RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 NPHP1O15259 732 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 FLT3P36888 993 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 PRSS12P56730 875 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 IRX3P78415 501 aaPredicted RBP5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 CTDSPL2Q05D32 466 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 TTF1Q15361 905 aaPredicted RBP5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 GRAMD1BQ3KR37 738 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 HSCBQ8IWL3 235 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 C1orf216Q8TAB5 229 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 CD248Q9HCU0 757 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 RGPD1P0DJD0 1748 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 RIMS1Q86UR5 1692 aaKnown RBP5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 TOPAZ1Q8N9V7 1692 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 EVC2Q86UK5 1308 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 SPTLC1O15269 473 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 C21orf2O43822 256 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 NR1I2O75469 434 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 SLC34A2O95436 690 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 MYL1P05976 194 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 NAT1P18440 290 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 DAB2P98082 770 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 BRD3Q15059 726 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 TUSC1Q2TAM9 212 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 RPAINQ86UA6 219 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 ARHGAP45Q92619 1136 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 TMEM87BQ96K49 555 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 LGR6Q9HBX8 967 aa5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 DNMT3AQ9Y6K1 912 aaPredicted RBP5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 YTHDC2Q9H6S0 1430 aaKnown RBP5.29□□□□□ -1.56
CLCA3P-202ENST00000466454 NRXN3Q9Y4C0 1643 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 TSPAN7P41732 249 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 MCL1Q07820 350 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 PPP4R4Q6NUP7 873 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 SPICE1Q8N0Z3 855 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 LILRB2Q8N423 598 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 TCP11L2Q8N4U5 519 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 CERKQ8TCT0 537 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 FRAT1Q92837 279 aaPredicted RBP5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 ZNF700Q9H0M5 742 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 KMT5AQ9NQR1 393 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 AATKQ6ZMQ8 1374 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 CTSHP09668 335 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 ATF4P18848 351 aaPredicted RBP5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 PSMD2Q13200 908 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 CFAP53Q96M91 514 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 PNNQ9H307 717 aaKnown RBP5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 NGRNQ9NPE2 291 aaKnown RBP5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 CDK12Q9NYV4 1490 aaPredicted RBP5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 DLG5Q8TDM6 1919 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 TECPR2O15040 1411 aa5.28□□□□□ -1.56
CLCA3P-202ENST00000466454 PRPF3O43395 683 aaKnown RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 SLC10A3P09131 477 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 PPP2R5AQ15172 486 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 UVSSAQ2YD98 709 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 GAS2L2Q8NHY3 880 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 SLC39A7Q92504 469 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 TRIM44Q96DX7 344 aaPredicted RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 SRPK1Q96SB4 655 aaKnown RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 EYA1Q99502 592 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 ZNF69Q9UC07 566 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 CPSF1Q10570 1443 aaKnown RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 CPS1P31327 1500 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 GEMIN4P57678 1058 aaKnown RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 MORC1Q86VD1 984 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 ZSCAN29Q8IWY8 852 aaPredicted RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 FRS2Q8WU20 508 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 IP6K2Q9UHH9 426 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 IBTKQ9P2D0 1353 aaPredicted RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 PPP1R12AO14974 1030 aaPredicted RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 TREHO43280 583 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 SORBS3O60504 671 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 MYL3P08590 195 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 ALKBH2Q6NS38 261 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 POTEEQ6S8J3 1075 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 TTC8Q8TAM2 541 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 FAM174AQ8TBP5 190 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 HELQQ8TDG4 1101 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 ZNF408Q9H9D4 720 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 SEPT3Q9UH03 358 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 PNMA3Q9UL41 463 aa5.27□□□□□ -1.57
CLCA3P-202ENST00000466454 A0A1W2PP64 1363 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 MAP2P11137 1827 aaKnown RBP5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 KCNQ2O43526 872 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 RNF40O75150 1001 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 IGHA2P01877 340 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 RLBP1P12271 317 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 NBPF6Q5VWK0 638 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 NBPF5PQ86XG9 351 aaPredicted RBP5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 TEX19Q8NA77 164 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 RDH13Q8NBN7 331 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 TTC13Q8NBP0 860 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 VPS37AQ8NEZ2 397 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 NBPF4Q96M43 638 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 KCNK17Q96T54 332 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 SLX1AQ9BQ83 275 aa5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 EVLQ9UI08 416 aaPredicted RBP5.26□□□□□ -1.57
CLCA3P-202ENST00000466454 DDX19BQ9UMR2 479 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms