RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 HTATSF1O43719 755 aaKnown RBP8.45□□□□□ -1.06
TPM3-214ENST00000466010 U2AF1L5P0DN76 240 aaPredicted RBP8.45□□□□□ -1.06
TPM3-214ENST00000466010 PRKAR2BP31323 418 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 MAPK8P45983 427 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 HDLBPQ00341 1268 aaKnown RBP8.45□□□□□ -1.06
TPM3-214ENST00000466010 U2AF1Q01081 240 aaKnown RBP eCLIP8.45□□□□□ -1.06
TPM3-214ENST00000466010 PLCB3Q01970 1234 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 AMIGO3Q86WK7 504 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 TMEM87AQ8NBN3 555 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 RTF1Q92541 710 aaKnown RBP8.45□□□□□ -1.06
TPM3-214ENST00000466010 SPATA32Q96LK8 384 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 KCTD15Q96SI1 283 aaPredicted RBP8.45□□□□□ -1.06
TPM3-214ENST00000466010 LGR6Q9HBX8 967 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 USP42Q9H9J4 1324 aaKnown RBP8.45□□□□□ -1.06
TPM3-214ENST00000466010 CEMIPQ8WUJ3 1361 aa8.45□□□□□ -1.06
TPM3-214ENST00000466010 A0A087WZG4 1122 aa8.44□□□□□ -1.06
TPM3-214ENST00000466010 SORBS3O60504 671 aa8.44□□□□□ -1.06
TPM3-214ENST00000466010 GYS1P13807 737 aa8.44□□□□□ -1.06
TPM3-214ENST00000466010 CNGB1Q14028 1251 aaPredicted RBP8.44□□□□□ -1.06
TPM3-214ENST00000466010 RALBP1Q15311 655 aa8.44□□□□□ -1.06
TPM3-214ENST00000466010 ZNF790Q6PG37 636 aa8.44□□□□□ -1.06
TPM3-214ENST00000466010 METTL5Q9NRN9 209 aaKnown RBP8.44□□□□□ -1.06
TPM3-214ENST00000466010 CHD4Q14839 1912 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 TMEM229AB2RXF0 380 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 SMARCA5O60264 1052 aaPredicted RBP8.43□□□□□ -1.06
TPM3-214ENST00000466010 CYP19A1P11511 503 aaPredicted RBP8.43□□□□□ -1.06
TPM3-214ENST00000466010 GDF10P55107 478 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 CC2D2BQ6DHV5 1058 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 INTS5Q6P9B9 1019 aaKnown RBP8.43□□□□□ -1.06
TPM3-214ENST00000466010 DNAJC10Q8IXB1 793 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
TPM3-214ENST00000466010 PIK3R5Q8WYR1 880 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 MARVELD3Q96A59 401 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 FMNL2Q96PY5 1086 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 SOS1Q07889 1333 aaPredicted RBP8.43□□□□□ -1.06
TPM3-214ENST00000466010 C10orf71Q711Q0 1435 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 KCPQ6ZWJ8 1503 aa8.43□□□□□ -1.06
TPM3-214ENST00000466010 BTBD11A6QL63 1104 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 EIF1AXP47813 144 aaKnown RBP8.42□□□□□ -1.06
TPM3-214ENST00000466010 EHHADHQ08426 723 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 PSMD2Q13200 908 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 SLC39A6Q13433 755 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 IL17REQ8NFR9 667 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 VTI1BQ9UEU0 232 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 NARFQ9UHQ1 456 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 CHMP3Q9Y3E7 222 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 COL15A1P39059 1388 aa8.42□□□□□ -1.06
TPM3-214ENST00000466010 TJP1Q07157 1748 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 HEG1Q9ULI3 1381 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 PPP1R12BO60237 982 aaPredicted RBP8.41□□□□□ -1.06
TPM3-214ENST00000466010 ST18O60284 1047 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
TPM3-214ENST00000466010 ERVK-9P63128 1117 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 INTS6LQ5JSJ4 861 aaKnown RBP8.41□□□□□ -1.06
TPM3-214ENST00000466010 VASH1Q7L8A9 365 aaPredicted RBP8.41□□□□□ -1.06
TPM3-214ENST00000466010 TMC4Q7Z404 712 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 PNISRQ8TF01 805 aaKnown RBP8.41□□□□□ -1.06
TPM3-214ENST00000466010 RNF34Q969K3 372 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 PHACTR3Q96KR7 559 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
TPM3-214ENST00000466010 TANGO6Q9C0B7 1094 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 TSPAN10Q9H1Z9 355 aaPredicted RBP8.41□□□□□ -1.06
TPM3-214ENST00000466010 CCSER2Q9H7U1 834 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 STIM2Q9P246 746 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 FCF1Q9Y324 198 aaKnown RBP8.41□□□□□ -1.06
TPM3-214ENST00000466010 MAP4K5Q9Y4K4 846 aa8.41□□□□□ -1.06
TPM3-214ENST00000466010 UBR2Q8IWV8 1755 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 C4AP0C0L4 1744 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 PXDNLA1KZ92 1463 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 MAPK8IP3Q9UPT6 1336 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 ERVH48-1M5A8F1 160 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 NCLP19338 710 aaKnown RBP8.4□□□□□ -1.06
TPM3-214ENST00000466010 IL6STP40189 918 aaPredicted RBP8.4□□□□□ -1.06
TPM3-214ENST00000466010 SCTRP47872 440 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 GNL2Q13823 731 aaKnown RBP8.4□□□□□ -1.06
TPM3-214ENST00000466010 DSC3Q14574 896 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 C9orf131Q5VYM1 1079 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 NT5DC4Q86YG4 428 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 ALKBH8Q96BT7 664 aaKnown RBP8.4□□□□□ -1.06
TPM3-214ENST00000466010 ZNF496Q96IT1 587 aaPredicted RBP8.4□□□□□ -1.06
TPM3-214ENST00000466010 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 MTRQ99707 1265 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 PDZRN3Q9UPQ7 1066 aa8.4□□□□□ -1.06
TPM3-214ENST00000466010 MYH14Q7Z406 1995 aaKnown RBP8.39□□□□□ -1.07
TPM3-214ENST00000466010 KIF13BQ9NQT8 1826 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 INHAP05111 366 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 SNRPA1P09661 255 aaKnown RBP8.39□□□□□ -1.07
TPM3-214ENST00000466010 TM4SF1P30408 202 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 SCNN1DP51172 638 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 EIF5P55010 431 aaKnown RBP8.39□□□□□ -1.07
TPM3-214ENST00000466010 SH3BP2P78314 561 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 DAB2P98082 770 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
TPM3-214ENST00000466010 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 TAF7Q15545 349 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms