RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 CCT4P50991 539 aaKnown RBP8.72□□□□□ -1.01
CLDN4-204ENST00000466411 CRHR2Q13324 411 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 MRPL50Q8N5N7 158 aaKnown RBP8.72□□□□□ -1.01
CLDN4-204ENST00000466411 PI4KAP1Q8N8J0 262 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 SSH1Q8WYL5 1049 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
CLDN4-204ENST00000466411 PHAXQ9H814 394 aaKnown RBP8.72□□□□□ -1.01
CLDN4-204ENST00000466411 ABCC4O15439 1325 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 UBN2Q6ZU65 1347 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 SH3TC1Q8TE82 1336 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 SYNGAP1Q96PV0 1343 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 NCOR1O75376 2440 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 PIEZO1Q92508 2521 aa8.72□□□□□ -1.01
CLDN4-204ENST00000466411 SSC5DA1L4H1 1573 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 MANSC4A6NHS7 340 aaPredicted RBP8.71□□□□□ -1.02
CLDN4-204ENST00000466411 BBOX1O75936 387 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 MYCP01106 439 aaPredicted RBP8.71□□□□□ -1.02
CLDN4-204ENST00000466411 ANXA1P04083 346 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 BCAMP50895 628 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 MTFR1Q15390 333 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 SUSD4Q5VX71 490 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 NLRP10Q86W26 655 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 SP7Q8TDD2 431 aaPredicted RBP8.71□□□□□ -1.02
CLDN4-204ENST00000466411 SH3TC2Q8TF17 1288 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 SNX27Q96L92 541 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 GMLQ99445 158 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 PTPN18Q99952 460 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 ISCA1Q9BUE6 129 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 HTATIP2Q9BUP3 242 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 SRCIN1Q9C0H9 1055 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 DBNDD1Q9H9R9 158 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 TRMT112Q9UI30 125 aaKnown RBP8.71□□□□□ -1.02
CLDN4-204ENST00000466411 RPTORQ8N122 1335 aa8.71□□□□□ -1.02
CLDN4-204ENST00000466411 DDX60Q8IY21 1712 aaKnown RBP8.71□□□□□ -1.02
CLDN4-204ENST00000466411 TESPA1A2RU30 521 aaPredicted RBP8.7□□□□□ -1.02
CLDN4-204ENST00000466411 NTSR2O95665 410 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 PCCAP05165 728 aaPredicted RBP8.7□□□□□ -1.02
CLDN4-204ENST00000466411 GJA8P48165 433 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 SLC10A5Q5PT55 438 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 ZKSCAN2Q63HK3 967 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 ATF7IPQ6VMQ6 1270 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 TMC4Q7Z404 712 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 FTSJ3Q8IY81 847 aaKnown RBP8.7□□□□□ -1.02
CLDN4-204ENST00000466411 ZBTB38Q8NAP3 1195 aaPredicted RBP8.7□□□□□ -1.02
CLDN4-204ENST00000466411 SLC39A7Q92504 469 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 YTHDC1Q96MU7 727 aaKnown RBP8.7□□□□□ -1.02
CLDN4-204ENST00000466411 MYD88Q99836 296 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 RCAN3Q9UKA8 241 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 LRRC37AA6NMS7 1700 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 ZSWIM8A7E2V4 1837 aa8.7□□□□□ -1.02
CLDN4-204ENST00000466411 NEURL1BA8MQ27 555 aa8.69□□□□□ -1.02
CLDN4-204ENST00000466411 DSG2Q14126 1118 aa8.69□□□□□ -1.02
CLDN4-204ENST00000466411 NLRP3Q96P20 1036 aa8.69□□□□□ -1.02
CLDN4-204ENST00000466411 TMX4Q9H1E5 349 aaPredicted RBP8.69□□□□□ -1.02
CLDN4-204ENST00000466411 C9orf78Q9NZ63 289 aaPredicted RBP8.69□□□□□ -1.02
CLDN4-204ENST00000466411 CDH23Q9H251 3354 aa8.69□□□□□ -1.02
CLDN4-204ENST00000466411 PSME4Q14997 1843 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 SEC24BO95487 1268 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 GJB1P08034 283 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 ZBTB48P10074 688 aaPredicted RBP8.68□□□□□ -1.02
CLDN4-204ENST00000466411 GPTP24298 496 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 GJA5P36382 358 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 GCKRQ14397 625 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 MAP3K11Q16584 847 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 FAM109BQ6ICB4 259 aaPredicted RBP8.68□□□□□ -1.02
CLDN4-204ENST00000466411 POLLQ9UGP5 575 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
CLDN4-204ENST00000466411 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
CLDN4-204ENST00000466411 GRM8O00222 908 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 ECE2O60344 883 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 GNAI3P08754 354 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 AAMPQ13685 434 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 PDE3AQ14432 1141 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 CCDC152Q4G0S7 254 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 BEND3Q5T5X7 828 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 SLC4A10Q6U841 1118 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 G2E3Q7L622 706 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 FRAT1Q92837 279 aaPredicted RBP8.67□□□□□ -1.02
CLDN4-204ENST00000466411 WNK4Q96J92 1243 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 PLA2G12BQ9BX93 195 aa8.67□□□□□ -1.02
CLDN4-204ENST00000466411 NOB1Q9ULX3 412 aaKnown RBP8.67□□□□□ -1.02
CLDN4-204ENST00000466411 COL2A1P02458 1487 aaPredicted RBP8.66□□□□□ -1.02
CLDN4-204ENST00000466411 UTYO14607 1347 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 C2orf72A6NCS6 295 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 G3V3G9 751 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 IRS4O14654 1257 aaPredicted RBP8.66□□□□□ -1.02
CLDN4-204ENST00000466411 SEMA3EO15041 775 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 PDE8AO60658 829 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 IGKV5-2P06315 115 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 C7P10643 843 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 FOXK1P85037 733 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 MAP3K12Q12852 859 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms