RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
CACNA1C-224ENST00000465934 ATP2B3Q16720 1220 aa17.51■□□□□ 0.39
CACNA1C-224ENST00000465934 TBC1D22AQ8WUA7 517 aa17.51■□□□□ 0.39
CACNA1C-224ENST00000465934 COPRSQ9NQ92 184 aa17.51■□□□□ 0.39
CACNA1C-224ENST00000465934 SAGE1Q9NXZ1 904 aa17.51■□□□□ 0.39
CACNA1C-224ENST00000465934 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
CACNA1C-224ENST00000465934 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
CACNA1C-224ENST00000465934 TCP10L2B9ZVM9 353 aa17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 GNAI3P08754 354 aa17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 ADORA1P30542 326 aa17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 CACNB3P54284 484 aa17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 ABHD8Q96I13 439 aa17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 CLMNQ96JQ2 1002 aa17.5■□□□□ 0.39
CACNA1C-224ENST00000465934 PHKA1P46020 1223 aa17.49■□□□□ 0.39
CACNA1C-224ENST00000465934 TMEM57Q8N5G2 664 aa17.49■□□□□ 0.39
CACNA1C-224ENST00000465934 HDAC5Q9UQL6 1122 aa17.49■□□□□ 0.39
CACNA1C-224ENST00000465934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.49■□□□□ 0.39
CACNA1C-224ENST00000465934 ARAP2Q8WZ64 1704 aa17.49■□□□□ 0.39
CACNA1C-224ENST00000465934 MTX1Q13505 466 aa17.48■□□□□ 0.39
CACNA1C-224ENST00000465934 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
CACNA1C-224ENST00000465934 SUPT20HL1Q3ZLR7 823 aa17.48■□□□□ 0.39
CACNA1C-224ENST00000465934 TEKT1Q969V4 418 aa17.48■□□□□ 0.39
CACNA1C-224ENST00000465934 TEPSINQ96N21 525 aa17.48■□□□□ 0.39
CACNA1C-224ENST00000465934 TMEM39BQ9GZU3 492 aa17.48■□□□□ 0.39
CACNA1C-224ENST00000465934 PPP1R12BO60237 982 aaPredicted RBP17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 TNFAIP1Q13829 316 aa17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 SPRYD7Q5W111 196 aa17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 ZKSCAN2Q63HK3 967 aa17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 ZDHHC15Q96MV8 337 aa17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 MCOLN1Q9GZU1 580 aa17.47■□□□□ 0.39
CACNA1C-224ENST00000465934 PNMA6EA0A0J9YXQ4 647 aa17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 USP2O75604 605 aaPredicted RBP17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 GNAI2P04899 355 aa17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 PRDX5P30044 214 aa17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 TIMM10P62072 90 aa17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 TFCP2Q12800 502 aa17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 WDR66Q8TBY9 1149 aa17.46■□□□□ 0.39
CACNA1C-224ENST00000465934 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.38
CACNA1C-224ENST00000465934 ECM29Q5VYK3 1845 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 TBC1D8O95759 1140 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 TM4SF4P48230 202 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 DGKZQ13574 1117 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 DIXDC1Q155Q3 683 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 CCDC102BQ68D86 513 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 SLC10A4Q96EP9 437 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
CACNA1C-224ENST00000465934 RLBP1P12271 317 aa17.44■□□□□ 0.38
CACNA1C-224ENST00000465934 GJA5P36382 358 aa17.44■□□□□ 0.38
CACNA1C-224ENST00000465934 WNK4Q96J92 1243 aa17.44■□□□□ 0.38
CACNA1C-224ENST00000465934 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
CACNA1C-224ENST00000465934 GNL3LQ9NVN8 582 aaKnown RBP17.44■□□□□ 0.38
CACNA1C-224ENST00000465934 MAST3O60307 1309 aa17.44■□□□□ 0.38
CACNA1C-224ENST00000465934 CASP8AP2Q9UKL3 1982 aa17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 A0A1B0GUL7 405 aa17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 IREB2P48200 963 aaKnown RBP17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 RASGRF1Q13972 1273 aa17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 R3HDMLQ9H3Y0 253 aa17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 C1orf115Q9H7X2 142 aa17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 DAGLAQ9Y4D2 1042 aa17.43■□□□□ 0.38
CACNA1C-224ENST00000465934 TNNI2P48788 182 aa17.42■□□□□ 0.38
CACNA1C-224ENST00000465934 SREBF2Q12772 1141 aa17.42■□□□□ 0.38
CACNA1C-224ENST00000465934 XAGE2Q96GT9 111 aa17.42■□□□□ 0.38
CACNA1C-224ENST00000465934 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
CACNA1C-224ENST00000465934 DENND2AQ9ULE3 1009 aa17.42■□□□□ 0.38
CACNA1C-224ENST00000465934 CCDC85CA6NKD9 419 aa17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 SEMA3EO15041 775 aa17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 LDHBP07195 334 aaKnown RBP17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 ANKRD13AQ8IZ07 590 aa17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 TMOD2Q9NZR1 351 aa17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 SALL1Q9NSC2 1324 aa17.41■□□□□ 0.38
CACNA1C-224ENST00000465934 ZBTB48P10074 688 aaPredicted RBP17.4■□□□□ 0.38
CACNA1C-224ENST00000465934 VGLL4Q14135 290 aa17.4■□□□□ 0.38
CACNA1C-224ENST00000465934 CDC42EP5Q6NZY7 148 aa17.4■□□□□ 0.38
CACNA1C-224ENST00000465934 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
CACNA1C-224ENST00000465934 ZNF296Q8WUU4 475 aaPredicted RBP17.4■□□□□ 0.38
CACNA1C-224ENST00000465934 MANSC4A6NHS7 340 aaPredicted RBP17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 NFIAQ12857 509 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 POLA2Q14181 598 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 FKBP1CQ5VVH2 108 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 PI16Q6UXB8 463 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 FAM83AQ86UY5 434 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 IFNL1Q8IU54 200 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 OPTNQ96CV9 577 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 AKAP2Q9Y2D5 859 aa17.39■□□□□ 0.37
CACNA1C-224ENST00000465934 TCP10Q12799 353 aa17.38■□□□□ 0.37
CACNA1C-224ENST00000465934 G3BP1Q13283 466 aaKnown RBP eCLIP17.38■□□□□ 0.37
CACNA1C-224ENST00000465934 MVPQ14764 893 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms