RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ECM29Q5VYK3 1845 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 IGSF3O75054 1194 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 LDHBP07195 334 aaKnown RBP12.05□□□□□ -0.48
PMF1-204ENST00000466489 EPS15P42566 896 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 MRE11P49959 708 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 RASGRF1Q13972 1273 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 LDHDQ86WU2 507 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 ANTXR1Q9H6X2 564 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
PMF1-204ENST00000466489 TTF2Q9UNY4 1162 aaKnown RBP12.05□□□□□ -0.48
PMF1-204ENST00000466489 AKAP11Q9UKA4 1901 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 F8W031 263 aaPredicted RBP12.04□□□□□ -0.48
PMF1-204ENST00000466489 ERC2O15083 957 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 TOMM70O94826 608 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.48
PMF1-204ENST00000466489 ZNF280AP59817 542 aaPredicted RBP12.04□□□□□ -0.48
PMF1-204ENST00000466489 TTF1Q15361 905 aaPredicted RBP12.04□□□□□ -0.48
PMF1-204ENST00000466489 DLGAP5Q15398 846 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 KIF4BQ2VIQ3 1234 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
PMF1-204ENST00000466489 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
PMF1-204ENST00000466489 TEKT1Q969V4 418 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 GMLQ99445 158 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 CWC22Q9HCG8 908 aaKnown RBP12.04□□□□□ -0.48
PMF1-204ENST00000466489 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 LRP2BPQ9P2M1 347 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.04□□□□□ -0.48
PMF1-204ENST00000466489 MAST2Q6P0Q8 1798 aa12.04□□□□□ -0.48
PMF1-204ENST00000466489 MYH2Q9UKX2 1941 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 KIF3CO14782 793 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 EPB41L2O43491 1005 aaKnown RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 SMARCA5O60264 1052 aaPredicted RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 HSP90AA1P07900 732 aaKnown RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 MCAMP43121 646 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 GSTO1P78417 241 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 HDLBPQ00341 1268 aaKnown RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 RBM26Q5T8P6 1007 aaKnown RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.03□□□□□ -0.48
PMF1-204ENST00000466489 NOL10Q9BSC4 688 aaKnown RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 MXD3Q9BW11 206 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 TLR7Q9NYK1 1049 aaKnown RBP12.03□□□□□ -0.48
PMF1-204ENST00000466489 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
PMF1-204ENST00000466489 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.48
PMF1-204ENST00000466489 POTECB2RU33 542 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 LDHCP07864 332 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 MCM4P33991 863 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 MCM2P49736 904 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 TMED8Q6PL24 325 aaPredicted RBP12.02□□□□□ -0.49
PMF1-204ENST00000466489 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 CERS5Q8N5B7 392 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 DCPSQ96C86 337 aaKnown RBP12.02□□□□□ -0.49
PMF1-204ENST00000466489 TMOD2Q9NZR1 351 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
PMF1-204ENST00000466489 MYH7P12883 1935 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 ATP5JP18859 108 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 MX1P20591 662 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 NUCB2P80303 420 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 FSTL1Q12841 308 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 MAP3K12Q12852 859 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 LRRFIP1Q32MZ4 808 aaKnown RBP12.01□□□□□ -0.49
PMF1-204ENST00000466489 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 MTMR14Q8NCE2 650 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
PMF1-204ENST00000466489 MRIQ9BWK5 157 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.01□□□□□ -0.49
PMF1-204ENST00000466489 SNRKQ9NRH2 765 aa12.01□□□□□ -0.49
PMF1-204ENST00000466489 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
PMF1-204ENST00000466489 ADAMTSL1Q8N6G6 1762 aa12□□□□□ -0.49
PMF1-204ENST00000466489 DOCK2Q92608 1830 aa12□□□□□ -0.49
PMF1-204ENST00000466489 CDC45O75419 566 aa12□□□□□ -0.49
PMF1-204ENST00000466489 GLRX3O76003 335 aaKnown RBP12□□□□□ -0.49
PMF1-204ENST00000466489 REC8O95072 547 aa12□□□□□ -0.49
PMF1-204ENST00000466489 CRKP46108 304 aa12□□□□□ -0.49
PMF1-204ENST00000466489 RABEP1Q15276 862 aa12□□□□□ -0.49
PMF1-204ENST00000466489 CFAP100Q494V2 611 aa12□□□□□ -0.49
PMF1-204ENST00000466489 HHIPL2Q6UWX4 724 aa12□□□□□ -0.49
PMF1-204ENST00000466489 APOBEC3FQ8IUX4 373 aaKnown RBP12□□□□□ -0.49
PMF1-204ENST00000466489 SULF1Q8IWU6 871 aa12□□□□□ -0.49
PMF1-204ENST00000466489 TRPM4Q8TD43 1214 aa12□□□□□ -0.49
PMF1-204ENST00000466489 LNPKQ9C0E8 428 aa12□□□□□ -0.49
PMF1-204ENST00000466489 PITPNM2Q9BZ72 1349 aa12□□□□□ -0.49
PMF1-204ENST00000466489 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
PMF1-204ENST00000466489 AK9Q5TCS8 1911 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 SHTN1A0MZ66 631 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 IDH1O75874 414 aaKnown RBP11.99□□□□□ -0.49
PMF1-204ENST00000466489 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
PMF1-204ENST00000466489 PRDX5P30044 214 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 ZAP70P43403 619 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 TNFAIP1Q13829 316 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms