RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
C9orf135-202ENST00000466872 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
C9orf135-202ENST00000466872 RFX5P48382 616 aaPredicted RBP12.17□□□□□ -0.46
C9orf135-202ENST00000466872 SLC4A3P48751 1232 aa12.17□□□□□ -0.46
C9orf135-202ENST00000466872 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
C9orf135-202ENST00000466872 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
C9orf135-202ENST00000466872 LARGE2Q8N3Y3 721 aa12.17□□□□□ -0.46
C9orf135-202ENST00000466872 SUPT20HQ8NEM7 779 aa12.17□□□□□ -0.46
C9orf135-202ENST00000466872 RRAGCQ9HB90 399 aa12.17□□□□□ -0.46
C9orf135-202ENST00000466872 NSFL1CQ9UNZ2 370 aaKnown RBP12.17□□□□□ -0.46
C9orf135-202ENST00000466872 RNF40O75150 1001 aa12.16□□□□□ -0.46
C9orf135-202ENST00000466872 RLBP1P12271 317 aa12.16□□□□□ -0.46
C9orf135-202ENST00000466872 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
C9orf135-202ENST00000466872 MEIS3Q99687 375 aa12.16□□□□□ -0.46
C9orf135-202ENST00000466872 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
C9orf135-202ENST00000466872 ARAP2Q8WZ64 1704 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 ANKRD18BA2A2Z9 1011 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 SLC10A3P09131 477 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 KLRK1P26718 216 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 SCNN1DP51172 638 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 C1QTNF8P60827 252 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 CXCL9Q07325 125 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 TXNRD3Q86VQ6 643 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 GPC2Q8N158 579 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 ZNRF3Q9ULT6 936 aa12.15□□□□□ -0.46
C9orf135-202ENST00000466872 SNAP23O00161 211 aa12.14□□□□□ -0.47
C9orf135-202ENST00000466872 UFL1O94874 794 aa12.14□□□□□ -0.47
C9orf135-202ENST00000466872 CHRNDQ07001 517 aa12.14□□□□□ -0.47
C9orf135-202ENST00000466872 IFIT5Q13325 482 aaKnown RBP12.14□□□□□ -0.47
C9orf135-202ENST00000466872 NIM1KQ8IY84 436 aa12.14□□□□□ -0.47
C9orf135-202ENST00000466872 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
C9orf135-202ENST00000466872 PUS3Q9BZE2 481 aaKnown RBP12.14□□□□□ -0.47
C9orf135-202ENST00000466872 KCNQ5Q9NR82 932 aa12.14□□□□□ -0.47
C9orf135-202ENST00000466872 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
C9orf135-202ENST00000466872 TOMM70O94826 608 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
C9orf135-202ENST00000466872 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 IGHMBP2P38935 993 aaKnown RBP12.13□□□□□ -0.47
C9orf135-202ENST00000466872 APLP1P51693 650 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 C15orf52Q6ZUT6 534 aaKnown RBP12.13□□□□□ -0.47
C9orf135-202ENST00000466872 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
C9orf135-202ENST00000466872 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
C9orf135-202ENST00000466872 ECE2O60344 883 aa12.12□□□□□ -0.47
C9orf135-202ENST00000466872 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
C9orf135-202ENST00000466872 MTX1Q13505 466 aa12.12□□□□□ -0.47
C9orf135-202ENST00000466872 KLHDC4Q8TBB5 520 aa12.12□□□□□ -0.47
C9orf135-202ENST00000466872 EYA3Q99504 573 aa12.12□□□□□ -0.47
C9orf135-202ENST00000466872 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
C9orf135-202ENST00000466872 TAF1DQ9H5J8 278 aaPredicted RBP12.12□□□□□ -0.47
C9orf135-202ENST00000466872 SLC24A3Q9HC58 644 aa12.12□□□□□ -0.47
C9orf135-202ENST00000466872 ANKIB1Q9P2G1 1089 aa12.12□□□□□ -0.47
C9orf135-202ENST00000466872 IPO8O15397 1037 aaKnown RBP12.11□□□□□ -0.47
C9orf135-202ENST00000466872 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
C9orf135-202ENST00000466872 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
C9orf135-202ENST00000466872 AMHR2Q16671 573 aa12.11□□□□□ -0.47
C9orf135-202ENST00000466872 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
C9orf135-202ENST00000466872 LRRC24Q50LG9 513 aa12.11□□□□□ -0.47
C9orf135-202ENST00000466872 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
C9orf135-202ENST00000466872 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
C9orf135-202ENST00000466872 LEMD3Q9Y2U8 911 aa12.11□□□□□ -0.47
C9orf135-202ENST00000466872 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
C9orf135-202ENST00000466872 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
C9orf135-202ENST00000466872 ZNF804BA4D1E1 1349 aa12.11□□□□□ -0.47
C9orf135-202ENST00000466872 MYH13Q9UKX3 1938 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 SHTN1A0MZ66 631 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 PSMD14O00487 310 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 TRIM66O15016 1216 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 TAF5LO75529 589 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 RAD17O75943 681 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
C9orf135-202ENST00000466872 EPS15P42566 896 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 CIAPIN1Q6FI81 312 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 HELBQ8NG08 1087 aaPredicted RBP12.1□□□□□ -0.47
C9orf135-202ENST00000466872 GMLQ99445 158 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 MPHOSPH8Q99549 860 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 ANKRD2Q9GZV1 360 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 GPRC5DQ9NZD1 345 aa12.1□□□□□ -0.47
C9orf135-202ENST00000466872 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
C9orf135-202ENST00000466872 VIL1P09327 827 aaKnown RBP12.09□□□□□ -0.47
C9orf135-202ENST00000466872 GMPSP49915 693 aaPredicted RBP12.09□□□□□ -0.47
C9orf135-202ENST00000466872 LDHAL6AQ6ZMR3 332 aa12.09□□□□□ -0.47
C9orf135-202ENST00000466872 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
C9orf135-202ENST00000466872 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
C9orf135-202ENST00000466872 HACL1Q9UJ83 578 aa12.09□□□□□ -0.47
C9orf135-202ENST00000466872 GJA3Q9Y6H8 435 aa12.09□□□□□ -0.47
C9orf135-202ENST00000466872 TRPM7Q96QT4 1865 aa12.08□□□□□ -0.48
C9orf135-202ENST00000466872 IQCA1LA6NCM1 817 aa12.08□□□□□ -0.48
C9orf135-202ENST00000466872 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
C9orf135-202ENST00000466872 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
C9orf135-202ENST00000466872 FGFR2P21802 821 aa12.08□□□□□ -0.48
C9orf135-202ENST00000466872 EPHX2P34913 555 aa12.08□□□□□ -0.48
C9orf135-202ENST00000466872 CLCN1P35523 988 aa12.08□□□□□ -0.48
C9orf135-202ENST00000466872 FSTL1Q12841 308 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms