RNA–Protein interactions for RNA: ENST00000465997.1

SNX21-207, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-207ENST00000465997 HHIPL2Q6UWX4 724 aa17.15■□□□□ 0.34
SNX21-207ENST00000465997 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
SNX21-207ENST00000465997 FAM155AB1AL88 458 aaPredicted RBP17.14■□□□□ 0.33
SNX21-207ENST00000465997 SLC10A3P09131 477 aa17.14■□□□□ 0.33
SNX21-207ENST00000465997 TNNI2P48788 182 aa17.14■□□□□ 0.33
SNX21-207ENST00000465997 TTLL12Q14166 644 aaPredicted RBP17.14■□□□□ 0.33
SNX21-207ENST00000465997 POLA2Q14181 598 aa17.14■□□□□ 0.33
SNX21-207ENST00000465997 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
SNX21-207ENST00000465997 ZGPATQ8N5A5 531 aaKnown RBP17.14■□□□□ 0.33
SNX21-207ENST00000465997 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
SNX21-207ENST00000465997 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
SNX21-207ENST00000465997 ZNF70Q9UC06 446 aaPredicted RBP17.14■□□□□ 0.33
SNX21-207ENST00000465997 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
SNX21-207ENST00000465997 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
SNX21-207ENST00000465997 PCNTO95613 3336 aa17.14■□□□□ 0.33
SNX21-207ENST00000465997 A0A1B0GUL7 405 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 PPP1R12BO60237 982 aaPredicted RBP17.13■□□□□ 0.33
SNX21-207ENST00000465997 RLBP1P12271 317 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 TFCP2Q12800 502 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 COL13A1Q5TAT6 717 aaPredicted RBP17.13■□□□□ 0.33
SNX21-207ENST00000465997 PRAMEF18Q5VWM3 479 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 CCDC102BQ68D86 513 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 VEZTQ9HBM0 779 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 SCAF8Q9UPN6 1271 aaKnown RBP17.13■□□□□ 0.33
SNX21-207ENST00000465997 PCDHAC2Q9Y5I4 1007 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 MYH13Q9UKX3 1938 aa17.13■□□□□ 0.33
SNX21-207ENST00000465997 CLRN2A0PK11 232 aa17.12■□□□□ 0.33
SNX21-207ENST00000465997 TIMM10P62072 90 aa17.12■□□□□ 0.33
SNX21-207ENST00000465997 MAP3K11Q16584 847 aa17.12■□□□□ 0.33
SNX21-207ENST00000465997 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
SNX21-207ENST00000465997 FKBP1CQ5VVH2 108 aa17.12■□□□□ 0.33
SNX21-207ENST00000465997 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
SNX21-207ENST00000465997 GPR108Q9NPR9 543 aa17.12■□□□□ 0.33
SNX21-207ENST00000465997 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
SNX21-207ENST00000465997 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
SNX21-207ENST00000465997 PHKA1P46020 1223 aa17.11■□□□□ 0.33
SNX21-207ENST00000465997 RASA3Q14644 834 aa17.11■□□□□ 0.33
SNX21-207ENST00000465997 GRIK5Q16478 980 aa17.11■□□□□ 0.33
SNX21-207ENST00000465997 LDLRAD1Q5T700 205 aa17.11■□□□□ 0.33
SNX21-207ENST00000465997 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
SNX21-207ENST00000465997 TMOD2Q9NZR1 351 aa17.11■□□□□ 0.33
SNX21-207ENST00000465997 LDHBP07195 334 aaKnown RBP17.1■□□□□ 0.33
SNX21-207ENST00000465997 HSPA8P11142 646 aaKnown RBP17.1■□□□□ 0.33
SNX21-207ENST00000465997 LBX1P52954 281 aa17.1■□□□□ 0.33
SNX21-207ENST00000465997 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
SNX21-207ENST00000465997 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
SNX21-207ENST00000465997 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
SNX21-207ENST00000465997 RASAL3Q86YV0 1011 aa17.1■□□□□ 0.33
SNX21-207ENST00000465997 NEUROD6Q96NK8 337 aa17.1■□□□□ 0.33
SNX21-207ENST00000465997 SAGE1Q9NXZ1 904 aa17.1■□□□□ 0.33
SNX21-207ENST00000465997 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
SNX21-207ENST00000465997 ADORA1P30542 326 aa17.09■□□□□ 0.33
SNX21-207ENST00000465997 IREB2P48200 963 aaKnown RBP17.09■□□□□ 0.33
SNX21-207ENST00000465997 FAM83AQ86UY5 434 aa17.09■□□□□ 0.33
SNX21-207ENST00000465997 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
SNX21-207ENST00000465997 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
SNX21-207ENST00000465997 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
SNX21-207ENST00000465997 HOOK2Q96ED9 719 aa17.09■□□□□ 0.33
SNX21-207ENST00000465997 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
SNX21-207ENST00000465997 ANGEL1Q9UNK9 670 aaKnown RBP17.09■□□□□ 0.33
SNX21-207ENST00000465997 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
SNX21-207ENST00000465997 UQCRFS1P1P0C7P4 283 aa17.08■□□□□ 0.32
SNX21-207ENST00000465997 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.32
SNX21-207ENST00000465997 APOBEC3HQ6NTF7 200 aaKnown RBP17.08■□□□□ 0.32
SNX21-207ENST00000465997 MOB2Q70IA6 237 aa17.08■□□□□ 0.32
SNX21-207ENST00000465997 PANK1Q8TE04 598 aa17.08■□□□□ 0.32
SNX21-207ENST00000465997 AOX1Q06278 1338 aa17.07■□□□□ 0.32
SNX21-207ENST00000465997 IGSF3O75054 1194 aa17.07■□□□□ 0.32
SNX21-207ENST00000465997 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
SNX21-207ENST00000465997 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
SNX21-207ENST00000465997 SLC10A4Q96EP9 437 aa17.07■□□□□ 0.32
SNX21-207ENST00000465997 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
SNX21-207ENST00000465997 ZIC5Q96T25 663 aa17.07■□□□□ 0.32
SNX21-207ENST00000465997 TCP10L2B9ZVM9 353 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 PRDX5P30044 214 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 RASGRF1Q13972 1273 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 PRKG1Q13976 671 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 HSP90AB4PQ58FF6 505 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 FAM163AQ96GL9 167 aaPredicted RBP17.06■□□□□ 0.32
SNX21-207ENST00000465997 TEPSINQ96N21 525 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
SNX21-207ENST00000465997 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
SNX21-207ENST00000465997 ARID4AP29374 1257 aaPredicted RBP17.05■□□□□ 0.32
SNX21-207ENST00000465997 TM4SF4P48230 202 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 INHBEP58166 350 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 SREBF2Q12772 1141 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 TNNI3KQ59H18 835 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 ANKRD13AQ8IZ07 590 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 DAGLAQ9Y4D2 1042 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 FPGT-TNNI3KV9GXZ4 949 aa17.05■□□□□ 0.32
SNX21-207ENST00000465997 SSC5DA1L4H1 1573 aa17.04■□□□□ 0.32
SNX21-207ENST00000465997 ZBTB48P10074 688 aaPredicted RBP17.04■□□□□ 0.32
SNX21-207ENST00000465997 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
SNX21-207ENST00000465997 DZIP1Q86YF9 867 aaKnown RBP17.04■□□□□ 0.32
SNX21-207ENST00000465997 SPATA5Q8NB90 893 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms