RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 AFDNP55196 1824 aaKnown RBP20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 M0R2C6 588 aa20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 TTC31Q49AM3 519 aaPredicted RBP20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 CCDC93Q567U6 631 aa20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 OSBP2Q969R2 916 aa20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 CARD10Q9BWT7 1032 aa20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 DACT1Q9NYF0 836 aa20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 CEP126Q9P2H0 1117 aa20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNAPC3-205ENST00000467062 CCDC69A6NI79 296 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 GOLGA6L19H0YKK7 550 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 TPM1P09493 284 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 GUCY1B3Q02153 619 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 UBXN4Q92575 508 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 ARFGEF2Q9Y6D5 1785 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 MAST3O60307 1309 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 H3BQV1 296 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 OAS2P29728 719 aaKnown RBP20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 HLFQ16534 295 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 IFFO2Q5TF58 517 aa20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 RBM43Q6ZSC3 357 aaKnown RBP20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 SYTL4Q96C24 671 aaPredicted RBP20.89■□□□□ 0.93
SNAPC3-205ENST00000467062 COL5A2P05997 1499 aaPredicted RBP20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 GOLGA6L4A6NEF3 574 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 CCZ1BP86790 482 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 CCZ1P86791 482 aaPredicted RBP20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 NKX1-1Q15270 411 aaPredicted RBP20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 WASHC4Q2M389 1173 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 EXOC4Q96A65 974 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 TAOK2Q9UL54 1235 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 GLI3P10071 1580 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 ZMYM1Q5SVZ6 1142 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 RAB11FIP4Q86YS3 637 aa20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 ALDH8A1Q9H2A2 487 aaPredicted RBP20.88■□□□□ 0.93
SNAPC3-205ENST00000467062 PLEKHG2Q9H7P9 1386 aa20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 E7EWF7 191 aa20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 LEO1Q8WVC0 666 aaPredicted RBP20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 XAGE2Q96GT9 111 aa20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 DEF6Q9H4E7 631 aa20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 ORC3Q9UBD5 711 aaPredicted RBP20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 IVLP07476 585 aa20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 MAGEA9P43362 315 aa20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 ARID5BQ14865 1188 aa20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 DHX32Q7L7V1 743 aaKnown RBP20.87■□□□□ 0.93
SNAPC3-205ENST00000467062 SOS2Q07890 1332 aaPredicted RBP20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 PGBD1Q96JS3 809 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 ISCA1Q9BUE6 129 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 CLSTN2Q9H4D0 955 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 SH3TC1Q8TE82 1336 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 CTDNEP1O95476 244 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 TTC39AQ5SRH9 613 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 DNAJC25Q9H1X3 360 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 BTG4Q9NY30 223 aa20.86■□□□□ 0.93
SNAPC3-205ENST00000467062 A0A0G2JS52 829 aa20.85■□□□□ 0.93
SNAPC3-205ENST00000467062 NR1I2O75469 434 aa20.85■□□□□ 0.93
SNAPC3-205ENST00000467062 SMC1AQ14683 1233 aaKnown RBP20.85■□□□□ 0.93
SNAPC3-205ENST00000467062 HELLSQ9NRZ9 838 aa20.85■□□□□ 0.93
SNAPC3-205ENST00000467062 ACTN2P35609 894 aa20.85■□□□□ 0.93
SNAPC3-205ENST00000467062 ZAP70P43403 619 aa20.85■□□□□ 0.93
SNAPC3-205ENST00000467062 GSDMDP57764 484 aa20.85■□□□□ 0.93
SNAPC3-205ENST00000467062 KAT6BQ8WYB5 2073 aa20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 BICD2Q8TD16 824 aa20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 TOMM22Q9NS69 142 aa20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 KCPQ6ZWJ8 1503 aa20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 MYCNP04198 464 aaPredicted RBP20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 ATP2B1P20020 1258 aa20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 SRRTQ9BXP5 876 aaKnown RBP20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 PUS7LQ9H0K6 701 aaKnown RBP20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 PKD1L3Q7Z443 1732 aa20.84■□□□□ 0.93
SNAPC3-205ENST00000467062 CCDC158Q5M9N0 1113 aa20.83■□□□□ 0.93
SNAPC3-205ENST00000467062 LEKR1Q6ZMV7 388 aa20.83■□□□□ 0.93
SNAPC3-205ENST00000467062 NSUN7Q8NE18 718 aaKnown RBP20.83■□□□□ 0.93
SNAPC3-205ENST00000467062 GPR108Q9NPR9 543 aa20.83■□□□□ 0.93
SNAPC3-205ENST00000467062 PTPDC1A2A3K4 754 aa20.83■□□□□ 0.92
SNAPC3-205ENST00000467062 RESTQ13127 1097 aa20.83■□□□□ 0.92
SNAPC3-205ENST00000467062 DRC1Q96MC2 740 aa20.83■□□□□ 0.92
SNAPC3-205ENST00000467062 DSCC1Q9BVC3 393 aa20.83■□□□□ 0.92
SNAPC3-205ENST00000467062 SCAND2PQ9GZW5 306 aaPredicted RBP20.83■□□□□ 0.92
SNAPC3-205ENST00000467062 GREM2Q9H772 168 aa20.83■□□□□ 0.92
SNAPC3-205ENST00000467062 ZCCHC17Q9NP64 241 aaKnown RBP20.83■□□□□ 0.92
SNAPC3-205ENST00000467062 PALLDQ8WX93 1383 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 FOXP2O15409 715 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 EXOSC10Q01780 885 aaKnown RBP20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 IFIT5Q13325 482 aaKnown RBP20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 OTUD7BQ6GQQ9 843 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 REXO1L1PQ8IX06 675 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 LRRN4CLQ8ND94 238 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 MNS1Q8NEH6 495 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 SLC4A9Q96Q91 983 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 PSDA5PKW4 1024 aaPredicted RBP20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 LMAN1P49257 510 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 KIF6Q6ZMV9 814 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 GPATCH11Q8N954 259 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 CEP83Q9Y592 693 aa20.82■□□□□ 0.92
SNAPC3-205ENST00000467062 A0A087WWV3 80 aa20.81■□□□□ 0.92
SNAPC3-205ENST00000467062 PFKFB2O60825 505 aa20.81■□□□□ 0.92
SNAPC3-205ENST00000467062 CCDC172P0C7W6 258 aa20.81■□□□□ 0.92
SNAPC3-205ENST00000467062 DENND2AQ9ULE3 1009 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms