RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 SBF1O95248 1867 aa8.13□□□□□ -1.11
SEC22A-202ENST00000466519 FAM177BA6PVY3 158 aa8.12□□□□□ -1.11
SEC22A-202ENST00000466519 U2SURPO15042 1029 aaKnown RBP8.12□□□□□ -1.11
SEC22A-202ENST00000466519 GRM5P41594 1212 aa8.12□□□□□ -1.11
SEC22A-202ENST00000466519 ECE1P42892 770 aa8.12□□□□□ -1.11
SEC22A-202ENST00000466519 RGS19P49795 217 aa8.12□□□□□ -1.11
SEC22A-202ENST00000466519 FMR1Q06787 632 aaKnown RBP eCLIP8.12□□□□□ -1.11
SEC22A-202ENST00000466519 GRM1Q13255 1194 aa8.12□□□□□ -1.11
SEC22A-202ENST00000466519 CAPNS2Q96L46 248 aa8.12□□□□□ -1.11
SEC22A-202ENST00000466519 NIP7Q9Y221 180 aaKnown RBP eCLIP8.12□□□□□ -1.11
SEC22A-202ENST00000466519 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
SEC22A-202ENST00000466519 PRAMEF22A3QJZ6 481 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 CAPN5O15484 640 aaPredicted RBP8.11□□□□□ -1.11
SEC22A-202ENST00000466519 GPR37L1O60883 481 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 SNRPA1P09661 255 aaKnown RBP8.11□□□□□ -1.11
SEC22A-202ENST00000466519 FBXO45P0C2W1 286 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
SEC22A-202ENST00000466519 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
SEC22A-202ENST00000466519 EPS15P42566 896 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
SEC22A-202ENST00000466519 FLIIQ13045 1269 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 NR1H3Q13133 447 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 CC2D1BQ5T0F9 858 aaKnown RBP8.11□□□□□ -1.11
SEC22A-202ENST00000466519 CST9Q5W186 159 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 CYP4F22Q6NT55 531 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
SEC22A-202ENST00000466519 PSMD1Q99460 953 aa8.11□□□□□ -1.11
SEC22A-202ENST00000466519 TIAM2Q8IVF5 1701 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 TRAF5O00463 557 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 NR3C2P08235 984 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 TIMP2P16035 220 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
SEC22A-202ENST00000466519 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
SEC22A-202ENST00000466519 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
SEC22A-202ENST00000466519 HLFQ16534 295 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
SEC22A-202ENST00000466519 NBPF15Q8N660 670 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 PHACTR3Q96KR7 559 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 CEMIPQ8WUJ3 1361 aa8.1□□□□□ -1.11
SEC22A-202ENST00000466519 AOC2O75106 756 aa8.09□□□□□ -1.11
SEC22A-202ENST00000466519 MAP2K2P36507 400 aa8.09□□□□□ -1.11
SEC22A-202ENST00000466519 SCNN1DP51172 638 aa8.09□□□□□ -1.11
SEC22A-202ENST00000466519 TRIM26Q12899 539 aaPredicted RBP8.09□□□□□ -1.11
SEC22A-202ENST00000466519 CRY2Q49AN0 593 aa8.09□□□□□ -1.11
SEC22A-202ENST00000466519 USP50Q70EL3 339 aaPredicted RBP8.09□□□□□ -1.11
SEC22A-202ENST00000466519 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
SEC22A-202ENST00000466519 AFDNP55196 1824 aaKnown RBP8.08□□□□□ -1.12
SEC22A-202ENST00000466519 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 DLEC1Q9Y238 1755 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 CA12O43570 354 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 ZIC2O95409 532 aaPredicted RBP8.08□□□□□ -1.12
SEC22A-202ENST00000466519 CNGB1Q14028 1251 aaPredicted RBP8.08□□□□□ -1.12
SEC22A-202ENST00000466519 KLF16Q9BXK1 252 aaPredicted RBP8.08□□□□□ -1.12
SEC22A-202ENST00000466519 PCGF6Q9BYE7 350 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 MCOLN1Q9GZU1 580 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 ATP13A2Q9NQ11 1180 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 PCDHB9Q9Y5E1 797 aa8.08□□□□□ -1.12
SEC22A-202ENST00000466519 SCN11AQ9UI33 1791 aa8.07□□□□□ -1.12
SEC22A-202ENST00000466519 TCERG1O14776 1098 aaKnown RBP8.07□□□□□ -1.12
SEC22A-202ENST00000466519 CELF2O95319 508 aaKnown RBP8.07□□□□□ -1.12
SEC22A-202ENST00000466519 HOXA10P31260 410 aaPredicted RBP8.07□□□□□ -1.12
SEC22A-202ENST00000466519 PRKAR2BP31323 418 aa8.07□□□□□ -1.12
SEC22A-202ENST00000466519 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
SEC22A-202ENST00000466519 MCM10Q7L590 875 aa8.07□□□□□ -1.12
SEC22A-202ENST00000466519 SAPCD2Q86UD0 394 aa8.07□□□□□ -1.12
SEC22A-202ENST00000466519 NIM1KQ8IY84 436 aa8.07□□□□□ -1.12
SEC22A-202ENST00000466519 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
SEC22A-202ENST00000466519 RPGRQ92834 1020 aaKnown RBP8.07□□□□□ -1.12
SEC22A-202ENST00000466519 NYXQ9GZU5 481 aa8.07□□□□□ -1.12
SEC22A-202ENST00000466519 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
SEC22A-202ENST00000466519 ADARB2Q9NS39 739 aaKnown RBP8.07□□□□□ -1.12
SEC22A-202ENST00000466519 KIF7Q2M1P5 1343 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 SLX4Q8IY92 1834 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 SNED1Q8TER0 1413 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 SLC51AQ86UW1 340 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 ITPKCQ96DU7 683 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 RBM17Q96I25 401 aaKnown RBP8.06□□□□□ -1.12
SEC22A-202ENST00000466519 CRAMP1Q96RY5 1269 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 GPRC5DQ9NZD1 345 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 DACH1Q9UI36 760 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 FER1L6Q2WGJ9 1857 aa8.06□□□□□ -1.12
SEC22A-202ENST00000466519 COL11A2P13942 1736 aaPredicted RBP8.06□□□□□ -1.12
SEC22A-202ENST00000466519 ANKRD31Q8N7Z5 1873 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 ESPNB1AK53 854 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 PPIP5K2O43314 1243 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 CXCL9Q07325 125 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 DGKZQ13574 1117 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 DCTN1Q14203 1278 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 TAF7Q15545 349 aaPredicted RBP8.05□□□□□ -1.12
SEC22A-202ENST00000466519 AOC3Q16853 763 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 PPP1R26Q5T8A7 1209 aaPredicted RBP8.05□□□□□ -1.12
SEC22A-202ENST00000466519 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
SEC22A-202ENST00000466519 HHIPL1Q96JK4 782 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms