RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 MBD4O95243 580 aa14.53□□□□□ -0.08
VPS16-206ENST00000466415 MECOMQ03112 1051 aa14.53□□□□□ -0.08
VPS16-206ENST00000466415 PTH1RQ03431 593 aa14.53□□□□□ -0.08
VPS16-206ENST00000466415 RNF20Q5VTR2 975 aa14.53□□□□□ -0.08
VPS16-206ENST00000466415 TTLL5Q6EMB2 1281 aa14.53□□□□□ -0.08
VPS16-206ENST00000466415 SLF2Q8IX21 1173 aa14.53□□□□□ -0.08
VPS16-206ENST00000466415 NIM1KQ8IY84 436 aa14.53□□□□□ -0.08
VPS16-206ENST00000466415 NSUN4Q96CB9 384 aaKnown RBP14.53□□□□□ -0.08
VPS16-206ENST00000466415 NOL10Q9BSC4 688 aaKnown RBP14.53□□□□□ -0.08
VPS16-206ENST00000466415 ZNF277Q9NRM2 450 aaPredicted RBP14.53□□□□□ -0.08
VPS16-206ENST00000466415 RBM8AQ9Y5S9 174 aaKnown RBP14.53□□□□□ -0.08
VPS16-206ENST00000466415 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
VPS16-206ENST00000466415 MAGEB6P1A0A0J9YX57 407 aa14.52□□□□□ -0.09
VPS16-206ENST00000466415 LDHCP07864 332 aa14.52□□□□□ -0.09
VPS16-206ENST00000466415 IARSP41252 1262 aaKnown RBP14.52□□□□□ -0.09
VPS16-206ENST00000466415 MIGA1Q8NAN2 632 aa14.52□□□□□ -0.09
VPS16-206ENST00000466415 DDRGK1Q96HY6 314 aa14.52□□□□□ -0.09
VPS16-206ENST00000466415 DSCC1Q9BVC3 393 aa14.52□□□□□ -0.09
VPS16-206ENST00000466415 MYO5AQ9Y4I1 1855 aaKnown RBP14.52□□□□□ -0.09
VPS16-206ENST00000466415 USP17L3A6NCW0 530 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 USP17L4A6NCW7 530 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 ZKSCAN1P17029 563 aaPredicted RBP14.51□□□□□ -0.09
VPS16-206ENST00000466415 GNAT2P19087 354 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 HSPA4P34932 840 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 ANAPC15P60006 121 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 USP17L1Q7RTZ2 530 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 MAP4K1Q92918 833 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 ARMT1Q9H993 441 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 SUGT1Q9Y2Z0 365 aa14.51□□□□□ -0.09
VPS16-206ENST00000466415 CCDC88AQ3V6T2 1871 aa14.5□□□□□ -0.09
VPS16-206ENST00000466415 APPP05067 770 aa14.5□□□□□ -0.09
VPS16-206ENST00000466415 HSPD1P10809 573 aaKnown RBP14.5□□□□□ -0.09
VPS16-206ENST00000466415 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
VPS16-206ENST00000466415 STRIP1Q5VSL9 837 aa14.5□□□□□ -0.09
VPS16-206ENST00000466415 CTNNA3Q9UI47 895 aa14.5□□□□□ -0.09
VPS16-206ENST00000466415 ARFGEF1Q9Y6D6 1849 aa14.5□□□□□ -0.09
VPS16-206ENST00000466415 MROH7-TTC4A0A0A0MT08 1334 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 LTBP3Q9NS15 1303 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 F8W031 263 aaPredicted RBP14.49□□□□□ -0.09
VPS16-206ENST00000466415 NFKBIEO00221 500 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 BAG3O95817 575 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 FKBP1AP62942 108 aaKnown RBP14.49□□□□□ -0.09
VPS16-206ENST00000466415 RABEP1Q15276 862 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 CREB3L3Q68CJ9 461 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 LCORLQ8N3X6 602 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 JDP2Q8WYK2 163 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 NACAP1Q9BZK3 213 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 SLC4A4Q9Y6R1 1079 aa14.49□□□□□ -0.09
VPS16-206ENST00000466415 FER1L6Q2WGJ9 1857 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 SLC27A2O14975 620 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 RASSF7Q02833 373 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 GRIK5Q16478 980 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 ADGRA1Q86SQ6 560 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 CERS3Q8IU89 383 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 STRBPQ96SI9 672 aaKnown RBP14.48□□□□□ -0.09
VPS16-206ENST00000466415 SYT17Q9BSW7 474 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 CRNKL1Q9BZJ0 848 aaKnown RBP14.48□□□□□ -0.09
VPS16-206ENST00000466415 AATFQ9NY61 560 aaKnown RBP eCLIP14.48□□□□□ -0.09
VPS16-206ENST00000466415 PALD1Q9ULE6 856 aa14.48□□□□□ -0.09
VPS16-206ENST00000466415 TTF2Q9UNY4 1162 aaKnown RBP14.48□□□□□ -0.09
VPS16-206ENST00000466415 RPAP1Q9BWH6 1393 aaPredicted RBP14.47□□□□□ -0.09
VPS16-206ENST00000466415 MYO3BQ8WXR4 1341 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 TDO2P48775 406 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 DYNLL1P63167 89 aaKnown RBP14.47□□□□□ -0.09
VPS16-206ENST00000466415 BECN1Q14457 450 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 NECTIN1Q15223 517 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 DIXDC1Q155Q3 683 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 IMMTQ16891 758 aaKnown RBP14.47□□□□□ -0.09
VPS16-206ENST00000466415 DACT2Q5SW24 774 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 CERS5Q8N5B7 392 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 ZNF384Q8TF68 577 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 RIOK1Q9BRS2 568 aaKnown RBP14.47□□□□□ -0.09
VPS16-206ENST00000466415 NAPBQ9H115 298 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 DAXXQ9UER7 740 aaPredicted RBP14.47□□□□□ -0.09
VPS16-206ENST00000466415 ZNRF3Q9ULT6 936 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 SNX14Q9Y5W7 946 aa14.47□□□□□ -0.09
VPS16-206ENST00000466415 YDJCA8MPS7 323 aa14.46□□□□□ -0.09
VPS16-206ENST00000466415 PATL2C9JE40 543 aaKnown RBP14.46□□□□□ -0.09
VPS16-206ENST00000466415 SOCS7O14512 581 aa14.46□□□□□ -0.09
VPS16-206ENST00000466415 BTDP43251 543 aa14.46□□□□□ -0.09
VPS16-206ENST00000466415 KRT32Q14532 448 aa14.46□□□□□ -0.09
VPS16-206ENST00000466415 ARHGAP27Q6ZUM4 889 aa14.46□□□□□ -0.09
VPS16-206ENST00000466415 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
VPS16-206ENST00000466415 KCNQ5Q9NR82 932 aa14.46□□□□□ -0.09
VPS16-206ENST00000466415 ZMYM6O95789 1325 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 CHD4Q14839 1912 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 ST18O60284 1047 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 RAD17O75943 681 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 PLCG2P16885 1265 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 PSMA5P28066 241 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 KIAA0825Q8IV33 1275 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 TEKT1Q969V4 418 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 JAKMIP1Q96N16 626 aaKnown RBP14.45□□□□□ -0.1
VPS16-206ENST00000466415 KIF2CQ99661 725 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 COL4A5P29400 1685 aa14.45□□□□□ -0.1
VPS16-206ENST00000466415 GAKO14976 1311 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 PSMD14O00487 310 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 ZNF213O14771 459 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 PRKAB2O43741 272 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms