RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 HMG20BQ9P0W2 317 aa28.57■■■□□ 2.16
SUMO3-205ENST00000466861 LDHBP07195 334 aaKnown RBP28.56■■■□□ 2.16
SUMO3-205ENST00000466861 CRKP46108 304 aa28.56■■■□□ 2.16
SUMO3-205ENST00000466861 ANGEL2Q5VTE6 544 aaKnown RBP28.56■■■□□ 2.16
SUMO3-205ENST00000466861 HHIPL2Q6UWX4 724 aa28.56■■■□□ 2.16
SUMO3-205ENST00000466861 APOBEC3FQ8IUX4 373 aaKnown RBP28.56■■■□□ 2.16
SUMO3-205ENST00000466861 TEKT1Q969V4 418 aa28.56■■■□□ 2.16
SUMO3-205ENST00000466861 CCDC8Q9H0W5 538 aaPredicted RBP28.56■■■□□ 2.16
SUMO3-205ENST00000466861 GRIK5Q16478 980 aa28.55■■■□□ 2.16
SUMO3-205ENST00000466861 GLIS2Q9BZE0 524 aaPredicted RBP28.55■■■□□ 2.16
SUMO3-205ENST00000466861 CREBZFQ9NS37 354 aa28.55■■■□□ 2.16
SUMO3-205ENST00000466861 MCAMP43121 646 aa28.54■■■□□ 2.16
SUMO3-205ENST00000466861 ZDHHC15Q96MV8 337 aa28.54■■■□□ 2.16
SUMO3-205ENST00000466861 ASTN2O75129 1339 aaPredicted RBP28.53■■■□□ 2.16
SUMO3-205ENST00000466861 TMEM88BA6NKF7 163 aa28.53■■■□□ 2.16
SUMO3-205ENST00000466861 IFIT2P09913 472 aaKnown RBP28.53■■■□□ 2.16
SUMO3-205ENST00000466861 RBM5P52756 815 aaKnown RBP eCLIP28.53■■■□□ 2.16
SUMO3-205ENST00000466861 USP48Q86UV5 1035 aa28.53■■■□□ 2.16
SUMO3-205ENST00000466861 PRMT6Q96LA8 375 aaPredicted RBP28.53■■■□□ 2.16
SUMO3-205ENST00000466861 TLR7Q9NYK1 1049 aaKnown RBP28.53■■■□□ 2.16
SUMO3-205ENST00000466861 APBB1O00213 710 aa28.52■■■□□ 2.16
SUMO3-205ENST00000466861 PRDX5P30044 214 aa28.52■■■□□ 2.16
SUMO3-205ENST00000466861 SLF2Q8IX21 1173 aa28.52■■■□□ 2.16
SUMO3-205ENST00000466861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.52■■■□□ 2.16
SUMO3-205ENST00000466861 EXOC6Q8TAG9 804 aa28.51■■■□□ 2.15
SUMO3-205ENST00000466861 ABCF2Q9UG63 623 aa28.51■■■□□ 2.15
SUMO3-205ENST00000466861 TRAF5O00463 557 aa28.5■■■□□ 2.15
SUMO3-205ENST00000466861 ERICH6Q7L0X2 663 aa28.5■■■□□ 2.15
SUMO3-205ENST00000466861 GCC1Q96CN9 775 aa28.5■■■□□ 2.15
SUMO3-205ENST00000466861 FAM163AQ96GL9 167 aaPredicted RBP28.5■■■□□ 2.15
SUMO3-205ENST00000466861 PPP2R3BQ9Y5P8 575 aa28.5■■■□□ 2.15
SUMO3-205ENST00000466861 SPDYE2Q495Y8 402 aa28.49■■■□□ 2.15
SUMO3-205ENST00000466861 MYH2Q9UKX2 1941 aa28.49■■■□□ 2.15
SUMO3-205ENST00000466861 TNFAIP1Q13829 316 aa28.48■■■□□ 2.15
SUMO3-205ENST00000466861 TMED8Q6PL24 325 aaPredicted RBP28.48■■■□□ 2.15
SUMO3-205ENST00000466861 ADM5C9JUS6 153 aa28.47■■■□□ 2.15
SUMO3-205ENST00000466861 FKBP1CQ5VVH2 108 aa28.47■■■□□ 2.15
SUMO3-205ENST00000466861 DZIP1Q86YF9 867 aaKnown RBP28.47■■■□□ 2.15
SUMO3-205ENST00000466861 RWDD1Q9H446 243 aaPredicted RBP28.47■■■□□ 2.15
SUMO3-205ENST00000466861 PCDHAC2Q9Y5I4 1007 aa28.47■■■□□ 2.15
SUMO3-205ENST00000466861 GSTO1P78417 241 aa28.46■■■□□ 2.15
SUMO3-205ENST00000466861 CST9Q5W186 159 aa28.46■■■□□ 2.15
SUMO3-205ENST00000466861 APOBEC3HQ6NTF7 200 aaKnown RBP28.46■■■□□ 2.15
SUMO3-205ENST00000466861 PI16Q6UXB8 463 aa28.46■■■□□ 2.15
SUMO3-205ENST00000466861 ZNF70Q9UC06 446 aaPredicted RBP28.46■■■□□ 2.15
SUMO3-205ENST00000466861 GAKO14976 1311 aa28.45■■■□□ 2.15
SUMO3-205ENST00000466861 CELF2O95319 508 aaKnown RBP28.45■■■□□ 2.14
SUMO3-205ENST00000466861 LDHCP07864 332 aa28.45■■■□□ 2.14
SUMO3-205ENST00000466861 CDCA5Q96FF9 252 aa28.45■■■□□ 2.14
SUMO3-205ENST00000466861 TDRD3Q9H7E2 651 aaKnown RBP28.45■■■□□ 2.14
SUMO3-205ENST00000466861 DAGLAQ9Y4D2 1042 aa28.45■■■□□ 2.14
SUMO3-205ENST00000466861 CYP2E1P05181 493 aaPredicted RBP28.44■■■□□ 2.14
SUMO3-205ENST00000466861 ZAP70P43403 619 aa28.44■■■□□ 2.14
SUMO3-205ENST00000466861 LRP2BPQ9P2M1 347 aa28.44■■■□□ 2.14
SUMO3-205ENST00000466861 ATP5JP18859 108 aa28.43■■■□□ 2.14
SUMO3-205ENST00000466861 FKBP1BP68106 108 aa28.43■■■□□ 2.14
SUMO3-205ENST00000466861 FMR1Q06787 632 aaKnown RBP eCLIP28.43■■■□□ 2.14
SUMO3-205ENST00000466861 DEFB129Q9H1M3 183 aa28.43■■■□□ 2.14
SUMO3-205ENST00000466861 SNRKQ9NRH2 765 aa28.43■■■□□ 2.14
SUMO3-205ENST00000466861 TMOD2Q9NZR1 351 aa28.43■■■□□ 2.14
SUMO3-205ENST00000466861 CLRN2A0PK11 232 aa28.42■■■□□ 2.14
SUMO3-205ENST00000466861 MAP4K4O95819 1239 aaPredicted RBP28.42■■■□□ 2.14
SUMO3-205ENST00000466861 TNNI2P48788 182 aa28.42■■■□□ 2.14
SUMO3-205ENST00000466861 MECOMQ03112 1051 aa28.42■■■□□ 2.14
SUMO3-205ENST00000466861 TTF1Q15361 905 aaPredicted RBP28.42■■■□□ 2.14
SUMO3-205ENST00000466861 DIXDC1Q155Q3 683 aa28.42■■■□□ 2.14
SUMO3-205ENST00000466861 TBC1D9Q6ZT07 1266 aa28.42■■■□□ 2.14
SUMO3-205ENST00000466861 NSUN4Q96CB9 384 aaKnown RBP28.42■■■□□ 2.14
SUMO3-205ENST00000466861 MAST2Q6P0Q8 1798 aa28.42■■■□□ 2.14
SUMO3-205ENST00000466861 SMARCA5O60264 1052 aaPredicted RBP28.41■■■□□ 2.14
SUMO3-205ENST00000466861 NF2P35240 595 aa28.41■■■□□ 2.14
SUMO3-205ENST00000466861 GPATCH3Q96I76 525 aa28.41■■■□□ 2.14
SUMO3-205ENST00000466861 HHIPL1Q96JK4 782 aa28.41■■■□□ 2.14
SUMO3-205ENST00000466861 VEZTQ9HBM0 779 aa28.41■■■□□ 2.14
SUMO3-205ENST00000466861 RAI14Q9P0K7 980 aa28.41■■■□□ 2.14
SUMO3-205ENST00000466861 ZBTB47Q9UFB7 747 aaPredicted RBP28.41■■■□□ 2.14
SUMO3-205ENST00000466861 TLL2Q9Y6L7 1015 aa28.41■■■□□ 2.14
SUMO3-205ENST00000466861 MROH7-TTC4A0A0A0MT08 1334 aa28.41■■■□□ 2.14
SUMO3-205ENST00000466861 FAM83AQ86UY5 434 aa28.4■■■□□ 2.14
SUMO3-205ENST00000466861 SMC5Q8IY18 1101 aa28.4■■■□□ 2.14
SUMO3-205ENST00000466861 DNAJC5GQ8N7S2 189 aa28.4■■■□□ 2.14
SUMO3-205ENST00000466861 C2orf69Q8N8R5 385 aa28.4■■■□□ 2.14
SUMO3-205ENST00000466861 DOCK2Q92608 1830 aa28.4■■■□□ 2.14
SUMO3-205ENST00000466861 AOX1Q06278 1338 aa28.4■■■□□ 2.14
SUMO3-205ENST00000466861 RASSF10A6NK89 507 aa28.39■■■□□ 2.14
SUMO3-205ENST00000466861 GBA2Q9HCG7 927 aaPredicted RBP28.39■■■□□ 2.14
SUMO3-205ENST00000466861 ECHDC1Q9NTX5 307 aa28.39■■■□□ 2.14
SUMO3-205ENST00000466861 MYO5AQ9Y4I1 1855 aaKnown RBP28.38■■■□□ 2.13
SUMO3-205ENST00000466861 PAPPA2Q9BXP8 1791 aa28.38■■■□□ 2.13
SUMO3-205ENST00000466861 GPR75-ASB3A0A0A6YYF3 556 aa28.38■■■□□ 2.13
SUMO3-205ENST00000466861 SUPT20HL1Q3ZLR7 823 aa28.38■■■□□ 2.13
SUMO3-205ENST00000466861 SAPCD2Q86UD0 394 aa28.38■■■□□ 2.13
SUMO3-205ENST00000466861 ZNF384Q8TF68 577 aa28.38■■■□□ 2.13
SUMO3-205ENST00000466861 ZNF408Q9H9D4 720 aa28.38■■■□□ 2.13
SUMO3-205ENST00000466861 RASA3Q14644 834 aa28.37■■■□□ 2.13
SUMO3-205ENST00000466861 CDC42EP5Q6NZY7 148 aa28.37■■■□□ 2.13
SUMO3-205ENST00000466861 PIH1D3Q9NQM4 214 aaKnown RBP28.37■■■□□ 2.13
SUMO3-205ENST00000466861 ABT1Q9ULW3 272 aaKnown RBP28.37■■■□□ 2.13
SUMO3-205ENST00000466861 CNTNAP1P78357 1384 aa28.37■■■□□ 2.13
SUMO3-205ENST00000466861 HTRA3P83110 453 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms