RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 ZNF326Q5BKZ1 582 aaKnown RBP6.87□□□□□ -1.31
CALD1-214ENST00000466704 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.87□□□□□ -1.31
CALD1-214ENST00000466704 AGGF1Q8N302 714 aaeCLIP6.87□□□□□ -1.312e-7■■■□□ 17.5
CALD1-214ENST00000466704 UBASH3BQ8TF42 649 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 WFDC12Q8WWY7 111 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 BCL11AQ9H165 835 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 RNF19AQ9NV58 838 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
CALD1-214ENST00000466704 ALX3O95076 343 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 CYP11A1P05108 521 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
CALD1-214ENST00000466704 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 FAAP100Q0VG06 881 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 TMEM130Q8N3G9 435 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 GIPC2Q8TF65 315 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 RUSC1Q9BVN2 902 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 AK5Q9Y6K8 562 aa6.86□□□□□ -1.31
CALD1-214ENST00000466704 NOS3P29474 1203 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 ITGAEP38570 1179 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 POU4F3Q15319 338 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 TPTE2Q6XPS3 522 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 FAM161BQ96MY7 647 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 CORO1BQ9BR76 489 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 RNF208Q9H0X6 261 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 TMEM39AQ9NV64 488 aa6.85□□□□□ -1.31
CALD1-214ENST00000466704 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
CALD1-214ENST00000466704 LOC100289279A0A1B0GTE1 492 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 SORBS3O60504 671 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 GLB1P16278 677 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 DAB2P98082 770 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 AP3B2Q13367 1082 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 HP1BP3Q5SSJ5 553 aaPredicted RBP6.84□□□□□ -1.31
CALD1-214ENST00000466704 C3orf58Q8NDZ4 430 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 CEP44Q9C0F1 390 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 PPM1HQ9ULR3 514 aa6.84□□□□□ -1.31
CALD1-214ENST00000466704 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
CALD1-214ENST00000466704 FBXO24O75426 580 aa6.83□□□□□ -1.32
CALD1-214ENST00000466704 MAOBP27338 520 aa6.83□□□□□ -1.32
CALD1-214ENST00000466704 KIAA1211Q6ZU35 1233 aa6.83□□□□□ -1.32
CALD1-214ENST00000466704 TMC4Q7Z404 712 aa6.83□□□□□ -1.32
CALD1-214ENST00000466704 Q8N3U1 123 aa6.83□□□□□ -1.32
CALD1-214ENST00000466704 CEP41Q9BYV8 373 aa6.83□□□□□ -1.32
CALD1-214ENST00000466704 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
CALD1-214ENST00000466704 SART1O43290 800 aaKnown RBP6.82□□□□□ -1.32
CALD1-214ENST00000466704 DOC2BQ14184 412 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 PDE3AQ14432 1141 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 EXOSC6Q5RKV6 272 aaKnown RBP6.82□□□□□ -1.32
CALD1-214ENST00000466704 NUTM2GQ5VZR2 741 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 TP53INP1Q96A56 240 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 TRIM56Q9BRZ2 755 aaKnown RBP6.82□□□□□ -1.32
CALD1-214ENST00000466704 CYP4F12Q9HCS2 524 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 VTI1BQ9UEU0 232 aa6.82□□□□□ -1.32
CALD1-214ENST00000466704 HNRNPUQ00839 825 aaKnown RBP eCLIP6.81□□□□□ -1.32
CALD1-214ENST00000466704 SULF2Q8IWU5 870 aa6.81□□□□□ -1.32
CALD1-214ENST00000466704 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
CALD1-214ENST00000466704 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
CALD1-214ENST00000466704 NRSN2Q9GZP1 204 aa6.81□□□□□ -1.32
CALD1-214ENST00000466704 CBX8Q9HC52 389 aa6.81□□□□□ -1.32
CALD1-214ENST00000466704 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
CALD1-214ENST00000466704 RAD18Q9NS91 495 aa6.81□□□□□ -1.32
CALD1-214ENST00000466704 SAMM50Q9Y512 469 aa6.81□□□□□ -1.32
CALD1-214ENST00000466704 ECEL1O95672 775 aa6.8□□□□□ -1.32
CALD1-214ENST00000466704 ANKRD34AQ69YU3 496 aa6.8□□□□□ -1.32
CALD1-214ENST00000466704 KCNB2Q92953 911 aa6.8□□□□□ -1.32
CALD1-214ENST00000466704 PSMG3-AS1Q96PY0 264 aa6.8□□□□□ -1.32
CALD1-214ENST00000466704 EMILIN2Q9BXX0 1053 aa6.8□□□□□ -1.32
CALD1-214ENST00000466704 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
CALD1-214ENST00000466704 MEGF11A6BM72 1044 aa6.79□□□□□ -1.32
CALD1-214ENST00000466704 DLGAP3O95886 979 aa6.79□□□□□ -1.32
CALD1-214ENST00000466704 CTSBP07858 339 aa6.79□□□□□ -1.32
CALD1-214ENST00000466704 GSTP1P09211 210 aaKnown RBP6.79□□□□□ -1.32
CALD1-214ENST00000466704 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
CALD1-214ENST00000466704 NME2P22392 152 aa6.79□□□□□ -1.32
CALD1-214ENST00000466704 Q6ZS46 218 aa6.79□□□□□ -1.32
CALD1-214ENST00000466704 DZIP1LQ8IYY4 767 aaKnown RBP6.79□□□□□ -1.32
CALD1-214ENST00000466704 C12orf50Q8NA57 414 aaPredicted RBP6.79□□□□□ -1.32
CALD1-214ENST00000466704 ANKRD24Q8TF21 1146 aa6.79□□□□□ -1.32
CALD1-214ENST00000466704 TMPRSS13Q9BYE2 586 aa6.79□□□□□ -1.32
CALD1-214ENST00000466704 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
CALD1-214ENST00000466704 ENC1O14682 589 aa6.78□□□□□ -1.32
CALD1-214ENST00000466704 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
CALD1-214ENST00000466704 CELA3AP09093 270 aa6.78□□□□□ -1.32
CALD1-214ENST00000466704 CCDC85BQ15834 202 aaPredicted RBP6.78□□□□□ -1.32
CALD1-214ENST00000466704 MEI1Q5TIA1 1274 aa6.78□□□□□ -1.32
CALD1-214ENST00000466704 SV2BQ7L1I2 683 aa6.78□□□□□ -1.32
CALD1-214ENST00000466704 UTP4Q969X6 686 aaKnown RBP6.78□□□□□ -1.32
CALD1-214ENST00000466704 CRELD1Q96HD1 420 aa6.78□□□□□ -1.32
CALD1-214ENST00000466704 UBL7Q96S82 380 aaPredicted RBP6.78□□□□□ -1.32
CALD1-214ENST00000466704 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
CALD1-214ENST00000466704 PAGE1O75459 146 aa6.77□□□□□ -1.33
CALD1-214ENST00000466704 ARNTP27540 789 aa6.77□□□□□ -1.33
CALD1-214ENST00000466704 TAF1CQ15572 869 aaPredicted RBP6.77□□□□□ -1.33
CALD1-214ENST00000466704 UVSSAQ2YD98 709 aa6.77□□□□□ -1.33
CALD1-214ENST00000466704 AKAP4Q5JQC9 854 aa6.77□□□□□ -1.33
CALD1-214ENST00000466704 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
CALD1-214ENST00000466704 SUGCTQ9HAC7 445 aa6.77□□□□□ -1.33
CALD1-214ENST00000466704 PODXL2Q9NZ53 605 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms