62 314 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 AMOTL2Q9Y2J4 779 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 LEMD3Q9Y2U8 911 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 FAM170BA6NMN3 283 aa8.04□□□□□ -1.12
SMC4-207ENST00000467263 ECEL1O95672 775 aa8.04□□□□□ -1.12
SMC4-207ENST00000467263 FOSL1P15407 271 aa8.04□□□□□ -1.12
SMC4-207ENST00000467263 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
SMC4-207ENST00000467263 OSBPL1AQ9BXW6 950 aa8.04□□□□□ -1.12
SMC4-207ENST00000467263 A0A1W2PP55 124 aa8.03□□□□□ -1.12
SMC4-207ENST00000467263 FAM13AO94988 1023 aa8.03□□□□□ -1.12
SMC4-207ENST00000467263 USP11P51784 963 aa8.03□□□□□ -1.12
SMC4-207ENST00000467263 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
SMC4-207ENST00000467263 TCF12Q99081 682 aa8.03□□□□□ -1.12
SMC4-207ENST00000467263 CCDC39Q9UFE4 941 aa8.03□□□□□ -1.12
SMC4-207ENST00000467263 PRKAG2Q9UGJ0 569 aa8.03□□□□□ -1.12
SMC4-207ENST00000467263 ABL1P00519 1130 aa8.02□□□□□ -1.13
SMC4-207ENST00000467263 ADH5P11766 374 aa8.02□□□□□ -1.13
SMC4-207ENST00000467263 MAOBP27338 520 aa8.02□□□□□ -1.13
SMC4-207ENST00000467263 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMC4-207ENST00000467263 CCNJLQ8IV13 435 aa8.02□□□□□ -1.13
SMC4-207ENST00000467263 ACTL7BQ9Y614 415 aa8.02□□□□□ -1.13
SMC4-207ENST00000467263 A0A096LPE4 126 aa8.01□□□□□ -1.13
SMC4-207ENST00000467263 A0A1W2PPZ6 126 aa8.01□□□□□ -1.13
SMC4-207ENST00000467263 PCDH1Q08174 1060 aa8.01□□□□□ -1.13
SMC4-207ENST00000467263 PAOXQ6QHF9 649 aa8.01□□□□□ -1.13
SMC4-207ENST00000467263 EZH1Q92800 747 aaPredicted RBP8.01□□□□□ -1.13
SMC4-207ENST00000467263 TBC1D32Q96NH3 1257 aa8.01□□□□□ -1.13
SMC4-207ENST00000467263 TRIM56Q9BRZ2 755 aaKnown RBP8.01□□□□□ -1.13
SMC4-207ENST00000467263 NFICP08651 508 aa8□□□□□ -1.13
SMC4-207ENST00000467263 USP5P45974 858 aa8□□□□□ -1.13
SMC4-207ENST00000467263 EHHADHQ08426 723 aa8□□□□□ -1.13
SMC4-207ENST00000467263 PDE4CQ08493 712 aa8□□□□□ -1.13
SMC4-207ENST00000467263 ECM1Q16610 540 aa8□□□□□ -1.13
SMC4-207ENST00000467263 B4GALNT3Q6L9W6 998 aa8□□□□□ -1.13
SMC4-207ENST00000467263 ZAR1Q86SH2 424 aa8□□□□□ -1.13
SMC4-207ENST00000467263 DYNC1LI2O43237 492 aaPredicted RBP7.99□□□□□ -1.13
SMC4-207ENST00000467263 PRNPP04156 253 aa7.99□□□□□ -1.13
SMC4-207ENST00000467263 RAB6AP20340 208 aa7.99□□□□□ -1.13
SMC4-207ENST00000467263 GALNT12Q8IXK2 581 aa7.99□□□□□ -1.13
SMC4-207ENST00000467263 CLEC4MQ9H2X3 399 aaPredicted RBP7.99□□□□□ -1.13
SMC4-207ENST00000467263 LIN7BQ9HAP6 207 aa7.99□□□□□ -1.13
SMC4-207ENST00000467263 CYP26A1O43174 497 aa7.98□□□□□ -1.13
SMC4-207ENST00000467263 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
SMC4-207ENST00000467263 AKAP4Q5JQC9 854 aa7.98□□□□□ -1.13
SMC4-207ENST00000467263 CBLL1Q75N03 491 aa7.98□□□□□ -1.13
SMC4-207ENST00000467263 SEMA6CQ9H3T2 930 aa7.98□□□□□ -1.13
SMC4-207ENST00000467263 FAM105AQ9NUU6 356 aa7.98□□□□□ -1.13
SMC4-207ENST00000467263 ANGEL1Q9UNK9 670 aaKnown RBP7.98□□□□□ -1.13
SMC4-207ENST00000467263 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
SMC4-207ENST00000467263 SERPINB4P48594 390 aa7.97□□□□□ -1.13
SMC4-207ENST00000467263 POU4F3Q15319 338 aa7.97□□□□□ -1.13
SMC4-207ENST00000467263 ZNF765Q7L2R6 523 aa7.97□□□□□ -1.13
SMC4-207ENST00000467263 DYMQ7RTS9 669 aa7.97□□□□□ -1.13
SMC4-207ENST00000467263 GIMAP7Q8NHV1 300 aa7.97□□□□□ -1.13
SMC4-207ENST00000467263 ZC3H7BQ9UGR2 993 aaKnown RBP7.97□□□□□ -1.13
SMC4-207ENST00000467263 LGR6Q9HBX8 967 aa7.96□□□□□ -1.14
SMC4-207ENST00000467263 YBX3P16989 372 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMC4-207ENST00000467263 ORC1Q13415 861 aa7.95□□□□□ -1.14
SMC4-207ENST00000467263 CPSF6Q16630 551 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMC4-207ENST00000467263 VSIG10LQ86VR7 867 aa7.95□□□□□ -1.14
SMC4-207ENST00000467263 ACSS3Q9H6R3 686 aa7.95□□□□□ -1.14
SMC4-207ENST00000467263 LRRC4CQ9HCJ2 640 aa7.95□□□□□ -1.14
SMC4-207ENST00000467263 C1GALT1Q9NS00 363 aa7.95□□□□□ -1.14
SMC4-207ENST00000467263 SEZ6L2Q6UXD5 910 aa7.94□□□□□ -1.14
SMC4-207ENST00000467263 TP53INP2Q8IXH6 220 aa7.94□□□□□ -1.14
SMC4-207ENST00000467263 METTL22Q9BUU2 404 aaPredicted RBP7.94□□□□□ -1.14
SMC4-207ENST00000467263 ZNF576Q9H609 170 aa7.94□□□□□ -1.14
SMC4-207ENST00000467263 PAK6Q9NQU5 681 aaPredicted RBP7.94□□□□□ -1.14
SMC4-207ENST00000467263 AP4E1Q9UPM8 1137 aa7.94□□□□□ -1.14
SMC4-207ENST00000467263 ICMTO60725 284 aa7.93□□□□□ -1.14
SMC4-207ENST00000467263 B3GALT4O96024 378 aa7.93□□□□□ -1.14
SMC4-207ENST00000467263 CYP11A1P05108 521 aa7.93□□□□□ -1.14
SMC4-207ENST00000467263 TXNDC2Q86VQ3 553 aa7.93□□□□□ -1.14
SMC4-207ENST00000467263 WFDC3Q8IUB2 231 aa7.93□□□□□ -1.14
SMC4-207ENST00000467263 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
SMC4-207ENST00000467263 BSDC1Q9NW68 430 aaPredicted RBP7.93□□□□□ -1.14
SMC4-207ENST00000467263 PPP1R9AQ9ULJ8 1098 aa7.93□□□□□ -1.14
SMC4-207ENST00000467263 BRD1O95696 1058 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 ASPAP45381 313 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 ARHGAP4P98171 946 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 KIAA0319Q5VV43 1072 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 OGFOD2Q6N063 350 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 ZNF574Q6ZN55 896 aaPredicted RBP7.92□□□□□ -1.14
SMC4-207ENST00000467263 FLCNQ8NFG4 579 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
SMC4-207ENST00000467263 WDR18Q9BV38 432 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 NPHS2Q9NP85 383 aa7.92□□□□□ -1.14
SMC4-207ENST00000467263 ARID1BQ8NFD5 2236 aaPredicted RBP7.92□□□□□ -1.14
SMC4-207ENST00000467263 H3BRB1 525 aa7.91□□□□□ -1.14
SMC4-207ENST00000467263 AOC2O75106 756 aa7.91□□□□□ -1.14
SMC4-207ENST00000467263 ITPKAP23677 461 aa7.91□□□□□ -1.14
SMC4-207ENST00000467263 FBXL18Q96ME1 805 aa7.91□□□□□ -1.14
SMC4-207ENST00000467263 YIPF2Q9BWQ6 316 aa7.91□□□□□ -1.14
SMC4-207ENST00000467263 TUT1Q9H6E5 874 aaKnown RBP7.91□□□□□ -1.14
SMC4-207ENST00000467263 RAD18Q9NS91 495 aa7.91□□□□□ -1.14
SMC4-207ENST00000467263 DAGLAQ9Y4D2 1042 aa7.91□□□□□ -1.14
SMC4-207ENST00000467263 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms