RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
NPHP3-203ENST00000465756 CRKP46108 304 aa13.13□□□□□ -0.31
NPHP3-203ENST00000465756 HHIPL1Q96JK4 782 aa13.13□□□□□ -0.31
NPHP3-203ENST00000465756 GMLQ99445 158 aa13.13□□□□□ -0.31
NPHP3-203ENST00000465756 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
NPHP3-203ENST00000465756 POTECB2RU33 542 aa13.12□□□□□ -0.31
NPHP3-203ENST00000465756 FKBP1CQ5VVH2 108 aa13.12□□□□□ -0.31
NPHP3-203ENST00000465756 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
NPHP3-203ENST00000465756 CA12O43570 354 aa13.12□□□□□ -0.31
NPHP3-203ENST00000465756 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
NPHP3-203ENST00000465756 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
NPHP3-203ENST00000465756 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
NPHP3-203ENST00000465756 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 GLIS2Q9BZE0 524 aaPredicted RBP13.11□□□□□ -0.31
NPHP3-203ENST00000465756 TAF1P21675 1872 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 HUNKP57058 714 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 NOGQ13253 232 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 TXNRD3Q86VQ6 643 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 GCC1Q96CN9 775 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 SPATA5Q8NB90 893 aa13.11□□□□□ -0.31
NPHP3-203ENST00000465756 PNMA6EA0A0J9YXQ4 647 aa13.1□□□□□ -0.31
NPHP3-203ENST00000465756 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
NPHP3-203ENST00000465756 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
NPHP3-203ENST00000465756 RLBP1P12271 317 aa13.1□□□□□ -0.31
NPHP3-203ENST00000465756 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
NPHP3-203ENST00000465756 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
NPHP3-203ENST00000465756 CSADQ9Y600 493 aa13.1□□□□□ -0.31
NPHP3-203ENST00000465756 NAA16Q6N069 864 aaPredicted RBP13.1□□□□□ -0.31
NPHP3-203ENST00000465756 TIMM10P62072 90 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 APBB1O00213 710 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 WNT10BO00744 389 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 KLRK1P26718 216 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 PHKA1P46020 1223 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 ZSCAN29Q8IWY8 852 aaPredicted RBP13.09□□□□□ -0.31
NPHP3-203ENST00000465756 ZDHHC15Q96MV8 337 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 MAP2K2P36507 400 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPHP3-203ENST00000465756 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
NPHP3-203ENST00000465756 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
NPHP3-203ENST00000465756 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-203ENST00000465756 ARID4AP29374 1257 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-203ENST00000465756 FAM83AQ86UY5 434 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 ZNF70Q9UC06 446 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-203ENST00000465756 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 SREBF2Q12772 1141 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 GRM1Q13255 1194 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 RGMBQ6NW40 437 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 JAG2Q9Y219 1238 aa13.08□□□□□ -0.32
NPHP3-203ENST00000465756 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
NPHP3-203ENST00000465756 ZNF157P51786 506 aaPredicted RBP13.07□□□□□ -0.32
NPHP3-203ENST00000465756 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
NPHP3-203ENST00000465756 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
NPHP3-203ENST00000465756 SNAP23O00161 211 aa13.07□□□□□ -0.32
NPHP3-203ENST00000465756 SLC10A4Q96EP9 437 aa13.07□□□□□ -0.32
NPHP3-203ENST00000465756 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
NPHP3-203ENST00000465756 USP40Q9NVE5 1235 aa13.07□□□□□ -0.32
NPHP3-203ENST00000465756 ENTPD3O75355 529 aa13.06□□□□□ -0.32
NPHP3-203ENST00000465756 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
NPHP3-203ENST00000465756 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
NPHP3-203ENST00000465756 CNTNAP1P78357 1384 aa13.06□□□□□ -0.32
NPHP3-203ENST00000465756 CLRN2A0PK11 232 aa13.06□□□□□ -0.32
NPHP3-203ENST00000465756 ZNF341Q9BYN7 854 aa13.06□□□□□ -0.32
NPHP3-203ENST00000465756 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
NPHP3-203ENST00000465756 CCDC8Q9H0W5 538 aaPredicted RBP13.06□□□□□ -0.32
NPHP3-203ENST00000465756 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
NPHP3-203ENST00000465756 ANGEL1Q9UNK9 670 aaKnown RBP13.06□□□□□ -0.32
NPHP3-203ENST00000465756 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 PSME4Q14997 1843 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 ADM5C9JUS6 153 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 ALDH1A1P00352 501 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 ADORA1P30542 326 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 INHBEP58166 350 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 NBPF9Q3BBW0 867 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 FAM151AQ8WW52 585 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
NPHP3-203ENST00000465756 COL4A5P29400 1685 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 ZFYP08048 801 aaPredicted RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 RASA3Q14644 834 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 MROH7-TTC4A0A0A0MT08 1334 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 WDR33Q9C0J8 1336 aaKnown RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 RPAP1Q9BWH6 1393 aaPredicted RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms